| Co-Expression Analysis of: | CYP88A4, KAO2 (At2g32440) | Institut de Biologie Moléculaire des Plantes |
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| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Hormones etc. Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(treatment/control)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | ethylene, 3h, petiole (13) | mock, 30min, seedling (110) | IAA, 30min, seedling (110) | IAA, 1h, seedling (110) | IAA, 3h, seedling (110) | zeatin, 30min, seedling (110) | zeatin, 1h, seedling (110) | zeatin, 3h, seedling (110) | GA3, 30min, seedling (110) | GA3, 1h, seedling (110) | GA3, 3h, seedling (110) | ABA, 30min, seedling (110) | ABA, 1h, seedling (110) | ABA, 3h, seedling (110) | MJ, 30min, seedling (110) | MJ, 1h, seedling (110) | MJ, 3h, seedling (110) | ACC, 30min, seedling (110) | ACC, 1h, seedling (110) | ACC, 3h, seedling (110) | BL, 30min, seedling (110) | BL, 1h, seedling (110) | BL, 3h, seedling (110) | ABA, 3 uM, imbided seed (116) | ABA, 30 uM, imbided seed (116) | GA, 3h, imbibed seed (119) | GA, 6h, imbibed seed (119) | GA, 9h, imbibed seed (119) | GA, 3h, imbibed seed (134) | GA, 6h, imbibed seed (134) | GA, 9h, imbibed seed (134) | GA, 30min, whole plant (99) | GA, 60min, whole plant (99) | GA, 3h, whole plant (99) | IAA, 0.1uM, 1h, seedling (144) | IAA, 0.1uM, 3h, seedling (144) | IAA, 1uM, 1h, seedling (144) | IAA, 1uM, 3h, seedling (144) | ppi, 3h, seedling (113) | ppi, 12h, seedling (113) | uni, 3h, seedling (113) | uni, 12h, seedling (113) | brz220, 3h, seedling (113) | brz220, 12h, seedling (113) | brz91, 3h, seedling (113) | brz91, 12h, seedling (113) | pac, 3h, seedling (113) | pac, 12h, seedling (113) | px, 3h, seedling (113) | px, 12h, seedling (113) | pno8, 3h, seedling (113) | pno8, 12h, seedling (113) | ibup, 3h, seedling (113) | B9, 3h, seedling (113) | AgNO3, 3h, seedling (113) | AVG, 3h, seedling (113) | Sal, 3h, seedling (113) | MG132, 3h, seedling (113) | 246T, 3h, seedling (113) | PCIB, 3h, seedling (113) | TIBA, 3h, seedling (113) | NPA, 3h, seedling (113) | CHX, 3h, seedling (113) | Colm, 3h, seedling (113) | ColPNO8, 3h, seedling (113) | ColBrz, 3h, seedling (113) | glucose, 8h, seedling (14) | sucrose, 8h, seedling (15) | deoxyglucose, 8h_seedling (14) | methylglucose, 8h, seedling (14) | K depleted, whole rosette (97) | K depleted, root (97) | Sulfate depleted, 2h, root (112) | Sulfate depleted, 4h, root (112) | Sulfate depleted, 8h, root (112) | Sulfate depleted, 12h, root (112) | Sulfate depleted, 24h, root (112) | mannitol, 8h, seedling (14) | CO2, 1000ppm, guard cell enriched (11) | CO2, 1000ppm, mature leaf (11) | CO2, high light, whole rosette (95) | CO2, medium light, whole rosette (95) | CO2, low light, whole rosette (95) | CO2, 2h, juvenile leaf (151) | CO2, 4h, juvenile leaf (151) | CO2, 6h, juvenile leaf (151) | CO2, 12h, juvenile leaf (151) | CO2, 24h, juvenile leaf (151) | CO2, 48h, juvenile leaf (151) | dark, 45min, seedling (109) | dark, 4h, seedling (109) | far red, 45min, seedling (109) | far red, 4h, seedling (109) | red pulse1, seedling (109) | red pulse2, seedling (109) | red, 45min, seedling (109) | red, 4h, seedling (109) | blue, 45min, seedling (109) | blue, 4h, seedling (109) | UV-A pulse1, seedling (109) | UV-A pulse2, seedling (109) | UV-AB pulse1, seedling (109) | UV-AB pulse2, seedling (109) | UV-A, 18h, mature leaf (72) | UV-B, 18h, mature leaf (72) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At2g32440 | 1.000 | KAO2, CYP88A4 | ent-kaurenoic acid hydroxylase / cytochrome P450 family protein | 0.16 | 0.08 | 0.08 | 0.09 | -0.42 | -0.2 | -0.02 | -0.35 | -0.02 | -0.17 | -0.24 | -0.11 | 0.2 | -0.54 | 0.05 | 0.22 | -0.05 | 0.1 | 0.04 | -0.17 | 0.25 | 0.05 | -0.42 | 0.16 | 0.16 | -0.36 | -0.3 | -0.28 | -0.36 | -0.3 | -0.28 | -0.02 | -0.07 | 0.42 | 0.16 | -0.19 | 0.23 | 0.23 | -0.1 | -0.22 | -0.3 | -0.02 | 0.05 | -0.04 | 0.05 | 0.1 | -0.12 | -0.04 | 0.2 | 0.26 | 0.09 | 0.05 | 0.02 | -0.13 | -0.15 | 0 | -0.06 | -0.08 | 0.08 | 0.15 | 0.06 | 0.03 | -0.39 | -0.11 | 0.1 | 0.15 | -0.4 | -0.13 | -0.1 | -0.12 | -0.53 | 0.28 | -0.06 | 0.15 | -0.33 | 0.05 | 0.11 | -0.21 | 0.28 | -0.14 | -0.11 | -0.02 | -0.1 | 0.21 | 0.05 | 0.02 | 0.13 | 0.14 | 0.09 | 0.4 | 0.64 | 0.28 | 0.2 | 0.03 | 0.51 | 0.16 | 0.19 | 0.1 | 0.19 | -0.04 | 0.66 | 0.18 | 0.49 | -0.14 | -0.61 | At2g32440 | 266335_at | KAO2, CYP88A4 | ent-kaurenoic acid hydroxylase / cytochrome P450 family protein | 10 | Diterpenoid biosynthesis | Gibberellin metabolism | giberelin biosynthesis | cytochrome P450 family, multifunctional ent-kaurenoic acid oxidase, gibberellin biosynthesis | 0.78 | 1.26 | |||||
| At5g54190 | 0.617 | PORA | protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophyllide oxidoreductase A (PORA) | -0.56 | -0.14 | 0.3 | -0.24 | -0.72 | 0.5 | 0.07 | -0.88 | 0.64 | -0.08 | -0.66 | 0.71 | 0.4 | -0.74 | 0.76 | 0.05 | -0.49 | 0.69 | 0.47 | -0.45 | 0.14 | 0.22 | 0.13 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.62 | 0.28 | -1.21 | -0.41 | -0.55 | 1.08 | 0.12 | -0.42 | -0.14 | -0.74 | -0.14 | -0.54 | 0.22 | -0.16 | 0.35 | -0.56 | -0.14 | 0.62 | 0.5 | 0.07 | 0.43 | -0.23 | -0.56 | -0.15 | -0.2 | -0.2 | -0.56 | -0.56 | -0.3 | -0.56 | -0.11 | -0.38 | 0.07 | -0.07 | 0.37 | -0.14 | -0.69 | -0.14 | -0.14 | -2.36 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.48 | 0.07 | -0.31 | 1.27 | 0.43 | -0.09 | -0.19 | -0.28 | -0.25 | -0.15 | -0.23 | 0.35 | 3.03 | 0.37 | 0.48 | 0.19 | 2.91 | -0.09 | 0.85 | -0.37 | 0.22 | -0.12 | 3.06 | 0.27 | 2.58 | -0.53 | -2.24 | At5g54190 | 248197_at | PORA | protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophyllide oxidoreductase A (PORA) | 10 | chloroplast | protochlorophyllide reductase activity | chlorophyll biosynthesis | chlorophyll biosynthesis | Porphyrin and chlorophyll metabolism | Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown | chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis | 1.77 | 5.43 | |||
| At4g25280 | 0.588 | adenylate kinase family protein | 0.14 | -0.02 | 0.06 | 0.13 | 0.27 | 0.08 | 0.25 | 0.02 | 0.07 | 0.26 | -0.17 | 0.07 | 0.35 | -0.63 | 0.38 | 0.53 | 0.1 | 0.2 | 0.47 | -0.16 | 0.56 | 0.52 | -0.28 | -0.1 | -0.13 | -0.37 | -0.22 | -0.75 | -0.37 | -0.22 | -0.75 | -0.23 | -0.04 | 0.28 | -0.05 | 0.37 | 0.23 | -0.15 | 0.22 | -0.57 | -0.21 | -0.21 | -0.11 | -0.08 | -0.33 | -0.18 | 0.16 | -0.15 | 0.05 | 0.18 | 0.11 | -0.25 | -0.14 | -0.1 | -0.32 | 0.1 | 0.12 | 0.11 | 0.13 | 0.13 | -0.11 | 0.07 | 0.09 | 0.43 | 0.41 | 0.19 | -0.24 | -0.07 | -0.36 | -0.75 | -0.63 | -0.27 | 0.12 | -0.14 | 0.17 | 0.1 | 0.04 | -0.62 | 0.16 | 0.27 | -0.31 | 0.16 | -0.06 | -0.18 | -0.04 | -0.21 | -0.04 | 0.08 | -0.15 | 0.47 | 0.74 | 0.23 | -0.11 | 0.14 | 0.85 | 0.15 | -0.06 | 0.09 | -0.19 | -0.33 | 0.6 | -0.03 | 0.66 | -0.16 | -0.52 | At4g25280 | 254052_at | adenylate kinase family protein | 2 | pyrimidine nucleotide metabolism | chorismate biosynthesis | de novo biosynthesis of purine nucleotides I | de novo biosynthesis of pyrimidine deoxyribonucleotides | 1.14 | 1.61 | ||||||||
| At5g51210 | 0.575 | glycine-rich protein / oleosin, | 0.22 | -0.02 | 0.05 | -0.09 | 0.31 | -0.49 | 0.71 | 0.08 | -0.22 | 0.55 | -0.03 | -0.03 | 0.64 | -0.41 | -0.07 | 0.66 | 0.1 | 0.44 | 0.92 | -0.13 | -0.48 | 0.75 | -0.36 | 0.42 | 0.94 | -0.25 | 0.2 | -0.5 | -0.25 | 0.2 | -0.5 | -0.28 | -0.28 | 0.38 | 0.32 | 0.15 | -0.12 | -0.25 | -0.62 | 0.02 | -0.89 | 0.03 | -0.44 | -0.31 | -0.27 | 0.14 | -0.84 | 0.28 | -0.18 | -0.3 | -0.24 | 0.02 | 0.13 | 0.07 | -0.43 | -0.93 | -0.52 | -1.02 | -0.14 | -0.2 | -0.41 | -0.5 | -0.45 | -0.07 | -0.15 | 0.28 | -0.56 | -0.54 | -0.62 | -0.62 | -0.46 | 0.06 | -0.07 | 0.39 | -0.1 | -0.09 | 0.18 | -0.66 | -0.03 | -0.71 | -0.68 | -0.02 | 0.65 | 0.43 | 0.39 | -0.28 | 0.16 | 0.25 | 0.08 | 0.19 | 2.65 | 0.12 | 0.23 | -0.16 | 1.48 | 0 | 0.21 | 0.09 | 0.27 | -0.01 | 1.7 | 0.14 | 1.27 | -0.28 | -0.34 | At5g51210 | 248435_at | glycine-rich protein / oleosin, | 4 | Synthesis and storage of oil | 1.56 | 3.67 | |||||||||
| At3g22960 | 0.515 | similar to pyruvate kinase isozyme A, chloroplast precursor (Ricinus communis) | 0.02 | 0.09 | 0.11 | 0.01 | 0.08 | 0.15 | -0.03 | 0.04 | 0.1 | 0.02 | 0.18 | 0.11 | -0.02 | -0.25 | 0.18 | -0.02 | 0.06 | 0.12 | 0.11 | 0.15 | 0.2 | -0.08 | 0.17 | 0.23 | -0.02 | -0.03 | -0.17 | -0.35 | -0.03 | -0.17 | -0.35 | -0.07 | -0.28 | -0.31 | -0.01 | 0.02 | 0.18 | -0.37 | -0.01 | 0.06 | 0.1 | 0.06 | 0.04 | 0.18 | -0.05 | 0.24 | -0.02 | 0.07 | -0.2 | 0.14 | -0.08 | 0.15 | 0 | 0.05 | -0.11 | 0.1 | -0.23 | 0.01 | 0.04 | -0.15 | -0.06 | 0.06 | -0.67 | -0.04 | -0.23 | -0.04 | -0.1 | -0.57 | 0.06 | 0.15 | -1.22 | 0.32 | 0.06 | 0.17 | 0.05 | 0.07 | -0.16 | -0.07 | 0.37 | 0.04 | 0.27 | 0.12 | -0.01 | 0.12 | 0.02 | 0.09 | 0 | 0.06 | -0.08 | 0.09 | 0.82 | -0.01 | 0.09 | 0.08 | 0.45 | 0.05 | 0.19 | -0.03 | -0.17 | 0.05 | 0.43 | 0.12 | 0.22 | -0.43 | -0.86 | At3g22960 | 256836_at | similar to pyruvate kinase isozyme A, chloroplast precursor (Ricinus communis) | 4 | C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | glycerol degradation II | sorbitol fermentation | fructose degradation (anaerobic) | non-phosphorylated glucose degradation | mixed acid fermentation | acetate fermentation | glycolysis I | glycolysis IV | Intermediary Carbon Metabolism | 0.62 | 2.05 | |||||||
| At5g49690 | 0.507 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.14 | 0.49 | 0.42 | -1.03 | -0.63 | 0.42 | -1.03 | -0.63 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.51 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | -0.09 | 0.71 | 2.59 | 0.81 | -0.09 | 0.01 | 1.19 | 0.56 | 0.81 | -0.24 | -0.09 | 0.78 | 1.58 | 0.5 | 0.94 | -0.09 | -0.09 | At5g49690 | 248563_at | UDP-glucoronosyl/UDP-glucosyl transferase family protein | 1 | Glycosyl transferase, Family 1 | 1.02 | 3.62 | |||||||||
| page created by Juergen Ehlting | 05/22/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||