| Co-Expression Analysis of: | CYP81D3 (At4g37340) | Institut de Biologie Moléculaire des Plantes |
|
_____________________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Hormones etc. Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(treatment/control)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | ethylene, 3h, petiole (13) | mock, 30min, seedling (110) | IAA, 30min, seedling (110) | IAA, 1h, seedling (110) | IAA, 3h, seedling (110) | zeatin, 30min, seedling (110) | zeatin, 1h, seedling (110) | zeatin, 3h, seedling (110) | GA3, 30min, seedling (110) | GA3, 1h, seedling (110) | GA3, 3h, seedling (110) | ABA, 30min, seedling (110) | ABA, 1h, seedling (110) | ABA, 3h, seedling (110) | MJ, 30min, seedling (110) | MJ, 1h, seedling (110) | MJ, 3h, seedling (110) | ACC, 30min, seedling (110) | ACC, 1h, seedling (110) | ACC, 3h, seedling (110) | BL, 30min, seedling (110) | BL, 1h, seedling (110) | BL, 3h, seedling (110) | ABA, 3 uM, imbided seed (116) | ABA, 30 uM, imbided seed (116) | GA, 3h, imbibed seed (119) | GA, 6h, imbibed seed (119) | GA, 9h, imbibed seed (119) | GA, 3h, imbibed seed (134) | GA, 6h, imbibed seed (134) | GA, 9h, imbibed seed (134) | GA, 30min, whole plant (99) | GA, 60min, whole plant (99) | GA, 3h, whole plant (99) | IAA, 0.1uM, 1h, seedling (144) | IAA, 0.1uM, 3h, seedling (144) | IAA, 1uM, 1h, seedling (144) | IAA, 1uM, 3h, seedling (144) | ppi, 3h, seedling (113) | ppi, 12h, seedling (113) | uni, 3h, seedling (113) | uni, 12h, seedling (113) | brz220, 3h, seedling (113) | brz220, 12h, seedling (113) | brz91, 3h, seedling (113) | brz91, 12h, seedling (113) | pac, 3h, seedling (113) | pac, 12h, seedling (113) | px, 3h, seedling (113) | px, 12h, seedling (113) | pno8, 3h, seedling (113) | pno8, 12h, seedling (113) | ibup, 3h, seedling (113) | B9, 3h, seedling (113) | AgNO3, 3h, seedling (113) | AVG, 3h, seedling (113) | Sal, 3h, seedling (113) | MG132, 3h, seedling (113) | 246T, 3h, seedling (113) | PCIB, 3h, seedling (113) | TIBA, 3h, seedling (113) | NPA, 3h, seedling (113) | CHX, 3h, seedling (113) | Colm, 3h, seedling (113) | ColPNO8, 3h, seedling (113) | ColBrz, 3h, seedling (113) | glucose, 8h, seedling (14) | sucrose, 8h, seedling (15) | deoxyglucose, 8h_seedling (14) | methylglucose, 8h, seedling (14) | K depleted, whole rosette (97) | K depleted, root (97) | Sulfate depleted, 2h, root (112) | Sulfate depleted, 4h, root (112) | Sulfate depleted, 8h, root (112) | Sulfate depleted, 12h, root (112) | Sulfate depleted, 24h, root (112) | mannitol, 8h, seedling (14) | CO2, 1000ppm, guard cell enriched (11) | CO2, 1000ppm, mature leaf (11) | CO2, high light, whole rosette (95) | CO2, medium light, whole rosette (95) | CO2, low light, whole rosette (95) | CO2, 2h, juvenile leaf (151) | CO2, 4h, juvenile leaf (151) | CO2, 6h, juvenile leaf (151) | CO2, 12h, juvenile leaf (151) | CO2, 24h, juvenile leaf (151) | CO2, 48h, juvenile leaf (151) | dark, 45min, seedling (109) | dark, 4h, seedling (109) | far red, 45min, seedling (109) | far red, 4h, seedling (109) | red pulse1, seedling (109) | red pulse2, seedling (109) | red, 45min, seedling (109) | red, 4h, seedling (109) | blue, 45min, seedling (109) | blue, 4h, seedling (109) | UV-A pulse1, seedling (109) | UV-A pulse2, seedling (109) | UV-AB pulse1, seedling (109) | UV-AB pulse2, seedling (109) | UV-A, 18h, mature leaf (72) | UV-B, 18h, mature leaf (72) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At4g37340 | 1.000 | CYP81D3 | cytochrome P450 family protein | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.42 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.27 | -0.19 | -0.22 | 0.16 | 0.37 | 0.49 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | At4g37340 | 253098_at | CYP81D3 | cytochrome P450 family protein | 1 | biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids | cytochrome P450 family | 0.00 | 0.91 | ||||||
| At3g49190 | 0.571 | condensation domain-containing protein | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.42 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.27 | -0.34 | 0.16 | 0.43 | -0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | At3g49190 | 252302_at | condensation domain-containing protein | 2 | Fatty acid elongation and wax and cutin metabolism | 0.00 | 0.85 | |||||||||
| At5g17040 | 0.552 | UDP-glucoronosyl/UDP-glucosyl transferase family protein, similar to UDP glucose:flavonoid 3-o-glucosyltransferase (Vitis vinifera) | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.42 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 1.35 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | At5g17040 | 246419_at (m) | UDP-glucoronosyl/UDP-glucosyl transferase family protein, similar to UDP glucose:flavonoid 3-o-glucosyltransferase (Vitis vinifera) | 1 | C-compound and carbohydrate utilization | Flavonoid biosynthesis | Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism | Glycosyl transferase, Family 1 | 0.00 | 1.77 | ||||||
| At3g12070 | 0.533 | geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | 0.33 | 0.57 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | 0.71 | -0.02 | 0.16 | -0.02 | -0.17 | -0.06 | 0 | -0.17 | -0.06 | 0 | -0.02 | -0.02 | -0.02 | -0.02 | 0.19 | -0.02 | -0.44 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | 0.8 | -0.05 | -0.63 | 1 | 0.61 | 0.04 | -0.02 | -0.81 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | At3g12070 | 256276_at | geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative | 4 | Glycan Biosynthesis and Metabolism | N-Glycan biosynthesis | Isoprenoid Biosynthesis in the Cytosol and in Mitochondria | Protein prenylation | protein prenylation | 0.36 | 1.81 | |||||||
| At1g17960 | 0.515 | Similar to Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) from Arabidopsis thaliana | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | -0.89 | -0.89 | -0.89 | -1.3 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | -0.01 | -0.48 | -0.54 | -0.15 | 0.04 | 0.66 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.73 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | At1g17960 | 255893_at | Similar to Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) from Arabidopsis thaliana | 4 | tRNA charging pathway | 0.45 | 2.03 | |||||||||
| At5g16230 | 0.507 | similar to Acyl-(acyl-carrier protein) desaturase from Spinacia oleracea | -0.01 | -0.01 | -0.01 | -0.17 | -0.01 | 0.48 | 0.28 | -0.01 | -0.01 | -0.21 | 0.26 | -0.01 | -0.17 | -0.01 | -0.01 | -0.17 | -0.01 | -0.01 | -0.17 | -0.01 | -0.01 | -0.17 | 0.19 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.21 | 0.11 | -0.21 | -0.63 | 0.34 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 0.38 | -0.01 | 0.54 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 0.26 | -0.4 | 0.02 | 0.37 | 0.06 | 0.31 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | At5g16230 | 246498_at | similar to Acyl-(acyl-carrier protein) desaturase from Spinacia oleracea | 4 | lipid, fatty acid and isoprenoid biosynthesis | biogenesis of chloroplast | Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid | Synthesis of fatty acids in plastids | 0.48 | 1.17 | |||||||
| page created by Juergen Ehlting | 06/28/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||