Co-Expression Analysis of: CYP83B1, SUR2, RNT1, RED1, ATR4 (At4g31500) Institut de Biologie Moléculaire des Plantes











































































































































_____________________________________________
____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________

________________________ _____________________________________________ CYPedia Home






















































































































































Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At4g31500 1.000 CYP83B1 cytochrome P450 family protein. Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. 0.49 2 1.07 1.58 -0.1 -0.16 0.14 -0.03 0.47 0 0.39 -0.38 -0.18 -1.32 -0.79 0.23 0 -0.05 -0.52 -0.98 -0.69 -0.23 1.15 0.35 -0.04 -0.07 0.51 0.2 0.02 1.03 0 -0.02 0.93 0.21 0.02 0.26 0.43 0.04 0.27 0.06 0.06 0.06 0.06 -0.54 0.79 2.69 -1.03 -1.05 -0.93 -0.63 -0.9 -0.04 -0.6 0 0.62 0.03 0.3 -0.12 -0.01 -0.02 0.26 0.2 0.5 1.77 -0.67 -0.7 -0.51 -0.46 -0.56 -0.36 -0.26 0.74 0.59 -0.05 -0.45 -1.21 -2.11 -2.87 -0.55 -0.22 -0.28 0.14 -0.93 0.11 -0.12 0.66 0.05 1.15 1.5 1.44 -0.43 0.3 -0.26 0.04 -0.07 -0.15 0.2 0.74 -0.17 -0.56 -0.63 0.05 -0.51 -1.4 -0.79 0.17 -0.14 -0.13 0.32 0.02 0.44 0.23 -0.51 -1.51 0.39 0.26 0.93 0.56 1.87 0.44 -0.89 -0.03 0.12 0.37 0.31 1.31 0.88 0.07 0.06 0.12 -0.03 -0.32 0.06 0.06 -0.15 -1.14 0.21 -0.13 -3.16 -2.18 0.34 0.1 1.9 0.53 At4g31500 253534_at CYP83B1 cytochrome P450 family protein. Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. 10 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD or NADH as one donor, and incorporation of one atom of oxygen | indole glucosinolate biosynthesis | indoleacetic acid biosynthesis | shade avoidance | tryptophan biosynthesis | response to red light
glucosinolate biosynthesis from phenylalanine | glucosinolate biosynthesis from tryptophan


Glucosinolate Metabolism cytochrome P450 family, oxidation of indole-3-acetyldoxime, indole glucosinolate biosynthesis 2.63 5.85
At4g39950 0.766 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxinme (IAOx), a precursor to IAA and indole glucosinolates. 0.14 1.56 1 3.39 -0.44 -0.48 0.06 -0.08 0.76 -0.21 0.36 -0.56 -0.36 -1.49 0.13 -0.1 0.31 -0.17 -0.21 -1.75 -1.6 0.81 0.4 -0.01 0.67 -0.66 0.22 -0.15 -0.48 0.33 -1.1 -0.69 0.84 -0.26 0.07 -0.23 0.91 -0.97 -0.67 -0.24 -0.24 -0.24 -0.24 -0.42 1.1 2.06 -0.97 -0.91 -0.81 -0.88 -0.73 -0.54 -0.63 -0.2 0.22 -0.06 -0.06 -0.43 -0.47 0.18 1.02 1.23 1.77 3 -0.52 -0.48 -0.52 -0.47 -0.32 -0.06 -0.42 0.56 0.56 -0.44 -0.35 -1.89 -2.04 -3.5 0.43 -0.8 -0.33 -0.31 -1.23 -0.36 -0.28 1 1.23 -0.02 4.18 4.38 -0.83 -0.03 -0.42 -0.13 0.21 -0.39 0.07 1.29 0.13 -0.16 -0.64 0.28 -0.31 -0.24 -0.51 0.28 -0.05 -0.06 0.34 0.23 -0.71 -0.3 -0.52 -0.76 0.69 -0.24 2.56 -0.01 1.22 0.05 -0.23 -0.2 -0.3 -0.44 -0.01 0.09 0.11 0.24 -0.24 -0.17 -0.11 -0.16 -0.24 -0.24 0 0.47 0.03 0.74 -2.65 -0.82 0.67 0.27 1.8 0.53 At4g39950 252827_at CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxinme (IAOx), a precursor to IAA and indole glucosinolates. 10 tryptophan catabolism
IAA biosynthesis I | glucosinolate biosynthesis from tryptophan Ascorbate and aldarate metabolism | Stilbene, coumarine and lignin biosynthesis | gamma-Hexachlorocyclohexane degradation | Fluorene degradation

Glucosinolate Metabolism cytochrome P450 family, conversion of tryptophan, tryptophan analogs to oxime, indole glucosinolate biosynthesis 2.95 7.88
At1g74100 0.744
sulfotransferase family protein, similar to Flavonol 4'-sulfotransferase from Flaveria chloraefolia -0.31 1.53 0.65 0.01 -0.28 -0.07 0.6 -0.4 0.07 0 0.19 -0.19 -0.09 -0.73 -0.32 -0.15 -0.35 -0.04 -0.28 -1.15 -0.96 0.17 1.02 0.2 0.04 0.03 0.6 0.06 -0.88 0.3 -0.2 0.04 0.89 -0.24 -0.64 -0.28 0.28 0.02 -0.25 -0.07 -0.07 -0.07 -0.07 -1.44 0.63 1.71 -0.09 -0.66 -0.32 -0.47 -0.12 -0.23 -0.42 -1.09 0.47 -0.25 -0.3 -0.14 -0.09 0.12 0.43 -0.01 0.44 1.65 -0.13 -0.14 -0.35 -0.27 -0.14 -0.37 0.15 0.24 -0.01 0.1 -0.52 -0.68 -1.59 -1.32 0.1 0.01 -0.05 0.19 -0.19 -0.48 -0.03 0.2 -0.14 0.77 1.62 1.79 -0.57 0.05 -0.19 -0.23 -0.25 -0.23 0.07 1.22 0.42 0.6 -0.15 1.23 -1.08 -0.64 -0.14 0.1 -0.31 -0.18 -0.03 -0.19 0.21 -0.12 -0.12 -0.75 0.03 0 0.28 0.33 1.06 0.52 0.64 0.08 -0.04 0.27 0.19 3.17 0.21 -0.19 -0.07 -0.05 -0.09 -0.06 -0.47 -0.41 0.01 0.18 -0.12 -0.06 -1.54 -1.14 0.26 0.37 0.61 0.21 At1g74100 260387_at
sulfotransferase family protein, similar to Flavonol 4'-sulfotransferase from Flaveria chloraefolia 10

glucosinolate biosynthesis from phenylalanine
Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism
Glucosinolate Metabolism
2.25 4.76
At4g30530 0.701
strong similarity to defense-related protein (Brassica carinata) -0.14 0.77 -0.22 1.3 -0.18 0.01 0.21 -0.21 0.06 0.06 -0.25 -0.06 -0.13 -0.36 -0.9 -0.28 -0.56 0.14 0.19 -0.43 -0.38 0.38 1.06 0.22 -0.35 -0.31 0.1 -0.05 -0.05 0.38 -0.46 -0.07 1.01 -0.16 -0.64 0.06 0.17 -0.09 -0.23 -0.08 -0.08 -0.08 -0.08 -0.74 0.55 0.69 -0.19 -0.36 -0.47 -0.54 -0.33 -0.04 -0.43 0.16 0.48 -0.02 0.14 -0.06 -0.21 0.89 1.24 0.82 1.05 1.23 -0.7 -0.55 -0.81 -0.83 -0.8 -0.68 -0.92 0.37 -0.31 -0.25 -0.34 -0.43 -0.88 -0.79 0.02 0.27 -0.18 -0.36 0.1 -0.4 0.1 0.23 -0.01 0.38 1.72 1.66 -0.18 -0.28 -0.21 0.59 0.2 0.18 0.01 0.28 -0.13 0.2 -0.7 0.55 -0.11 -0.24 -0.01 0.03 0.85 0.01 -0.03 0.09 -0.61 -0.14 -0.44 -0.32 0.38 0.32 1.12 0.28 0.68 0.27 0.01 -0.18 0.08 0.05 0.21 1.71 0.45 -0.35 -0.08 -0.04 -0.14 -0.52 -0.41 -0.32 -0.13 -0.28 -0.1 -0.13 -1.78 -0.88 0.38 0.52 0.26 0.34 At4g30530 253606_at
strong similarity to defense-related protein (Brassica carinata) 2

tryptophan biosynthesis | de novo biosynthesis of purine nucleotides I | de novo biosynthesis of purine nucleotides II




1.86 3.50
At5g17990 0.614 TRP1 Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. 0.49 -0.15 0.09 1.68 -0.12 -0.01 0.07 -0.08 0.43 -0.46 -0.47 -0.16 -0.24 -0.24 -0.01 -0.01 -0.02 -0.52 -0.46 -0.25 0.01 0.38 1.28 0.23 0.22 -0.3 0.07 0.23 -0.19 0.48 -0.49 -0.23 0.38 -0.14 -0.27 -0.01 0.17 0.1 -0.14 -0.03 -0.03 -0.03 -0.03 -0.36 0.67 0.41 -0.59 -0.54 -0.75 -0.49 -0.25 -0.13 -0.22 -0.28 0.45 0.06 0.19 0 0.18 0.08 -0.1 -0.18 0.01 1.32 -0.66 -0.77 -0.82 -0.97 -0.68 -0.81 -1.3 -0.07 0.16 -0.27 -0.6 -0.59 -0.28 -1.12 -0.1 -0.08 -0.27 0.06 -0.63 0.09 -0.42 1.11 -0.28 0.18 2.88 3.03 -0.02 0.24 -0.04 -0.17 -0.04 0.18 -0.04 0.06 -0.04 -0.62 0.28 0.01 -0.46 -1.04 -0.17 -0.04 0.2 0.34 -0.25 0.35 -0.3 -0.13 -0.48 -0.18 0.25 -0.01 0.75 0.01 0.08 0.21 0.01 0.07 0.18 -0.19 0.11 1.51 0.13 0.12 -0.03 0.22 -0.04 -0.46 -0.19 -0.23 -0.06 0.39 0.19 0.31 -0.56 -0.73 0.54 1.09 0.59 0.67 At5g17990 250014_at TRP1 Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. 10 tryptophan biosynthesis | anthranilate phosphoribosyltransferase activity
tryptophan biosynthesis Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | Trp biosyntesis
1.78 4.33
At1g24100 0.600
UDP-glucoronosyl/UDP-glucosyl transferase family protein 0.22 0.79 0.65 1.18 -0.05 0.17 0.09 -0.45 -0.2 -0.23 0.1 -0.23 0.02 -0.8 -0.71 0.06 -0.36 -0.26 -0.43 -0.72 -0.84 0.62 0.86 -0.05 -0.62 -0.42 0.24 0.31 -0.25 0.44 -0.3 -0.45 0.12 -0.47 -0.19 0.11 0.25 -0.03 -0.32 -0.01 -0.01 -0.01 -0.01 -0.8 1.26 0.44 -0.52 -0.38 -0.25 -0.22 -0.32 0.42 0.35 -0.24 0.17 -0.15 0.06 0.13 0.44 0.86 1.36 0.96 1.22 1.68 -0.66 -0.14 -0.84 -0.91 -0.61 -0.55 -0.38 0.09 0.32 -0.36 -0.55 -0.54 -1.06 -1.2 0.49 -0.11 0.01 -0.09 -0.44 0.19 -0.2 -0.25 0.04 0.81 0.66 0.94 -0.72 -0.61 -0.15 0.36 0.17 -0.09 0.15 0.72 0.53 0.37 0.38 0.74 -0.96 -0.66 -0.39 0.09 -0.7 -0.5 -0.18 -0.05 -0.62 -0.12 -0.84 0.03 0.38 -0.4 1.06 -0.14 0.42 0.27 -0.06 -0.27 0.28 -0.22 0.46 3.57 0.25 -0.48 -0.01 0.37 0.07 -0.17 -0.35 -0.46 -0.19 0.17 -0.16 -0.16 -0.54 -0.33 0.01 0.15 0.56 0.05 At1g24100 264873_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 10





Glucosinolate Metabolism Glycosyl transferase, Family 1 1.76 4.77
At2g30870 0.595 ATGSTF10 early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002) 0.2 0.75 -0.28 3.7 -0.02 0.02 -0.35 0.09 0.19 0 0.08 -0.1 -0.08 0.12 -0.51 0.16 -0.27 0.27 -0.1 0.25 0.26 0.22 0.49 0.44 0.14 0.02 0.34 -0.16 -0.38 0.25 -0.41 -0.32 0.27 0.11 0.03 0.2 -0.14 0.07 -0.06 -0.04 -0.04 -0.04 -0.04 -0.81 0.28 0.79 -0.78 -0.65 -0.34 -0.21 -0.71 -0.67 -0.16 -0.36 -0.14 -0.15 0.03 -0.25 -0.38 -0.04 0.26 0.39 0.13 3.66 -0.76 -0.67 -0.69 -0.89 -0.89 -0.57 -0.37 0.76 -0.35 0.09 -0.22 -0.28 -0.63 -0.91 -0.5 -0.14 -0.09 0.07 -0.46 -0.18 0.19 0.67 -0.26 -0.03 1.08 1.11 0.03 -0.19 -0.19 0.07 0.08 -0.11 -0.05 0.08 -0.59 0.28 -0.88 0.12 -0.28 -0.16 -0.25 0.02 -0.02 0.43 -0.05 0 0.42 -0.19 -0.09 -0.02 0.16 1.47 0.2 0.18 0.18 -0.01 -0.28 -0.05 0.07 -0.08 0.24 0.01 0.22 -0.05 -0.04 0.05 -0.17 -0.62 -0.13 0.11 0.34 0.3 0.53 0.03 -1.04 -1.07 0.05 0.15 0.27 0.25 At2g30870 267154_at (m) ATGSTF10 early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002) 10 response to water deprivation | toxin catabolism

Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism

Glutathione S-transferase, Phi family 1.52 4.77
At2g22330 0.573 CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. -0.4 0.59 0 2.97 0.01 -0.01 -0.13 0.19 -0.45 0.04 0 -0.28 -0.38 -0.17 -0.6 0.36 -0.66 -0.15 -0.84 -0.56 -0.61 -0.37 -0.19 -0.07 0.28 0.17 0.31 0.16 0.68 -0.11 -0.35 -0.22 1.32 -0.59 0.28 -0.23 0.57 -0.35 0.02 0 0 0 0 -0.41 1.7 0 -0.56 -0.77 -0.13 -0.48 -0.43 0.21 0.12 -0.28 0.55 0.23 0.5 0.31 0.37 0.2 0.83 0.91 2.13 1.81 -0.45 -0.45 -0.5 -0.56 -0.68 -0.71 0.02 0.17 0.49 -0.3 -0.71 -0.9 -2.04 -2.94 -0.32 0.18 0.14 0.11 -0.2 0.23 0.18 0.25 1.21 0.07 -1.02 -0.21 -0.06 -0.48 -0.76 -0.26 0.13 0.31 0.71 0.32 -0.16 -0.28 0.38 -0.43 0.12 -1.46 -0.2 0.12 -0.31 -0.89 0.04 -0.21 -0.39 -0.12 -0.34 -0.28 0.42 0 1.11 0.32 1.46 -0.03 -0.32 -0.15 -0.12 0 0.17 1.1 0.09 0.16 0 -0.2 -0.31 -0.16 0 0 0.74 0 0.22 -0.39 0.24 -0.19 0.62 0.12 1.33 0.18 At2g22330 264052_at CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. 10 tryptophan catabolism
IAA biosynthesis I | glucosinolate biosynthesis from tryptophan


Glucosinolate Metabolism cytochrome P450 family, conversion of tryptophan to oxime, indole glucosinolate biosynthesis 1.96 5.90
At4g39940 0.566 AKN2 adenosine-5'-phosphosulfate-kinase -0.35 0.72 -0.25 1.96 -0.21 -0.54 0.56 -0.34 -0.28 -0.12 0.09 -0.39 -0.52 -1.43 -0.4 -0.01 -0.53 -0.07 -0.23 -0.67 -0.55 0.42 0.98 0 -1.32 -0.62 -0.16 0.19 -0.76 0.24 -0.36 -0.35 0.65 -0.62 -0.24 0.03 0.94 -0.38 -0.55 -0.15 -0.15 -0.15 -0.15 -1.23 1.54 1.25 -0.53 -0.85 -0.68 -1.02 -0.59 -0.1 -0.69 -0.91 0.24 -0.01 0.18 -0.07 0.2 1.37 2 1.65 2.52 1.89 -0.91 -0.9 -0.56 -0.77 -0.76 -0.61 -1.18 -0.14 0.56 -0.63 -0.92 -0.93 -0.54 0.17 -0.15 0.13 -0.49 -0.27 -0.17 -0.3 -0.03 -0.23 0.42 0.35 3.82 3.71 -0.51 -0.95 -0.33 0.55 0.3 0.06 0.44 1.22 0.2 -0.44 -0.23 -0.22 -0.5 -0.7 0.04 0.21 -1.02 -0.71 -0.38 0.03 -0.38 -0.21 -0.88 -0.21 0.24 -0.34 0.88 0.26 1.13 -0.4 -0.71 -0.13 -0.07 -0.19 0.41 6.27 0.85 0.18 -0.15 0.22 -0.93 -0.71 -1.21 -0.94 0.5 0.5 0.18 0.08 -1.84 -0.15 0.3 0.54 1.36 -0.22 At4g39940 252870_at AKN2 adenosine-5'-phosphosulfate-kinase 10
nucleotide metabolism
Sulfur metabolism | Purine metabolism | Selenoamino acid metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


2.64 8.11
At2g04400 0.560 IGPS indole-3-glycerol phosphate synthase (IGPS) 0.06 0.26 0.07 -0.13 -0.42 -0.02 -0.06 -0.21 -0.07 -0.02 -0.37 -0.26 0.13 -0.44 -0.28 -0.34 -0.39 -0.03 -0.16 -0.56 -0.48 0.52 1.41 0.36 0.11 0.04 -0.13 0.1 -0.03 0.95 -0.42 0 0.52 -0.2 -0.26 0 -0.16 0.22 0.08 -0.03 -0.03 -0.03 -0.03 -0.71 0.17 -0.03 -0.2 0.05 -0.08 0.08 -0.18 0.07 -0.17 -0.14 0.64 0.03 0.22 -0.26 0.17 -0.12 0.15 -0.07 0.08 -0.2 -0.03 0.23 -0.31 -0.3 -0.02 0.04 -0.97 -0.14 0.32 -0.28 -0.25 -0.34 -0.83 -1.19 -0.37 -0.02 -0.36 -0.3 -0.11 -0.53 0.05 0.68 1.08 0.22 1.23 1.48 -0.27 -0.08 -0.06 0.05 -0.12 0.12 -0.03 0.12 0.28 -0.09 0.05 0.13 -0.61 -0.19 -0.08 0.21 0.71 0.05 0.21 0.17 0.04 -0.05 -0.14 -0.15 0.24 -0.06 0.93 0 -0.01 0.02 -0.05 -0.02 0.18 -0.23 0.19 0.5 0.32 -0.19 -0.03 -0.24 -0.04 -0.07 -0.23 -0.28 -0.05 0.08 -0.04 -0.03 -0.86 -0.43 0.6 0.73 0.63 0.51 At2g04400 263807_at IGPS indole-3-glycerol phosphate synthase (IGPS) 10 indole-3-glycerol-phosphate synthase activity | tryptophan biosynthesis
tryptophan biosynthesis Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | Trp biosyntesis
1.22 2.67
At3g22890 0.556 APS1 encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. -0.1 0.41 0.02 0.03 0.23 0 -0.17 0.16 0.85 -0.06 -0.26 -0.19 -0.01 -0.23 0.18 0.18 0.17 0.05 0.53 -0.1 0 -1.05 1.09 0.4 -1.01 0.27 -0.25 0.17 -0.1 0.27 -0.36 -0.04 0.12 -0.31 -0.4 0.16 0.81 0.2 -0.45 -0.02 -0.02 -0.02 -0.02 -0.68 0.75 1.14 -0.72 -0.45 -0.56 -0.48 -0.53 -0.2 -0.12 -0.71 0.05 0.05 0.02 -0.16 -0.06 1.08 0.85 0.94 0.92 -0.35 -0.64 -0.56 -0.78 -0.78 -0.69 -0.69 -0.85 0.18 -0.17 -0.28 -0.45 -0.23 -0.71 -0.33 0.02 0.11 0 -0.14 -0.16 0.14 0.01 0.12 0.02 0.43 1.74 1.61 0.24 0.45 -0.13 0.31 0.05 0.16 0.11 -0.14 0.02 -0.73 -0.06 -0.19 -0.11 -0.18 -0.25 0.02 -0.34 -0.33 -0.19 -0.13 0.33 0.17 0.19 -0.17 0.42 0.68 0.89 0.03 0.4 -0.25 -0.41 0 -0.02 -0.09 0.13 0.43 0.6 -0.37 -0.02 0.1 -0.37 -0.62 0.11 0.08 0.13 -0.09 0.37 1.06 -1.02 -0.33 0.05 -0.13 0.48 -0.12 At3g22890 256835_at APS1 encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. 6 sulfate adenylyltransferase (ATP) activity
dissimilatory sulfate reduction | sulfate assimilation III
Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


1.63 2.79
At2g06050 0.542 OPR3 Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehisence. -0.2 0.13 0.13 0.49 -0.04 0.2 -0.93 0.06 0.46 -0.37 -0.12 -0.13 0.13 -0.02 0.22 -0.4 -0.22 -0.34 -0.28 -0.27 -0.12 -0.15 0.64 -0.63 0.56 0.78 2.64 0.52 -0.63 1.25 0.38 0.44 0.89 0.32 0.05 0.08 0.52 -0.07 0.64 0.13 0.13 0.13 0.13 -0.42 2.49 0.41 -0.34 -0.2 -0.42 -0.17 -0.4 0.27 0.46 0.64 0.77 0.67 0.76 -0.4 -1.79 -2.59 -2.1 -2.62 -1.93 2 -2.96 -3.14 -3.18 -3.07 -2.96 -2.7 0.13 1.14 -0.27 0.09 0.13 -0.54 -3.94 -5.45 -0.38 0.84 0.35 1.25 -0.7 0.13 0.22 -0.42 -1.05 0.52 5.49 5.19 0.05 0.42 0.08 0.24 0.22 0.23 0.52 1.97 -0.28 0.46 0.09 0.28 0.56 0.13 -0.7 0.5 0.24 1.31 0.1 0.19 0.68 0.21 0.15 -0.43 0.56 0.13 1.22 0.41 0.75 0.09 -0.3 0.28 0.32 0.04 0.27 -0.53 0.36 0.26 0.13 -0.9 0.13 -0.46 -0.11 -0.94 0.56 0.54 0.16 0.34 -1.71 -1.48 1.27 1.37 1.74 1.33 At2g06050 265530_at OPR3 Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehisence. 10 response to wounding | 12-oxophytodienoate reductase activity | jasmonic acid biosynthesis
jasmonic acid biosynthesis

Lipid signaling

4.06 10.95
At1g19670 0.536 ATCLH1 Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. 0.36 0.48 -0.15 2.9 -0.28 -0.02 -1.68 -0.33 -0.55 -0.15 -0.15 -0.15 -0.15 -1.02 -0.25 -0.61 -0.02 -0.37 -0.62 -0.11 -0.13 1.24 0.42 0.72 0.71 -0.3 0.28 0.73 -0.42 0.07 -1.34 -0.52 0.25 0.77 0.2 -0.44 0.33 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -2.95 -0.23 -0.01 0.11 0.41 0.86 0.79 0.85 1.6 0.35 -1.44 0.41 0.38 0.34 -0.57 0.42 0.33 0.11 0.51 0.5 2.15 -1.11 -1.33 -0.57 -1.23 -1.1 -1.61 -0.13 0.26 1.09 -0.15 -0.24 -0.38 -2.5 -1.64 -0.52 0.57 -0.25 0.64 0.13 0.74 -0.15 0.19 -0.62 0.52 0.76 0.72 -0.26 -0.37 -0.07 -0.54 -0.19 0.19 0.38 0.9 0.16 -0.15 -0.94 -0.15 1.21 -0.39 -0.46 0.16 -0.78 -0.25 -0.72 -0.21 -0.41 -0.24 -1.14 -0.67 0.67 -0.15 0.95 1.09 3.22 -0.08 -1.15 0.35 0.05 0.24 0.09 2.81 -0.47 -0.57 -0.15 -1.54 -1.09 -1 -0.31 -0.25 0.21 0.19 -0.04 -0.18 -1.68 -1.43 2.31 3.02 2.02 1.96 At1g19670 255786_at ATCLH1 Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. 10 chlorophyll catabolism | chlorophyllase activity | response to stress


Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll catabolism
3.34 6.17
At3g09940 0.525
similar to monodehydroascorbate reductase (NADH) (Cucumis sativus) -2.38 -0.17 -0.17 3.2 0.35 -0.72 -2.87 -0.17 -0.17 -0.42 0.21 -0.45 -0.21 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.61 1.5 1.93 -0.17 -0.22 0.77 0.67 0.03 1.85 -2.14 -0.17 4.3 -0.17 -0.05 -0.17 -0.17 -0.28 -0.41 -0.17 -0.17 -0.17 -0.17 -3.23 1.75 -0.17 -0.01 -0.12 -0.35 -0.84 -0.43 0.11 -0.38 -0.02 3.44 0.01 0 -0.33 -0.8 -0.17 -0.17 -0.15 -0.17 3.93 -1.06 -1.43 -0.51 -0.9 -1.06 -1.36 -0.2 -0.17 -0.17 -0.25 0.21 -0.44 -3.77 -5.58 -0.17 -0.17 0.39 -0.64 -1.52 -0.6 0.21 0.17 -0.55 0.18 4.5 4.61 -0.17 -0.17 -0.17 -0.37 -0.17 -0.19 -0.17 -0.17 -3.09 -0.85 -1.83 0.37 -3.23 0.16 -0.17 1.34 1.14 1.15 0.41 -0.17 0.8 -0.22 -0.75 -0.2 0.9 -0.17 2.48 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 0.77 -0.17 2.2 -0.06 -0.17 -0.17 2.63 0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 -0.17 1.87 2.79 1.98 2.06 At3g09940 258941_at
similar to monodehydroascorbate reductase (NADH) (Cucumis sativus) 4



Cell Wall Carbohydrate Metabolism | ascorbic acid biosynthesis


4.71 10.19
At1g20510 0.523
4-coumarate--CoA ligase family protein 0.27 -0.25 -0.18 0.93 0.4 -0.25 -0.56 -0.36 0.08 -0.26 -0.31 -0.4 0.06 0.13 0.19 0.15 -0.32 -0.21 -0.57 -0.26 -0.17 -1.07 0.77 -0.94 0.12 0.47 0.99 0.05 -1.5 0.6 -0.52 -0.12 0.17 0.2 -0.03 0.01 0.49 -0.26 0 -0.17 -0.17 -0.17 -0.17 -0.66 0.56 1.11 -0.44 -0.39 -0.3 -0.59 0.03 0.12 -0.83 -0.04 0.05 0.17 0.18 -0.22 -2.49 0.03 0.61 0.19 0.25 1.14 -0.94 -0.93 -0.44 -1.14 -0.39 -0.79 -1.23 1.12 -0.9 -0.19 -0.45 -0.99 -2.04 -1.84 -0.18 -0.09 -0.23 -0.08 -0.26 -0.2 0.1 -0.53 -0.61 0.21 4.76 4.59 0.13 -0.09 -0.35 0 -0.19 -0.03 -0.08 0.86 -0.17 -0.24 0.2 1.44 0.11 0.87 0 0.02 0.26 0.45 0.02 -0.17 -0.12 -0.39 -0.01 -0.99 0.31 -0.18 1 0.31 0.3 0.11 -0.5 0.03 -0.27 -0.1 -0.12 5.01 0.5 -0.61 -0.17 -0.36 0.08 -0.74 -0.45 -0.3 -0.22 -0.07 0.51 0.05 -0.45 -0.42 0.41 0.97 1.53 0.59 At1g20510 259518_at
4-coumarate--CoA ligase family protein 2

lignin biosynthesis | flavonoid biosynthesis


Phenylpropanoid pathway Acyl activating enzymes , CoA ligases, clade IV, 4-coumarate-CoA ligase like 2.09 7.50
At1g78280 0.521
transcription factor jumonji (jmjC) domain-containing protein -0.27 0.28 0.12 -0.02 0.11 -0.1 -0.38 -0.33 0.15 -0.28 -0.14 0.16 0.39 -0.01 0.44 -0.1 0.09 -0.04 0.14 0.05 -0.09 -0.61 0.82 0.04 -0.2 0.84 1 -0.08 -0.37 0.25 0.06 0.38 0.4 -0.1 -0.25 -0.17 0.25 0 -0.13 -0.03 -0.03 -0.03 -0.03 -0.85 0.33 0.14 -0.41 0.03 -0.15 -0.17 -0.81 0.61 -0.16 -0.7 -0.11 0.28 0.18 0.14 -0.47 0.16 -0.04 0.35 -0.04 0.32 -0.34 -0.16 -0.34 -0.63 -0.02 0.05 -0.01 0.32 -0.21 -0.11 -0.28 -0.51 -2.12 -1.72 0 -0.03 -0.09 -0.05 0.03 0.03 0.09 -0.39 -0.46 0.64 2.15 2.08 -0.15 -0.08 -0.09 0.08 0.17 0.07 0.15 -0.05 0.01 -0.52 -0.01 0 -0.46 -0.05 -0.51 -0.03 1.63 0.08 -0.18 -0.08 -0.27 -0.27 0.12 -0.79 -0.25 0.64 -0.27 0.07 0.42 -0.38 -0.04 -0.02 -0.14 -0.3 -0.25 2.58 0.08 -0.04 -0.03 -0.3 0.09 -0.32 0.23 0.35 0.22 -0.22 0.07 0.17 -0.96 0.39 0.1 0.02 0.59 0.06 At1g78280 260798_at
transcription factor jumonji (jmjC) domain-containing protein 1






Glycosyl transferase, Family 1 1.26 4.69
At3g54640 0.509 TSA1 tryptophan synthase, alpha subunit (TSA1), Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2). 0.17 0.11 -0.08 0.25 -0.25 -0.15 0.25 0.02 -0.02 -0.24 0 -0.31 -0.06 -0.04 -0.36 0.08 -0.12 0.2 -0.13 -0.27 -0.41 0.39 1.68 0.37 0.01 -0.2 -0.27 0.1 -0.01 0.78 -0.72 -0.39 0.46 0.03 -0.19 0.21 -0.15 0.04 -0.2 -0.17 -0.17 -0.17 -0.17 -0.68 -0.05 0.34 -0.16 -0.13 -0.22 -0.03 0.01 -0.05 -0.63 -0.42 0.36 -0.28 -0.27 -0.33 -0.04 0.14 0.16 0.03 -0.24 -0.01 -0.17 -0.21 -0.2 -0.25 -0.11 -0.11 -1.13 -0.1 -0.17 -0.4 -0.59 -0.45 0.41 -0.16 -0.68 -0.56 -0.44 -0.38 -0.44 -0.73 -0.32 1.21 0.12 0.13 1.62 1.85 0 0.22 -0.25 -0.24 -0.04 -0.39 -0.13 0.23 0.16 0.03 -0.26 0.51 0 -0.52 0.43 -0.02 1.71 0.01 0.05 0.15 0.47 -0.25 -0.46 -0.31 0.21 -0.33 0.86 -0.26 0.21 -0.38 -0.31 -0.03 0.11 -0.14 0.13 2.97 0.25 -0.26 -0.17 0.25 -0.34 -0.28 -0.24 0.14 -0.55 -0.39 0.16 -0.07 -1.5 -0.79 0.64 1.31 1.44 1.12 At3g54640 251847_at TSA1 tryptophan synthase, alpha subunit (TSA1), Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2). 10 tryptophan synthase activity | tryptophan biosynthesis amino acid metabolism | metabolism of the cysteine - aromatic group

Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | Trp biosyntesis
1.83 4.47
At4g25900 0.506
aldose 1-epimerase family protein, similar to apospory-associated protein C (Chlamydomonas reinhardtii) 0.2 0.83 0.63 1.24 0.07 0.13 -0.21 0.23 0.37 -0.32 -0.26 0.16 0.51 -0.09 -1.05 0.12 -0.5 0.23 -0.21 0.32 0.04 0.52 0.86 0.33 -0.09 0.21 0.06 -0.01 0.15 0.89 -0.28 -0.22 0.14 0.39 -0.53 0.07 0 -0.49 -0.19 -0.02 -0.02 -0.02 -0.02 -0.05 0.03 0.64 -1.08 -1.47 -1.44 -1.48 -1.01 -1.08 -0.67 -0.09 0.36 0.09 0.12 -0.37 -0.71 -0.83 -1 -1.28 -1.04 1.71 -0.62 -0.87 -0.92 -0.82 -0.81 -0.99 -0.66 0.99 0.37 -0.18 -0.28 -0.36 0.15 -0.42 -0.55 0.02 -0.21 0.04 0.39 0.21 0.02 0.82 -0.63 0.09 3.64 3.51 0.24 -0.49 -0.1 0.23 0.06 0.46 -0.22 -0.08 -0.37 -0.14 -0.99 0.14 -0.14 0.07 -0.79 0.18 1.31 0.14 0.09 0.16 0.34 0.13 -0.32 0.18 -0.02 0.65 0.06 0.15 0.91 0.07 0.03 0.08 0.16 -0.02 0.26 0.96 0.07 -0.34 -0.02 0.22 0.83 -0.09 -0.86 -0.37 -0.32 -0.06 0.31 0.05 -0.48 -0.09 0.48 1.03 0.5 0.32 At4g25900 254040_at
aldose 1-epimerase family protein, similar to apospory-associated protein C (Chlamydomonas reinhardtii) 2

non-phosphorylated glucose degradation




1.99 5.12



































































































































































page created by Juergen Ehlting 05/22/06