| Co-Expression Analysis of: | CY86B2 (At5g08250) | Institut de Biologie Moléculaire des Plantes |
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| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organ and Tissue Data Set | view / save heatmap as: | OpenOffice table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(sample / average)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | suspension cell, aphidicolin, 0h ( 5) | suspension cell, aphidicolin, 2h (5) | suspension cell, aphidicolin, 4h (5) | suspension cell, aphidicolin, 6h (5) | suspension cell, aphidicolin, 8h (5) | suspension cell, aphidicolin, 10h (5) | suspension cell, aphidicolin, 12h (5) | suspension cell, aphidicolin, 14h (5) | suspension cell, aphidicolin, 16h (5) | suspension cell, aphidicolin, 19h (5) | suspension cell, sucrose, 0h (6) | suspension cell, sucrose, 2h (6) | suspension cell, sucrose, 4h (6) | suspension cell, sucrose, 6h (6) | suspension cell, sucrose, 8h (6) | suspension cell, sucrose, 10h (6) | suspension cell, sucrose, 12h (6) | suspension cell, 1d (19) | suspension cell, 1d (19) | suspension cell, 5d (19) | suspension cell, 7d (19) | suspension cell, senescing (20) | protoplast (62) | suspension cell, light (153) | suspension cell, dark (153) | callus, transdifferentiation A1 (78) | callus, transdifferentiation A2 (78) | callus, transdifferentiation A3 (78) | callus, transdifferentiation A4 (78) | callus, transdifferentiation A5 (78) | callus, transdifferentiation A6 (78) | seedling (59) | seedling (137) | seedling (138) | seedling (143) | seedling (144) | seedling, cont. light, 26h (149) | seedling, cont. light, 26h (149) | seedling, cont. light, 34h (149) | seedling, cont. light, 38h (149) | seedling, cont. light, 42h (149) | seedling, cont. light, 46h (149) | seedling, cont. light, 50h (149) | seedling, cont. light, 54h (149) | seedling, cont. light, 58h (149) | seedling, cont. light, 62h (149) | seedling, cont. light, 66h (149) | seedling, cont. light, 70h (149) | seedling, cont. light, 74h (149) | seedling, far red then white light (83) | seedling, dark then white light (83) | Cotyledon (87) | Hypocotyl (87) | Hypocotyl (139) | leaf, dedifferentiation A01 (50) | leaf, dedifferentiation A02 (50) | leaf, dedifferentiation A81 (50) | leaf, dedifferentiation A82 (50) | leaf, dedifferentiation A301 (50) | leaf, dedifferentiation A302 (50) | leaf, dedifferentiation A481 (50) | leaf, dedifferentiation A482 (50) | leaf, dedifferentiation B01 (50) | leaf, dedifferentiation B02 (50) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 2h (56) | leaf, whole rosette, 4h (56) | leaf, whole rosette, 8h (56) | leaf, whole rosette, 12h (56) | leaf, whole rosette, 13h (56) | leaf, whole rosette, 14h (56) | leaf, whole rosette, 16h (56) | leaf, whole rosette, 20h (56) | leaf, whole rosette, 24h (56) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 4h (56) | leaf, whole rosette, 8h (56) | leaf, whole rosette, 12h (56) | leaf, whole rosette, 16h (56) | leaf, whole rosette, 20h (56) | leaf, mature, high light (68) | leaf, mature, low light (68) | leaf stage 7, petiol (88) | leaf stage 7, proximal half (88) | leaf stage 7, distal half (88) | guard cell enriched (11) | senescing leaf, Col5 (60) | senescing leaf, Col0 (60) | senescing leaf (88) | cauline leaf (88) | roots (87) | whole roots, A. halleri (101) | whole roots, A. petrea (101) | roots (141) | mature roots (23) | lateral roots (24) | lateral roots (29) | roots, axillary buds, dormant (30) | roots, axillary buds, active (30) | Roots, N03 depleted, dex treated (64) | Roots, N03 depleted (64) | root elongation zone (79) | stem (80) | stem (88) | stem, base (66) | stem, tip (66) | stem, 1st node (88) | stem, base, injured with needle (8) | shoot apex (87) | shoot apex (87) | shoot apex (88) | apical region, vegetative, Col (94) | apical region, reproductive, 3d, Col (94) | apical region, reproductive, 5d, Col (94) | apical region, reproductive, 7d, Col (94) | apical region, vegetative, Ler (94) | apical region, reproductive, 3d, Ler (94) | apical region, reproductive, 5d, Ler (94) | apical region, reproductive, 7d, Ler (94) | flower, stage 9 (89) | flower, stage 10 (89) | flower, stage 12 (89) | flower, stage 15 (89) | flower-silique, stage I (84) | flower-silique, stage II (84) | flower-silique, stage III (84) | flower bud, young (9) | flower bud, old (9) | flower (80) | flower (92) | flower (100) | sepal, stage 12 (89) | sepal, stage 15 (89) | petal, stage 12 (89) | petal, stage 15 (89) | stamen, stage 12 (89) | stamen, stage 15 (89) | carpel, stage 12 (89) | carpel, stage 15 (89) | pedicel, stage 15 (89) | pollen, uninucleate microspores (22) | pollen, bicellular (22) | pollen, tricellular (22) | pollen, mature (22) | pollen (74) | silique, young (136) | silique, old (136) | silique, stage 3 (90) | silique, stage 4 (90) | silique, stage 5 (90) | seed, stage 6 (90) | seed, stage 7 (90) | seed, stage 8 (90) | seed, stage 9 (90) | seed, stage 10 (90) | seed, dry (116) | seed, dry (117) | seed, fresh (96) | seed, dormant (96) | seed, imbibed, 1h (117) | seed, imbibed, 3h (117) | seed, imbibed, 22°C (118) | seed, imbibed, far red, 22°C (132) | seed, imbibed, 4°C (118) | seed, imbibed, far red, 4°C (132) | seed, imbibed (116) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At5g08250 | 1.000 | CYP86B2 | cytochrome P450 family protein | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | 0.37 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | 0.92 | 2.14 | -0.16 | -0.16 | -0.16 | -0.16 | 1.5 | 0.8 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | 2.3 | -0.16 | -0.16 | -0.16 | 0.89 | -0.15 | -0.16 | 0.39 | 0.89 | -0.16 | 0.83 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | 2.8 | 2.54 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | 0.88 | 2.48 | 2.17 | 2.15 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | -0.16 | At5g08250 | 250576_at | CYP86B2 | cytochrome P450 family protein | 1 | cytochrome P450 family | 1.07 | 2.96 | |||||||
| At3g11430 | 0.655 | Encodes a protein with glycerol-3-phosphate acyltransferase activity. | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | 1.12 | -0.6 | -0.6 | 0.44 | -0.6 | -0.6 | -0.6 | -0.6 | 0.61 | 1.36 | 0.26 | 0.92 | -0.6 | 1.76 | 1.48 | 0.78 | -0.6 | -0.6 | -0.6 | 1.31 | -0.6 | -0.6 | 1.05 | -0.6 | -0.6 | -0.6 | -0.6 | 1.34 | -0.6 | 1.61 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | 1.32 | -0.6 | -0.6 | 2.67 | 2.52 | 1.99 | -0.6 | -0.6 | -0.6 | 2.66 | 2.74 | -0.25 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | 1.85 | 3.37 | 3.05 | 3.28 | 0.62 | 0.46 | 2.25 | 2.68 | -0.31 | 0.76 | -0.6 | -0.2 | 0.47 | 0.17 | 5.05 | 6.41 | -0.6 | 0.75 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | 1.37 | -0.6 | -0.5 | 2.66 | 3.88 | 3.2 | 3.24 | 2.76 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | -0.6 | At3g11430 | 259282_at | Encodes a protein with glycerol-3-phosphate acyltransferase activity. | 7 | 1-acylglycerol-3-phosphate O-acyltransferase activity | Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in cytosol / ER | Synthesis of membrane lipids in endomembrane system | 3.36 | 7.02 | |||||||
| At4g34510 | 0.639 | KCS2 | very-long-chain fatty acid elongase | 3.08 | -0.45 | -0.45 | -0.45 | -0.45 | 2.49 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | 1.01 | -0.45 | -0.45 | 0.43 | 1 | 0.46 | 0.61 | -0.45 | -0.45 | -0.45 | 4.71 | -0.45 | 5.05 | -0.45 | -0.45 | -0.45 | 4.19 | 3.41 | 1.75 | -0.45 | -0.45 | -0.45 | 1.08 | -0.45 | 7.63 | 3.96 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | 2.29 | 4.92 | 6.2 | 4.74 | 3.94 | 3.08 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | -0.45 | At4g34510 | 253240_at | KCS2 | very-long-chain fatty acid elongase | 6 | very-long-chain fatty acid metabolism | fatty acid elongation | fatty acid elongation -- saturated | fatty acid biosynthesis -- initial steps | fatty acid elongation -- unsaturated | Fatty acid elongation and wax and cutin metabolism | 4.23 | 8.08 | |||||
| page created by Alexandre OLRY | 04/21/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||