Co-Expression Analysis of: CYPedia Home Institut de Biologie Moléculaire des Plantes (Home)




CYP86A8 (At2g45970) save all data as Tab Delimited Table










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Pathways co-expressed in all 4 data sets (with more than 6 annotation points each)
Find below a list of pathways that are co-expressed with the bait. First a list of pathways is given that are co-expressed in all data sets. Lists for each individual dataset are shown underneath. Depending on the number of co-expressed pathways only the top scoring pathways are given; all data can be saved as text using the link above.







Pathway Source Sum of scores Sum of genes







Fatty acid elongation and wax and cutin metabolism AcylLipid 58 8







fatty acid metabolism TAIR-GO 54 6
























To the right of each table a thumbnail of the actual co-expression heatmap is given. Klick on the link to see the heatmap containing all co-expressed genes.









































For more information on how these pathway maps were generated please read the methods page
























































Pathways co-expressed in the Organ and Tissue data set (with more than 6 annotation points)
CYP86A8 (At2g45970)







max. difference between log2-ratios: 7.3











max. difference between log2-ratios excluding lowest and highest 5%: 3.6











Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to organ heatmap






Miscellaneous acyl lipid metabolism AcylLipid 40 0.000 10 0.001


Fatty acid elongation and wax and cutin metabolism AcylLipid 22 0.000 4 0.036

sexual reproduction TAIR-GO 20 0.000 5 0.000

fatty acid metabolism TAIR-GO 18 0.000 2 0.000

Cell Wall Carbohydrate Metabolism BioPath 12 0.000 3 0.110










pectin metabolism BioPath 12 0.000 3 0.008










Gluconeogenesis from lipids in seeds BioPath 10 0.000 1 0.055










fatty acid oxidation pathway AraCyc 10 0.000 1 0.002










octane oxidation AraCyc 10 0.000 1 0.001










mono-/sesqui-/di-terpene biosynthesis LitPath 10 0.000 1 0.037










sequiterpene biosynthesis LitPath 10 0.000 1 0.000










terpenoid metabolism LitPath 10 0.000 1 0.039










cellulose biosynthesis AraCyc 8 0.000 2 0.001










cuticle biosynthesis TAIR-GO 7 0.000 1 0.003










wax biosynthesis TAIR-GO 7 0.000 1 0.001










epicuticular wax biosynthesis AraCyc 7 0.000 1 0.000












































Pathways co-expressed in the Stress data set ( with more than 6 annotation points)
CYP86A8 (At2g45970)







max. difference between log2-ratios: 3.5











max. difference between log2-ratios excluding lowest and highest 5%: 1.6











Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to stress heatmap






fatty acid metabolism TAIR-GO 9 0.000 1 0.000
Fatty acid elongation and wax and cutin metabolism AcylLipid 9 0.000 1 0.000












































Pathways co-expressed in the Hormone etc. data set (with more than 10 annotation points)
CYP86A8 (At2g45970)







max. difference between log2-ratios: 2.3











max. difference between log2-ratios excluding lowest and highest 5%: 3.8











Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to hormones etc. heatmap






Miscellaneous acyl lipid metabolism AcylLipid 22 0.000 3 0.048





Intermediary Carbon Metabolism BioPath 20 0.000 2 0.001










Cell Wall Carbohydrate Metabolism BioPath 10 0.001 1 0.080










UDP-carbohydrate metabolism BioPath 10 0.000 1 0.000










acetyl-CoA biosynthesis TAIR-GO 10 0.000 1 0.000










citrate lyase complex TAIR-GO 10 0.000 1 0.000










sugar mediated signaling TAIR-GO 10 0.000 1 0.000










C-compound and carbohydrate regulation of C-compound and carbohydrate utilization FunCat 10 0.000 1 0.000










C-compound and carbohydrate utilization FunCat 10 0.000 1 0.000










glycolysis and gluconeogenesis FunCat 10 0.000 1 0.072










regulation of C-compound and carbohydrate utilization FunCat 10 0.000 1 0.000










tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) FunCat 10 0.000 1 0.056










Citrate cycle (TCA cycle) KEGG 10 0.000 1 0.003










fatty acid metabolism TAIR-GO 9 0.000 1 0.002










Fatty acid elongation and wax and cutin metabolism AcylLipid 9 0.005 1 0.144










Translation factors KEGG 8 0.000 2 0.001










cellulose biosynthesis AraCyc 6.5 0.000 2 0.001





























































Pathways co-expressed in the Mutant data set (with more than 10 annotation points)
CYP86A8 (At2g45970)







max. difference between log2-ratios: 4.0











max. difference between log2-ratios excluding lowest and highest 5%: 2.5











Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to mutants heatmap






fatty acid metabolism TAIR-GO 18 0.000 2 0.000



Fatty acid elongation and wax and cutin metabolism AcylLipid 18 0.000 2 0.000



















page created by Alexandre OLRY 04/26/06