Co-Expression Analysis of: CYP88A4, KAO2 (At2g32440) Institut de Biologie Moléculaire des Plantes











































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At2g32440 1.000 KAO2, CYP88A4 ent-kaurenoic acid hydroxylase / cytochrome P450 family protein -0.31 -0.02 -0.2 -0.95 -0.01 0.06 -0.2 0.04 0.03 0.16 -0.15 0.08 -0.09 -0.2 0.13 -0.13 -0.09 -0.14 -0.07 -0.07 -0.43 -0.05 -0.12 -0.37 0.02 0.2 -0.03 -0.14 -0.17 -0.25 0.34 0.33 0.24 0.28 0.3 0 -0.18 -0.07 0.56 0.04 0.04 0.04 0.04 -0.42 0.55 0.11 0.09 -0.04 -0.01 -0.32 -0.1 -0.04 0.34 -0.36 0.24 0.09 -0.02 0.01 1.12 -0.51 -0.44 -0.38 -0.28 -0.63 0.11 0.11 0.41 0.31 0.24 -0.09 0.49 -0.33 0.27 -0.02 0.28 0.37 0.43 0.91 -0.08 0.52 -0.03 0.12 -0.3 -0.01 0.04 -0.55 0.15 -0.04 -0.97 -0.97 -0.08 -0.03 0 0.1 -0.07 -0.07 -0.23 -0.47 0.46 -0.16 0.15 0.12 -0.15 -0.06 -0.31 0.15 -0.81 -0.23 -0.01 -0.06 -0.21 0.16 0.37 0.11 0.04 0.14 0.04 0.19 0.28 -0.1 -0.26 -0.13 0.22 0.05 0.24 1.55 -0.11 -0.25 0.04 0.16 -0.2 0.18 0.56 0.36 -0.54 -0.56 -0.02 0.02 0.73 0.56 0.17 -0.35 -0.28 -0.26 At2g32440 266335_at KAO2, CYP88A4 ent-kaurenoic acid hydroxylase / cytochrome P450 family protein 10


Diterpenoid biosynthesis

Gibberellin metabolism | giberelin biosynthesis cytochrome P450 family, multifunctional ent-kaurenoic acid oxidase, gibberellin biosynthesis 1.08 2.52
At4g33670 0.615
L-galactose dehydrogenase (L-GalDH) 0.17 -0.75 -0.18 -1.09 -0.05 0.01 -0.07 0.11 -0.22 -0.12 -0.18 -0.04 0.02 -0.1 -0.37 -0.02 -0.13 -0.09 -0.35 0.14 0.1 -0.13 -0.15 0.11 0.23 0.38 0.43 0.18 -0.1 -0.14 0.04 0.02 -0.04 0.18 0.53 -0.01 -0.34 0.07 0.28 0 0 0 0 -0.54 -0.48 -0.04 0.27 0.15 0.25 0.38 0.07 0.05 0.4 -0.36 0.27 0.03 0.05 0.04 0.31 -0.18 -0.04 0.12 0.12 -0.56 -0.06 -0.02 -0.03 0.03 -0.02 0.06 -0.01 0.03 0.02 0.25 0.28 0.13 -0.11 0.49 -0.14 -0.37 0.05 0.11 -0.07 -0.15 -0.02 0.17 -0.28 0.2 -1.38 -1.39 0.04 -0.24 -0.25 0.07 0.08 0.03 -0.13 -0.31 0.31 0.01 0.39 -0.17 0.14 -0.14 0.71 0.04 -0.75 -0.4 -0.1 -0.11 0.13 -0.1 -0.04 0.02 0.04 -0.41 0.16 0.28 0.91 0.02 0.03 0.26 -0.04 0.17 -0.21 3.67 -0.18 0.05 0 -0.04 -0.04 -0.25 0.33 0.41 -0.17 -0.24 0.02 -0.1 0.41 0.52 -0.24 -0.44 -0.39 -0.24 At4g33670 253307_at
L-galactose dehydrogenase (L-GalDH) 8



Cell Wall Carbohydrate Metabolism | ascorbic acid biosynthesis


0.88 5.06
At2g32090 0.579
lactoylglutathione lyase family protein / glyoxalase I family protein 0 -0.32 -0.3 -1.55 0.03 0.09 -0.35 0.2 -0.38 0.33 -0.61 0.22 -0.01 -0.28 -0.44 -0.03 -0.42 0.08 -0.4 0.41 0.2 0 0.13 -0.38 -0.3 0.28 0.47 0.04 0.32 0.05 0.54 0.48 0.28 -0.3 0.06 0.28 -0.15 0.09 0.57 0.09 0.09 0.09 0.09 -0.12 -0.13 -0.1 -0.33 -0.11 -0.59 -0.56 -0.2 -0.27 0.17 0.09 -0.09 0.1 0.35 0.49 1.11 -0.14 0.05 0.19 0.16 -1.21 -0.09 -0.28 -0.4 -0.34 -0.18 -0.31 0.19 0.31 -0.02 0.57 0.64 -0.57 -1.03 -0.06 0.06 0.44 0.05 0.11 0.51 0.03 0.13 -0.51 -0.56 0.43 -0.75 -1.7 0.12 -0.09 -0.12 0.25 0.06 -0.16 -0.13 -0.22 0.79 0.83 0.26 0.54 0.28 -0.11 -0.08 0.06 -0.92 -0.22 0.36 -0.2 -0.19 0.03 0.09 0.12 0.03 -0.42 0.18 0.21 0.96 0.09 0.6 0.08 0.01 0.19 -0.17 2.77 -0.13 -0.14 0.09 -0.04 0.28 -0.28 0.54 0.56 -0.82 -1 0.06 -0.39 0.31 0.51 -0.45 0 0.51 -0.28 At2g32090 265673_at
lactoylglutathione lyase family protein / glyoxalase I family protein 2

threonine degradation | methylglyoxal degradation




1.31 4.46
At1g62960 0.573 ACS10 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. Similar to 1-aminocyclopropane-1-carboxylate synthase -0.05 -0.03 -0.03 -0.32 0.18 0.05 0.02 0.04 0.1 0.09 -0.01 -0.17 -0.28 -0.16 0.07 -0.05 -0.14 0.08 -0.06 0 0.11 0.87 0.22 -0.04 -0.07 -0.01 -0.25 0.1 0.27 -0.07 -0.08 0.07 -0.54 -0.16 0.12 -0.08 -0.26 -0.1 -0.01 0.02 0.02 0.02 0.02 0.1 -0.33 -0.1 -0.06 -0.31 -0.32 -0.82 -0.19 0.04 0.16 -0.22 -0.57 0.03 -0.06 0.2 0.46 -0.07 0.17 -0.26 0.17 -0.03 -0.16 0.03 0.5 0.25 0.11 -0.2 -0.12 -0.48 0.47 0.19 -0.09 0.55 0.19 0.54 0.3 -0.17 0 0.03 0.47 0.19 0.27 -0.17 0.56 -0.05 -1.56 -1.47 0.03 0.02 0.23 -0.14 -0.28 -0.14 -0.03 0.07 0.37 0.09 0.44 0.41 -0.07 -0.2 0.17 -0.16 -0.23 -0.23 -0.18 0.28 -0.15 -0.17 0.22 -0.03 0.22 -0.46 0.33 0.18 0.3 -0.12 0.14 -0.01 -0.09 -0.07 -0.08 2.24 -0.13 0.06 0.02 -0.38 0 -0.04 0.2 -0.07 -0.46 -0.05 0.06 -0.12 0.76 0.36 0 -0.18 -0.38 -0.23 At1g62960 261108_at ACS10 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. Similar to 1-aminocyclopropane-1-carboxylate synthase 6 1-aminocyclopropane-1-carboxylate synthase activity | aromatic-amino-acid transaminase activity | aspartate transaminase activity | amino acid and derivative metabolism


Biosynthesis of Amino Acids and Derivatives | Methionin/SAM/ethylene metabolism from cysteine and aspartate


0.92 3.80
At1g44446 0.566 CH1 Encodes chlorophyll a oxidase which converts chlorophyllide A to chlorophyllide B by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide A . Mutants are deficient in pigments that associate with thylakoid membrane proteins 0 -0.82 -0.04 0.39 0.34 0.18 0.23 0.59 -0.53 0.06 -0.1 -0.06 0.06 -0.14 -1.07 0.28 -0.83 -0.13 -0.92 0.42 0.05 0.14 -0.35 0.17 -0.02 0.26 0.25 0.13 0.53 0.09 0.33 0.34 0.85 -0.06 0.01 -0.02 -0.94 0.06 0.06 0.06 0.06 0.06 0.06 -1.37 0.59 0.39 -0.24 -0.61 -0.85 -0.35 0.28 0.13 0.52 -1.39 0.51 -0.09 -0.1 0.06 0.56 0.32 0.08 -0.27 0.04 -0.23 -0.65 -1.09 -0.78 -0.18 -0.22 -0.51 0.35 -0.31 1.04 0.46 0.13 1.1 0.56 0.52 -0.15 -0.06 0.26 0.27 0.45 0.72 0.3 0.13 0.32 0.14 -1.9 -1.86 0.8 -0.12 0.06 0.03 -0.13 0.06 -0.05 -0.23 0.78 -0.08 0.4 -0.21 -1.55 -0.11 0.59 -0.03 -0.67 -0.43 -0.17 -0.14 -0.32 0.09 -0.05 0.28 0.06 -0.28 0.06 0.2 1.14 -0.57 0.04 0.08 -0.14 -0.03 0.22 4.94 -0.08 -0.24 0.06 -0.09 -0.28 -0.04 0.34 0.51 -0.64 -0.5 0.47 -0.47 0.73 -0.05 0.04 -0.88 -0.12 -0.34 At1g44446 245242_at CH1 Encodes chlorophyll a oxidase which converts chlorophyllide A to chlorophyllide B by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide A . Mutants are deficient in pigments that associate with thylakoid membrane proteins 10 protochlorophyllide reductase activity | chlorophyll biosynthesis | chlorophyll a oxygenase activity
chlorophyll biosynthesis
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.67 6.84
At5g67030 0.559 ABA1 Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid 0 -0.27 0.36 -0.81 0.22 -0.05 0.33 0.61 0.05 0.1 0.32 0.39 -0.22 0.07 -0.24 0.2 -0.49 0.19 0.11 0.09 -0.03 0.01 0 -0.01 -0.42 -0.02 -0.17 0.21 -0.3 0.31 0.16 0.43 -0.12 0.04 0.27 0.38 0.01 0.27 0.11 0.03 0.03 0.03 0.03 -0.22 0.27 0.22 -0.56 -0.34 -0.47 -0.43 -0.17 -0.1 0.14 -0.44 0.49 -0.04 0 0.14 0.23 0.48 0.15 0.04 0.15 -0.42 -0.18 0.14 -0.27 -0.23 -0.06 0.05 -0.33 -0.33 0.95 0.04 0.01 1.18 0.32 -0.34 0.46 0.47 0.09 0.25 0.63 0.32 0.38 -0.91 -0.08 -0.35 -1.6 -1.74 0.88 0.17 0.22 0.32 0.22 0.21 -0.09 -0.38 0.82 -0.23 0.23 -0.12 -0.22 0.04 0.19 -0.12 -1.08 -0.39 0 -0.06 -0.45 0.07 0.04 -0.11 -0.07 0.04 0.19 -0.14 -0.35 -0.13 -0.09 -0.04 0.12 -0.04 -0.02 2.49 -0.2 -0.12 0.03 -0.3 -0.3 -0.72 0.01 0.09 -0.1 -0.05 0.4 0.3 0.7 0.36 -0.42 -0.87 -0.36 -0.73 At5g67030 247025_at ABA1 Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid 8 xanthophyll biosynthesis | response to water deprivation | response to osmotic stress | zeaxanthin epoxidase activity | abscisic acid biosynthesis | sugar mediated signaling
carotenoid biosynthesis | xanthophyll cycle
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.29 4.23
At3g16850 0.544
glycoside hydrolase family 28 protein, weak similarity to Polygalacturonase 2A precursor (Pectinase) (Lycopersicon esculentum) 0.2 -0.28 0.13 0.01 0.38 0.15 -0.08 -0.01 0.53 -0.05 0.33 -0.06 0.23 -0.1 0.17 -0.04 -0.12 0.06 0.32 -0.13 0.05 -0.93 -0.34 0.2 0.64 0.41 0.63 0.08 0.57 -0.14 0.34 -0.07 0.04 0.23 0.35 0.02 0.54 -0.01 0.25 0.13 0.13 0.13 0.13 -0.56 0.2 0.27 -0.48 -0.36 -0.53 -0.31 -0.57 0.03 0.39 -0.88 0.08 0.2 0.28 0.16 0.46 -0.07 -0.42 -0.39 -0.38 0.49 -0.73 -0.53 -0.89 -0.46 -0.59 -0.52 0.09 0.2 0.33 0.67 0.43 -0.16 0.49 0.39 0.26 -0.05 0.14 0.1 0.55 0.18 0.14 0.14 -0.04 -0.21 -2.21 -2.59 0.01 -0.17 0.07 0.09 -0.01 0.05 -0.03 -0.2 -0.19 0.03 -0.31 -0.05 -0.42 -0.03 0.13 -0.28 -0.8 -0.49 0.09 -0.35 0.03 0.27 -0.01 0.38 0 -0.22 -0.19 -0.11 1.19 -0.53 -0.19 -0.04 -0.05 0.18 0.05 4.51 0.27 0.1 0.13 -0.11 -0.19 -0.45 0.43 0.68 -0.08 -0.08 0.28 0.4 0.87 0.04 -0.43 -0.77 -0.56 -0.66 At3g16850 257651_at
glycoside hydrolase family 28 protein, weak similarity to Polygalacturonase 2A precursor (Pectinase) (Lycopersicon esculentum) 2



Cell Wall Carbohydrate Metabolism | pectin metabolism


1.30 7.10
At3g06510 0.536 SFR2 glycosyl hydrolase family 1 protein; almost identical to beta-glucosidase (Arabidopsis thaliana) -0.03 -0.22 -0.27 0.38 -0.24 -0.09 0.25 0.05 0.24 -0.23 0.27 -0.49 -0.04 -0.09 0.06 0.1 0.31 0.02 0.32 0 -0.21 0.91 -0.08 0.15 -0.63 0 -0.39 0.07 -1.06 -0.46 -0.02 0.13 -0.37 0.13 0.01 0 -0.11 -0.02 0.09 -0.08 -0.08 -0.08 -0.08 0.61 -0.13 0.06 -0.05 0.22 0.21 0.34 0.17 0 -0.07 -0.16 0.03 -0.1 -0.27 -0.1 0.34 0.16 0.01 0.4 0.08 0.1 0.04 -0.05 -0.08 -0.03 0.1 0.15 0.1 0.06 0.13 -0.04 0.01 1.41 0.61 0.61 0.15 0.18 -0.05 0.3 0 0.52 0.04 -0.27 -0.08 -0.4 -2.21 -2 0.17 0.22 -0.12 -0.09 -0.03 -0.1 -0.18 -0.4 -0.14 -0.36 0.17 -0.3 0.24 -0.15 0.03 0.13 -0.84 -0.31 -0.16 -0.08 -0.33 -0.13 -0.36 0.03 -0.11 -0.03 -0.03 -0.03 -0.11 -0.22 -0.23 0 0.32 -0.15 0.01 6.21 -0.28 -0.23 -0.08 -0.2 -0.38 -0.26 0.22 0.23 -0.53 -0.31 0.01 0.26 0.44 0.13 -0.03 -0.5 -0.05 -0.19 At3g06510 258512_at SFR2 glycosyl hydrolase family 1 protein; almost identical to beta-glucosidase (Arabidopsis thaliana) 6






Glycoside Hydrolase, Family 1 0.92 8.42
At3g15850 0.530 FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 0.07 -0.1 -0.22 0.03 -0.06 0.24 -0.11 0.05 -0.65 0.03 0.07 -0.08 -0.24 -0.24 0.45 -0.06 -0.15 -0.04 -0.8 0.03 -0.14 -0.19 -0.77 0.03 0.82 -0.07 -0.41 0.32 0.2 0.11 0.03 -0.17 -0.65 -0.15 0.37 -0.1 0.32 0.2 0.28 0.04 0.04 0.04 0.04 -1.18 0.24 0.06 0.15 0.6 0.35 0.85 0.31 0.44 0.1 -1.75 -0.14 -0.02 0.1 0.17 0.34 0.44 -0.09 0.24 0.31 -0.14 -0.12 -0.04 -0.19 -0.16 -0.01 0.27 -0.14 -0.12 0.15 0.28 0.16 0.49 0.46 0.91 -0.21 -0.13 0.42 -0.09 0.41 0.19 0.09 -0.33 0.08 -0.1 -1.91 -1.51 0.23 -0.63 -0.09 -0.23 0.12 0.06 -0.18 -0.43 -0.07 -0.07 0.48 -0.35 -1.7 0.18 0.4 -0.22 -0.61 -0.61 -0.27 -0.31 -0.28 0.14 0.31 -0.07 0.19 0.09 0.23 0.16 0.98 -0.51 0.18 0.05 0.06 0.24 -0.04 2.7 0.13 0.45 0.04 -0.17 -0.26 0.46 0.14 0.05 -0.39 -0.38 0.05 -0.05 0.69 0.81 0.13 -0.42 -0.02 -0.08 At3g15850 258250_at FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 7 fatty acid desaturation | 16:0 monogalactosyldiacylglycerol desaturase activity | photoinhibition
glycosylglyceride desaturation pathway
Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.23 4.61
At3g10230 0.529 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -0.03 0.14 0.26 0.35 0.12 0 0.35 -0.17 -0.08 0.08 0.09 -0.09 -0.06 -0.16 -0.31 -0.16 -0.27 -0.01 0.06 -0.07 0.02 0.04 -0.22 0.14 -0.52 0.03 -0.21 0.25 -0.31 -0.07 0.03 -0.35 -0.52 0.12 0.1 -0.18 -0.13 0.18 0.28 0.03 0.03 0.03 0.03 -0.13 -0.18 0.03 0.27 0.26 0.17 0.35 0.31 0.14 0.23 -0.52 -0.1 -0.03 -0.08 0.26 0.28 0.1 -0.11 -0.11 0.02 0.24 -0.1 -0.05 -0.18 0.23 0.01 0.11 0.17 -0.03 0.35 0.3 0.05 0.44 0.37 0 0.2 0.27 0.1 0.1 0.22 0.08 0.41 -0.32 -0.07 -0.01 -1.49 -1.57 0.02 0.05 0.22 -0.13 0.16 0.17 -0.12 0.08 0.09 -0.26 0.05 -0.07 -0.61 0.04 0.21 -0.24 -0.86 -0.67 -0.17 -0.19 -0.44 0.01 -0.01 -0.03 0.18 0.11 0.55 0.13 0.31 -0.25 0.14 0.15 0.12 0.01 0.1 2.25 0 0.1 0.03 -0.33 -0.35 -0.19 0.06 0.23 -0.12 -0.03 -0.08 -0.13 0.65 0.35 -0.28 -0.26 -0.32 -0.27 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
0.86 3.83
At5g51970 0.529
similar to NAD-dependent sorbitol dehydrogenase from Malus x domestica -0.02 -0.46 0.02 -1.17 -0.34 -0.14 -0.45 0.32 0.28 0.03 0.41 -0.12 0.04 -0.55 -0.21 -0.05 -0.31 0.14 0.14 0.37 0.47 0.2 0.5 -0.42 -0.57 0.38 0.15 0.16 0.23 -0.35 0.13 -0.08 -0.15 0.51 0.81 0.01 0.09 0.33 0.46 -0.07 -0.07 -0.07 -0.07 0.16 -0.62 0.02 0.63 0.84 0.67 0.93 0.56 0.48 0.36 -0.13 0.15 0.11 0.1 -0.11 0.21 -0.1 0.02 0.22 -0.04 -1.13 -0.44 -0.48 -0.83 -0.69 -0.38 -0.36 0.12 0.57 -0.3 -0.11 0.16 0.16 -0.39 -0.08 0 -0.28 0.15 -0.35 0.77 0.44 0.24 0.15 -0.56 -0.14 -3.49 -3.46 0.07 -0.21 -0.06 0.22 0.25 0.01 -0.28 -0.56 0.1 -0.02 0.08 -0.42 -0.15 0.1 0.28 -0.13 -1.22 -0.46 0.16 -0.09 -0.12 -0.25 0.11 0.05 0.26 -0.4 0.75 0.05 1.96 -0.12 0.04 -0.34 -0.04 -0.06 -0.1 7.66 0.12 0.03 -0.07 -0.48 -0.11 -0.44 0.42 0.17 -0.67 -0.41 0.16 0.45 0.57 0.39 -0.31 -0.6 -0.19 -0.36 At5g51970 248398_at
similar to NAD-dependent sorbitol dehydrogenase from Malus x domestica 4
C-compound and carbohydrate metabolism
Fructose and mannose metabolism



1.33 11.15
At3g57050 0.528 CBL cystathionine beta-lyase, chloroplast / beta-cystathionase / cysteine lyase. Encodes second enzyme in the methionine biosynthetic pathway -0.31 0.04 -0.19 -0.16 -0.05 -0.08 0.05 -0.1 0.07 -0.01 0 -0.07 0.11 0.01 0.03 0.16 -0.05 -0.01 0 -0.12 -0.11 -0.06 -0.28 0.17 -0.77 -0.09 -0.1 -0.06 0.07 0.06 -0.11 -0.19 -0.1 -0.1 -0.32 0.11 0 -0.12 -0.03 -0.07 -0.07 -0.07 -0.07 -0.07 0.48 0.37 0.21 0.08 0.05 0.02 0.16 0.28 0.12 -0.28 0.22 0.16 0.01 0.1 0.2 0.33 0.28 0.2 0.24 0.24 0.02 0.01 -0.01 -0.04 0.1 -0.07 -0.41 -0.22 -0.03 -0.09 -0.28 0.39 0.04 0.27 0.02 0.07 0.05 0.03 -0.24 -0.18 -0.08 0.05 0.03 0.15 -1.73 -1.58 -0.01 0.05 -0.19 -0.08 -0.03 -0.01 -0.18 -0.19 0.06 -0.37 0.1 -0.09 -0.23 0.22 0.04 0.17 -0.62 -0.3 -0.12 0.04 -0.05 -0.24 0.07 -0.11 0.27 -0.32 0.77 -0.03 0.71 -0.34 -0.31 -0.18 -0.18 -0.14 0.01 5.24 0.27 0.04 -0.07 0.28 -0.24 -0.2 0.18 0.16 -0.33 -0.25 0.17 0.24 0.37 0.21 -0.35 -0.26 0.1 -0.4 At3g57050 251666_at CBL cystathionine beta-lyase, chloroplast / beta-cystathionase / cysteine lyase. Encodes second enzyme in the methionine biosynthetic pathway 10 cystathionine beta-lyase activity | methionine biosynthesis from L-homoserine via cystathione amino acid metabolism homocysteine and cysteine interconversion | methionine biosynthesis II | sulfate assimilation III Nitrogen metabolism | Sulfur metabolism | Methionine metabolism | Cysteine metabolism | Selenoamino acid metabolism Biosynthesis of Amino Acids and Derivatives | Methionin/SAM/ethylene metabolism from cysteine and aspartate


0.67 6.98
At1g03600 0.526
photosystem II family protein 0.14 -0.17 -0.22 0.2 0.11 0.01 0.41 0.49 0.38 -0.26 -0.17 -0.28 -0.45 0.07 -0.02 0.18 0.18 0.04 0.16 -0.02 -0.12 -0.22 -0.65 -0.11 0.33 0.1 0.14 0.17 -0.07 -0.21 0.28 -0.45 -0.63 -0.32 0.25 0.2 0.31 0.13 0.93 0.06 0.06 0.06 0.06 -1.02 0.2 -0.17 -0.38 -0.21 0.34 0.06 -0.03 0.04 0.35 -1.86 -0.33 0.01 0.16 0.33 0.41 0.19 0.07 0.21 -0.06 -0.04 -0.61 -0.49 -0.33 -0.3 -0.52 -0.07 0.49 0.13 0.24 0.47 0.33 0.81 -0.31 0.5 0.33 0.14 0.21 0.18 0.35 0.28 -0.25 0.07 -0.72 -0.12 -2.06 -2.35 0.61 0.43 -0.02 0 0.11 -0.13 0 -0.01 -0.12 -0.25 0.13 -0.51 -1.31 0.23 0.25 -0.19 -0.98 -0.23 -0.2 -0.1 -0.18 0.13 0.23 0.3 -0.1 -0.41 -0.05 0.2 1.22 0.31 0.26 -0.1 -0.18 0.2 -0.18 5.21 -0.01 0.13 0.06 0 -0.25 -0.35 0.16 0.39 -0.36 -0.02 0.45 0.35 0.22 0.38 -0.24 -0.75 -0.22 -0.24 At1g03600 264837_at
photosystem II family protein 2


Photosynthesis



1.19 7.56
At1g79750 0.519
similar to malate oxidoreductase (NADP-dependent malic enzyme) from Populus balsamifera subsp. trichocarpa -0.19 -0.16 -0.14 0.43 0.12 -0.1 -0.17 0.15 0.23 0.01 0.28 -0.26 -0.03 -0.02 0.11 0.09 0.06 0.18 0.08 -0.08 -0.1 -0.69 -0.38 0.21 -0.07 -0.06 -0.19 -0.16 0.09 -0.13 0.07 0.55 0.42 0.01 0.08 0.15 0 -0.14 0.28 -0.02 -0.02 -0.02 -0.02 0.18 -0.3 -0.35 0.37 0.49 0.32 0.59 0.51 0.39 0.06 -0.54 0.27 -0.05 -0.16 0.03 0.37 -0.26 -0.33 -0.07 -0.14 0.31 0.23 0.18 0.04 0.18 0.25 0.26 0.05 -0.32 0.16 -0.05 0.04 -0.42 0.2 0.36 -0.11 -0.12 -0.05 0.14 0.34 0.25 -0.04 -0.21 0.39 -0.49 -1.28 -1.13 0.1 -0.01 0.04 -0.16 -0.16 -0.09 -0.2 -0.22 -0.15 -0.7 -0.02 -0.17 0.03 0.31 -0.52 0.13 -0.15 -0.1 -0.06 -0.01 0.11 -0.2 0.08 0.14 -0.1 -0.16 -0.28 0.03 0.45 -0.35 -0.11 0.1 0.05 0.08 0.04 2.97 0.07 -0.11 -0.02 0.11 -0.57 -0.25 0.05 -0.23 -0.2 -0.11 0.05 0.02 0.5 0.25 -0.32 -0.4 -0.38 -0.18 At1g79750 261355_at
similar to malate oxidoreductase (NADP-dependent malic enzyme) from Populus balsamifera subsp. trichocarpa 4
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) gluconeogenesis | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV Pyruvate metabolism | Carbon fixation Intermediary Carbon Metabolism


0.91 4.25
At2g35780 0.515

0.43 0.1 0.38 0.56 -0.06 -0.06 0.1 0.16 0.02 -0.32 0.35 -0.07 -0.23 -0.37 -0.17 -0.15 -0.16 -0.02 -0.2 0.24 0.1 0.12 -0.48 -0.26 0.57 0.07 0 -0.07 0.03 -0.21 0.28 -0.02 -0.49 -0.05 0.06 -0.15 -0.4 -0.17 -0.1 -0.01 -0.01 -0.01 -0.01 -0.49 0.42 -0.04 -0.04 0.36 0.17 0.56 -0.02 0.11 0.1 -1 -0.16 0.12 -0.02 -0.12 0.28 0.31 -0.07 0.46 -0.18 0.43 -0.08 -0.1 -0.3 -0.14 0.02 0.2 0.33 -0.01 0 0.33 0.19 -0.28 0.64 0.82 0.28 -0.14 0.01 0.07 -0.08 -0.05 -0.06 0.02 -0.4 0.02 -2.44 -2.42 0.13 -0.28 0.04 -0.15 0.21 -0.13 -0.04 0.24 -0.46 -0.09 -0.22 -0.13 -0.51 -0.03 -0.08 -0.03 -0.84 -0.18 -0.17 -0.19 0.1 -0.02 -0.03 0.35 -0.06 -0.64 0.1 0.25 1.48 -0.08 0.08 0.12 -0.09 0.19 0 4.76 0.32 0.11 -0.01 0.41 -0.18 -0.12 0.37 0.25 -0.46 -0.13 0.19 -0.04 0.09 0.27 -0.16 -0.67 -0.62 -0.21 At2g35780 265795_at
serine carboxypeptidase S10 family protein 2






serine carboxy peptidase like, clade II 0.97 7.20
At1g09510 0.514
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function, NOT a cinnamyl-alcohol dehydrogenase 0.07 -0.3 -0.25 -1.17 0.02 -0.02 -0.34 -0.08 -0.04 0.02 0.02 0.02 0.28 0.04 -0.13 -0.11 -0.08 -0.38 -0.22 0.02 -0.01 -0.43 -0.32 0.14 0.02 0.03 0.24 0.11 0.39 -0.02 0.11 0.02 0.02 0.02 0.02 -0.04 -0.44 0.02 0.67 0.02 0.02 0.02 0.02 0.02 0.02 0.03 0.18 0.1 0.28 0.11 0.27 -0.05 0.16 0.02 0.02 0.02 0.02 -0.08 0.03 -0.62 -0.32 -0.55 -0.13 -0.9 0.16 0.08 0 0.39 0.1 -0.09 0.19 -0.03 0.34 -0.19 -0.25 0.14 -0.27 -0.24 0.02 0.02 -0.02 0.1 0.02 0.02 0.18 -0.02 0.04 -0.01 -0.01 -0.01 -0.08 0.25 0.02 0.07 -0.13 -0.15 -0.05 -0.55 -0.01 -0.43 -0.09 -0.04 0.31 -0.52 0.02 0.16 0.02 0.08 0.06 0.08 0.3 -0.04 -0.15 0.02 0.02 -0.13 0.02 0.14 0.25 0.05 0.06 -0.05 0.07 -0.15 -0.02 2.78 0.02 0.02 0.02 0.18 0.28 0.21 0.02 0.02 -0.07 -0.55 -0.35 -0.17 0.52 0.15 0.02 -0.46 0.33 0.2 At1g09510 264509_at (m)
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function, NOT a cinnamyl-alcohol dehydrogenase 2

lignin biosynthesis




0.76 3.96
At3g14690 0.514 CYP72A15 cytochrome P450 family protein 0.28 -0.6 -0.52 -1.83 -0.19 -0.13 -0.03 0.25 0.93 -0.03 -0.11 -0.11 0.27 -0.78 0.78 -0.2 0.13 0.34 0.96 -0.12 -0.16 0.56 0.53 -0.31 -0.35 -0.31 -0.79 0.05 -0.42 -0.06 0.26 0.75 0.44 0.11 0.2 -0.2 0.91 -0.15 0.74 -0.07 -0.07 -0.07 -0.07 0.52 0.09 0.33 -0.25 0.48 0.62 0.67 0.14 0.17 -0.33 0.27 0.4 0.02 -0.25 -0.07 0.34 0.41 -0.05 0.09 -0.05 -1.22 0.19 0.45 0.22 0.4 0.2 0.31 -0.52 -0.08 0.46 -0.14 0.51 0.24 0.15 0.31 -0.11 -0.05 0.01 0.05 0.22 -0.03 -0.05 0.14 0.28 -0.27 -1.57 -1.55 0.44 0.37 0.3 -0.21 0.3 -0.04 -0.32 -0.69 0.06 0.26 -0.04 0.22 0.28 -0.2 -0.01 0.02 -0.42 -0.06 -0.17 -0.17 -0.57 -0.32 -0.07 -0.04 -0.43 -0.96 -0.56 0.05 -1.48 -0.15 -0.37 0.11 0.18 0.16 -0.49 3.93 -0.61 -0.12 -0.07 -0.09 -0.22 -0.12 0.19 0.11 -0.91 -0.8 0.3 1.1 -0.09 0.04 0.09 -0.35 -0.09 -0.12 At3g14690 258094_at CYP72A15 cytochrome P450 family protein 1






cytochrome P450 family 1.52 5.76
At3g23490 0.514 CYN cyanate lyase family -0.17 -0.09 -0.16 -0.86 -0.1 0.08 -0.08 0.1 0.19 0.11 -0.21 0.23 0.08 0.03 -0.23 -0.15 -0.02 0.04 0.09 0.08 0.15 0.28 0 -0.06 0.17 -0.02 0.17 -0.04 0.13 -0.04 -0.02 0.23 0.09 0.12 -0.12 0.15 -0.11 0.01 -0.1 0.02 0.02 0.02 0.02 0.09 -0.28 0.28 -0.25 -0.28 -0.37 -0.48 -0.38 -0.14 -0.01 0.69 0.37 0 0.21 0.02 0.23 0 0.26 0.1 0.14 -0.85 -0.08 -0.22 -0.39 -0.2 -0.3 -0.28 -0.22 0.18 0.02 0.28 0.03 -0.03 -0.13 0.19 -0.02 -0.01 -0.06 -0.15 0.46 -0.09 0.17 -0.11 -0.42 0.18 -1.64 -2.44 -0.14 -0.1 -0.12 0.32 0.05 0 0.04 -0.26 0.82 0.65 0.15 0.34 0.48 0.03 -0.09 0.14 -0.47 -0.07 0.15 -0.11 -0.25 0.09 -0.11 0.11 0.19 -0.28 0.6 -0.04 0.25 -0.04 0.07 -0.03 0.02 0.04 -0.09 4 0.06 -0.12 0.02 -0.35 0.01 -0.11 0.05 -0.33 0.06 -0.25 -0.21 -0.13 0.18 0.4 0.1 0.26 0.24 -0.26 At3g23490 257177_at CYN cyanate lyase family 2


Nitrogen metabolism



0.78 6.44
At5g13980 0.508
glycosyl hydrolase family 38 protein, similar to alpha-mannosidase from (Homo sapiens) -0.06 0.11 0.19 0.93 -0.05 -0.07 0.06 0.17 0.07 -0.15 0.39 -0.11 -0.18 0 0.14 0.01 0.15 0.27 0.07 0.04 -0.07 0.13 -0.15 -0.1 0.17 0 0.05 -0.21 -0.01 -0.28 0.13 -0.02 0.34 -0.17 -0.03 -0.07 -0.48 0.04 0.01 -0.03 -0.03 -0.03 -0.03 -0.2 0.15 0.03 0.25 0.71 0.18 0.38 0.26 0.25 0.28 -0.56 -0.61 0.08 -0.1 0 0.35 -0.11 -0.1 -0.06 -0.21 0.78 -0.15 -0.13 -0.24 -0.19 -0.08 -0.24 0.27 -0.19 0.31 0.09 -0.22 0.09 0.76 0.19 0.26 -0.19 -0.12 -0.13 -0.1 0.02 0.15 -0.25 -0.09 0.1 -1.97 -1.98 0.16 0.21 -0.1 -0.03 0.08 -0.04 -0.06 -0.02 0.28 -0.25 0.2 0.22 -0.42 0.1 -0.05 -0.12 -0.92 -0.38 0.42 -0.34 -0.21 -0.04 -0.45 0.08 0.14 -0.23 0.35 0.13 1.07 0.02 -0.34 -0.15 0.07 0.06 -0.02 2.19 -0.45 -0.12 -0.03 0.43 0.07 0.38 0.31 0.18 -0.38 -0.28 0.2 0.19 0.31 0.01 0.02 -0.39 -0.67 -0.25 At5g13980 250203_at
glycosyl hydrolase family 38 protein, similar to alpha-mannosidase from (Homo sapiens) 2


Glycan Biosynthesis and Metabolism | N-Glycan degradation



0.87 4.17
At4g38570 0.503
similar to phosphatidylinositol synthase (PIS1) - Arabidopsis thaliana -0.19 -0.25 0.15 -0.93 0.04 0.08 -0.34 0.07 -0.61 0.18 0.21 0.1 -0.04 0.31 0.23 0.08 -0.06 -0.02 -0.55 -0.03 0.24 -0.34 -0.28 -0.37 0.28 0.28 0.27 0.06 0.44 -0.02 0.27 -0.16 -0.12 0.07 0.31 0.13 0 -0.14 -0.07 0.05 0.05 0.05 0.05 -0.01 -0.11 -0.14 -0.11 -0.19 -0.33 -0.32 -0.17 -0.18 0.44 0.02 -0.28 0.21 0.18 -0.03 0.43 -0.2 0.12 -0.09 0.01 -0.45 0.08 -0.09 -0.24 -0.14 -0.25 -0.08 0.28 0.02 0.17 0.4 0.17 -0.15 0.5 0.41 -0.01 0.15 0.24 0.16 0.33 0.14 0.21 -0.25 0.17 0.34 -0.65 -0.63 0.04 -0.39 -0.13 -0.02 -0.1 -0.23 -0.1 -1.02 0.36 -0.15 -0.24 -0.38 0.49 0.16 0.13 0.2 -0.31 -0.1 0.39 -0.15 0.26 -0.08 0.06 0.02 0.1 0.03 0.12 -0.19 0.67 -0.47 -0.28 -0.22 -0.07 -0.41 -0.07 1.45 0.09 0.08 0.05 -0.07 0 -0.13 0.32 0.14 0.53 0.17 -0.04 -0.46 0.23 0.28 -0.1 0.03 0.13 -0.21 At4g38570 252953_at
similar to phosphatidylinositol synthase (PIS1) - Arabidopsis thaliana 4 phosphatidylinositol biosynthesis lipid, fatty acid and isoprenoid biosynthesis phospholipid biosynthesis II Glycerophospholipid metabolism | Signal Transduction | Phosphatidylinositol signaling system Cell Wall Carbohydrate Metabolism | Phytic acid biosynthesis Synthesis of membrane lipids in endomembrane system

0.89 2.47
At5g42310 0.503
pentatricopeptide (PPR) repeat-containing protein -0.14 -0.22 0.12 0.42 0.12 0.03 0.32 0.1 0.22 -0.16 0.21 0.34 -0.03 -0.01 0.07 0.07 0 0.07 0.28 0.2 0.08 0.22 -0.33 -0.35 -0.9 0.03 -0.31 -0.01 -0.41 -0.03 0.06 0.31 -0.16 0.23 0.07 0.13 0.11 -0.12 0.06 0 0 0 0 0.33 -0.05 0.14 -0.05 -0.02 -0.11 0.04 -0.22 -0.08 -0.33 -0.43 0.35 -0.09 -0.08 0.09 0.32 0.11 -0.15 -0.22 -0.21 0.44 -0.22 -0.21 -0.34 -0.19 -0.05 0.23 -0.3 -0.11 0.17 -0.3 0.1 0.42 0.15 0.39 0.25 -0.49 0.05 0.16 0.15 0.11 -0.12 -0.82 0.04 0.26 -0.99 -1.07 0.19 0.35 0.25 0.01 0.06 -0.02 -0.14 0.12 -0.1 -0.07 0.55 0.39 -0.67 0.14 -0.41 -0.06 -0.78 -0.48 -0.13 0.04 -0.72 -0.17 0.67 -0.03 -0.1 -0.08 0.14 -0.1 -0.04 -0.38 -0.14 0.16 0.17 -0.05 0.18 3.45 -0.11 -0.12 0 -0.07 -0.53 -0.45 0.44 0.38 0.2 0.08 0.05 0.28 0.55 0.18 -0.04 -0.34 -0.16 -0.31 At5g42310 249247_at
pentatricopeptide (PPR) repeat-containing protein 2



mRNA processing in chloroplast


0.94 4.52



































































































































































page created by Juergen Ehlting 05/22/06