Co-Expression Analysis of: CYPedia Home Institut de Biologie Moléculaire des Plantes (Home)






CYP86B1 (At1g23190) save all data as Tab Delimited Table












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Pathways co-expressed in the 3 data sets with co-expressed pathways (with more than 6 annotation points each)
Find below a list of pathways that are co-expressed with the bait. First a list of pathways is given that are co-expressed in all data sets. Lists for each individual dataset are shown underneath. Depending on the number of co-expressed pathways only the top scoring pathways are given; all data can be saved as text using the link above.









Pathway Source Sum of scores Sum of genes









Fatty acid elongation and wax and cutin metabolism AcylLipid 48 9










































To the right of each table a thumbnail of the actual co-expression heatmap is given. Klick on the link to see the heatmap containing all co-expressed genes.















































For more information on how these pathway maps were generated please read the methods page
































































Pathways co-expressed in the Organ and Tissue data set (with more than 6 annotation points)
CYP86B1 (At1g23190)









max. difference between log2-ratios: 7.6













max. difference between log2-ratios excluding lowest and highest 5%: 4.3













Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to organ heatmap








Fatty acid elongation and wax and cutin metabolism AcylLipid 24 0.000 4 0.007



monoterpenoid biosynthesis TAIR-GO 19 0.000 2 0.000


mono-/sesqui-/di-terpene biosynthesis LitPath 19 0.000 2 0.032


monoterpene biosynthesis LitPath 19 0.000 2 0.000


terpenoid metabolism LitPath 19 0.000 2 0.035


fatty acid metabolism TAIR-GO 18 0.000 2 0.000


Stilbene, coumarine and lignin biosynthesis KEGG 18 0.000 5 0.000


Cell Wall Carbohydrate Metabolism BioPath 16 0.002 4 0.066


isoprenoid biosynthesis FunCat 16 0.000 3 0.000


lipid, fatty acid and isoprenoid biosynthesis FunCat 16 0.000 3 0.000


jasmonic acid biosynthesis AraCyc 14 0.000 2 0.000


lipoxygenase pathway AraCyc 14 0.000 2 0.000


Biosynthesis of prenyl diphosphates BioPath 10 0.000 1 0.035


Isoprenoid Biosynthesis in the Cytosol and in Mitochondria BioPath 10 0.000 1 0.067


sucrose metabolism BioPath 10 0.000 1 0.007


cell death TAIR-GO 10 0.000 1 0.000












dolichol biosynthesis TAIR-GO 10 0.000 1 0.000












fatty acid alpha-oxidation TAIR-GO 10 0.000 1 0.000












response to hypoxia TAIR-GO 10 0.000 1 0.000












sucrose biosynthesis AraCyc 10 0.000 1 0.004












sucrose degradation III AraCyc 10 0.000 1 0.003












detoxification FunCat 10 0.000 1 0.000












detoxification involving cytochrome P450 FunCat 10 0.000 1 0.002












glycolysis and gluconeogenesis FunCat 10 0.002 1 0.158












Ascorbate and aldarate metabolism KEGG 10 0.000 1 0.009












Fluorene degradation KEGG 10 0.000 1 0.003












gamma-Hexachlorocyclohexane degradation KEGG 10 0.000 1 0.004












Starch and sucrose metabolism KEGG 10 0.000 1 0.071












fatty acid modulation LitPath 10 0.000 1 0.001












polyprenyl diphosphate biosynthesis LitPath 10 0.000 1 0.013












monoterpene biosynthesis AraCyc 9 0.000 1 0.000












plant monoterpene biosynthesis AraCyc 9 0.000 1 0.000












fatty acid elongation TAIR-GO 8 0.000 1 0.001












long-chain fatty acid metabolism TAIR-GO 8 0.000 1 0.004












very-long-chain fatty acid metabolism TAIR-GO 8 0.000 1 0.003












Methane metabolism KEGG 8 0.000 4 0.000












Phenylalanine metabolism KEGG 8 0.000 4 0.000












Prostaglandin and leukotriene metabolism KEGG 8 0.000 4 0.000


















































Pathways co-expressed in the Stress data set ( with more than 6 annotation points)
CYP86B1 (At1g23190)









max. difference between log2-ratios: 6.4













max. difference between log2-ratios excluding lowest and highest 5%: 1.7













Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to stress heatmap








Stilbene, coumarine and lignin biosynthesis KEGG 12 0.000 2 0.001
fatty acid metabolism TAIR-GO 10 0.000 1 0.000
detoxification FunCat 10 0.000 1 0.000
detoxification involving cytochrome P450 FunCat 10 0.000 1 0.000












Ascorbate and aldarate metabolism KEGG 10 0.000 1 0.001












Fluorene degradation KEGG 10 0.000 1 0.000












gamma-Hexachlorocyclohexane degradation KEGG 10 0.000 1 0.000












Fatty acid elongation and wax and cutin metabolism AcylLipid 10 0.000 1 0.013












fatty acid modulation LitPath 10 0.000 1 0.000


















































Pathways co-expressed in the Hormone etc. data set (with more than 6 annotation points)
CYP86B1 (At1g23190)









max. difference between log2-ratios: 5.4













max. difference between log2-ratios excluding lowest and highest 5%: 2.5













Pathway Source Scores of Genes p[Score] No. of Genes p[genes] Link to hormones etc. heatmap








Fatty acid elongation and wax and cutin metabolism AcylLipid 14 0.000 4 0.001






isoprenoid biosynthesis FunCat 8 0.000 2 0.000





lipid, fatty acid and isoprenoid biosynthesis FunCat 8 0.000 2 0.000





Leaf Glycerolipid Biosynthesis BioPath 7 0.000 1 0.038





Leaf Glycerolipid Biosynthesis in cytosol / ER BioPath 7 0.000 1 0.001





Synthesis of membrane lipids in endomembrane system AcylLipid 7 0.008 1 0.178





































































Pathways co-expressed in the Mutant data set (with more than 6 annotation points)
CYP86B1 (At1g23190)









max. difference between log2-ratios: 5.6













max. difference between log2-ratios excluding lowest and highest 5%: 3.2



















Link to mutants heatmap








There are no co-expressed pathways with more than 6 annotation points
























page created by Alexandre OLRY 04/26/06