Co-Expression Analysis of: CYP88A4, KAO2 (At2g32440) Institut de Biologie Moléculaire des Plantes

















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap
































































































































































































































MS Excel table
































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.





























































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3






















































































































































































































greater than zero                                                         


























































































































































































































less than zero                                                         


























































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At2g32440 1.000 KAO2, CYP88A4 ent-kaurenoic acid hydroxylase / cytochrome P450 family protein -0.84 0.08 0.43 0.51 0.03 0.24 0.26 0 -0.57 -0.46 -0.07 0.19 -1.18 -0.06 -0.32 -0.89 0.03 0.13 -0.69 -0.17 -0.43 -1.04 0.1 0.06 -0.06 -0.04 0.07 -0.16 0.09 0.18 -0.38 -0.16 -0.08 0.05 -0.17 0.26 0.34 0.03 0.42 0.32 0.16 -0.07 -0.35 -0.21 -0.54 0.35 0.02 -0.22 0.01 -0.05 -0.5 0.03 -0.2 -0.12 -0.2 0.01 -0.63 0.08 -0.98 -0.24 -0.34 0.05 -0.11 -0.08 -0.14 0 0.15 0.27 0.07 0.06 0.53 0.2 0.35 0.53 0.19 0.05 0.6 -0.48 -0.09 0.42 0.25 0.21 0.11 -0.16 0.24 0.28 0.16 0.07 0.16 0.48 0.36 0.43 0.38 0.25 -0.21 -0.37 0.25 0.28 0.36 -0.11 -0.15 0.03 -0.04 0.33 -0.68 -0.68 -0.83 -1.15 0.52 0.06 -0.01 -0.35 0.14 0.34 0.13 0.64 0.23 -0.02 -0.34 -0.79 0.19 0.09 -0.08 -0.13 -0.17 -0.09 0.36 0.08 0.01 0.08 -0.27 0.08 0.02 0.12 0.43 -0.1 0.09 -0.07 0.11 -0.18 0.32 -0.56 0.08 0.04 0.23 0.34 0.19 -0.2 0.15 0.05 -0.67 0.34 0.15 0.23 -0.03 -0.16 0.24 -0.73 0.24 0.55 0.68 0.4 -0.33 -0.79 0.17 -0.09 0.64 0.46 0.41 0.28 0.04 -0.16 -0.04 0.24 0.25 0.54 -0.09 0.18 0.64 0.33 -0.11 0.09 0.2 -0.25 0.19 0.08 0.1 0.27 0 0.28 0.24 0.06 -0.36 0.07 -0.36 -1.12 -0.36 -0.33 -0.13 0.16 1 0.13 -1.18 -0.2 -1.72 0.91 -0.28 1.17 0.52 -0.03 0.22 -0.02 0.38 -0.99 0.78 At2g32440 266335_at KAO2, CYP88A4 ent-kaurenoic acid hydroxylase / cytochrome P450 family protein 10


Diterpenoid biosynthesis

Gibberellin metabolism | giberelin biosynthesis cytochrome P450 family, multifunctional ent-kaurenoic acid oxidase, gibberellin biosynthesis 1.34 2.89
At4g39970 0.757
haloacid dehalogenase-like hydrolase family protein -2.31 0.16 0.23 0.23 -0.16 -0.2 0.04 0.14 -0.59 -0.73 -0.06 0.47 -1.42 -0.1 -0.22 -1.43 0.18 0.15 -1.04 0.13 -0.56 -1.02 0.14 -0.34 -0.9 -0.37 0.05 -0.12 -0.12 -0.52 -0.64 -0.16 0.03 0.26 -0.39 0.25 0.31 0.46 0.26 0.44 0.23 -0.14 -0.4 -0.11 -0.56 0.44 -0.61 -0.44 -0.42 -0.68 0.08 0.3 -0.04 0.22 -0.39 0.13 -0.83 0.22 -0.68 0.23 -0.78 0.22 -0.13 0.5 -0.03 0.02 -0.18 -0.51 -0.04 -0.26 0.23 0.23 0.46 0.23 0.23 0.23 0.23 -0.54 0.05 0.43 0.99 0.51 0.63 0.34 0.23 0.23 0.23 0.23 0.23 0.23 0.25 0.54 0.75 0.53 0.48 -0.31 0.14 0.24 0.23 0.12 0.14 0.23 -0.09 0.09 0.13 -0.6 -1.57 -2.4 0.23 0.26 0.23 0.23 0.23 0.23 -0.02 0.42 0.33 -0.56 -0.62 -1.33 0.23 0.23 0.23 0.23 0.23 0.23 0.63 0.59 0.13 0.55 0.47 -0.17 0.17 0.03 0.23 -0.02 0.31 0.23 0.23 0.07 0.23 0.08 -0.59 -0.18 0.04 0.53 0.17 0.15 -0.1 -0.32 -0.39 0.23 0.23 0.23 0.23 0.23 0.23 -0.33 0.44 0.66 1.12 0.42 0.62 -0.17 0.07 -0.43 0.56 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.56 0.16 -0.11 0.23 0.3 -0.07 0.17 0 -0.92 -0.34 -0.68 -0.59 0.36 0.41 -0.26 -1.48 -1.2 -3.49 2.08 0.96 1.38 0.34 0.31 0.23 -0.56 0.18 -1.64 0.23 At4g39970 252876_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




1.60 5.57
At4g04350 0.736
similar to Leucyl-tRNA synthetase (Bacillus subtilis) -0.79 -0.48 0.3 0.04 0.02 -0.16 0.28 0.02 -1.2 -0.81 -0.44 -0.11 -1.7 -0.44 -0.66 -0.91 -0.05 -0.08 -0.53 -0.24 -0.65 -0.73 -0.28 -0.04 -0.24 0 0.28 -0.09 -0.15 -0.1 -0.37 0.02 0.41 0.01 -0.09 0.48 0.36 0.06 0.43 0.3 0.24 0.16 -0.04 -0.34 -0.92 0.23 -0.51 -0.85 -0.19 -0.45 0.07 0.31 -0.18 0.12 -0.3 -0.17 -0.86 0.13 -0.89 0.05 -0.65 0.09 -0.25 0.07 0.19 -0.08 -0.44 0.5 0.42 0.25 0.52 0.27 -0.17 0.21 0.19 -0.35 0.03 -0.7 0.45 0.18 -0.08 0.22 -0.02 -0.31 0.54 0.13 0.44 -0.06 -0.17 0.32 0.03 -0.02 0.05 0.21 -0.11 -0.22 0.56 0.19 0.54 0.15 0.06 -0.06 0.33 0.14 -0.61 -0.76 -1.27 -1.77 0.31 -0.13 0.24 -0.05 0.09 0.09 0.3 -0.11 -0.1 -0.02 -0.25 -0.9 0.37 0.01 0.15 0.32 0.02 -0.22 -0.12 -0.06 0.04 -0.19 -0.23 0.34 0.4 -0.37 0.2 0.28 -0.16 -0.05 0 0.22 0.16 -0.55 -1.35 0.41 0.32 0.06 0.06 0.03 -0.18 0.13 -0.08 0.36 0.09 0.65 -0.02 -0.17 -0.22 -0.52 0.24 0.45 0.56 0.11 -0.36 -0.4 -0.09 -0.05 0.47 0.22 0.65 0.5 0.13 0.49 0.28 0.56 0.52 0.45 0.38 0.38 0.38 0.4 0.1 -0.02 0.08 0.33 0.38 0.52 0.36 0.61 0.18 0.28 0.45 0.31 0.3 -0.15 0.08 -0.32 0.16 -0.17 -0.15 0.28 0.1 0.28 -1.12 -0.28 -2.65 1.23 0.75 2.29 0.37 0.33 0.24 0.64 0.05 -0.24 2 At4g04350 255328_at
similar to Leucyl-tRNA synthetase (Bacillus subtilis) 2
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway Valine, leucine and isoleucine biosynthesis | Aminoacyl-tRNA biosynthesis



1.42 4.95
At5g52100 0.732
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) -0.7 -0.2 0.31 0.31 0.06 0.31 0.31 0.95 -1.87 -1.36 -0.22 -0.15 -2.63 -0.02 -1.05 -1.41 -0.15 -0.01 -1.12 -0.27 -0.61 -0.94 -0.06 -0.03 -0.52 -0.08 0.4 -0.06 -0.2 -0.33 -0.41 0.15 0.05 -0.03 -0.59 0.31 0.45 0.56 0.31 0.28 0.68 0.44 0.06 -0.28 -1.62 0.38 0 -0.79 -0.69 -0.65 0 0.7 0.05 0.51 -0.33 0.22 -0.89 0.37 -0.87 0.13 -0.84 0.55 -0.25 0.13 -0.21 -0.34 -0.04 0.14 -0.22 0.07 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.81 0.11 0.17 0.63 0.48 0.37 0.06 0.31 0.31 0.31 0.31 0.31 0.31 0.62 0.37 0.57 0.28 -0.22 0 0.31 0.31 0.31 0.31 0.31 0.31 0.61 0.18 -0.42 -1.03 -2 -2.15 0.31 0.31 0.31 0.31 0.31 0.31 0.42 0.2 0.05 -0.46 -0.8 -1.12 0.31 0.31 0.31 0.31 0.31 0.31 0.35 0.16 0 0.33 0.2 0.19 -0.15 0.05 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 -0.5 -0.28 -0.68 0.71 0.86 0.27 -0.1 -0.72 -1.4 0.31 0.31 0.31 0.31 0.31 0.31 0.11 0.77 0.31 0.67 0.5 0.44 0.38 0.61 0.35 0.34 0.61 0.31 0.31 0.31 0.16 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 0.24 -0.42 -1.04 -0.48 -0.14 -0.12 0.35 0.34 -0.14 -2.15 -1.93 -1.87 0.12 -0.57 1.26 0.16 0.65 0.31 -0.53 0.31 -2.25 0.31 At5g52100 248402_at
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) 2

lysine biosynthesis I Lysine biosynthesis Biosynthesis of Amino Acids and Derivatives | Lysin from aspartate


1.99 3.89
At3g63190 0.731
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); -0.52 0 0.23 1.07 -0.23 -0.4 -0.11 -0.19 -1.35 -1.34 -0.24 0.15 -2.72 -0.26 -0.86 -1.56 -0.08 -0.14 -0.83 -0.11 -0.87 -1.06 0 -0.28 -0.52 -0.17 0.04 -0.05 -0.01 -0.21 -0.56 -0.03 0.22 0.18 -0.48 0.37 0.43 0.34 0.23 0.26 0.44 0.17 0.16 -0.41 -1.4 0.14 0.03 -0.62 -0.74 -0.41 0.02 0.49 -0.24 0.32 -0.53 0.17 -0.87 0.32 -0.89 0.54 -0.83 0.28 -0.17 0.55 0.42 0.14 -0.15 -0.36 0.2 0.17 0.52 0.22 0.19 0.18 0.5 0.77 0.21 -0.43 0.33 0.48 0.76 0.38 0.44 0.27 0.46 0.24 0.31 0.32 0.17 -0.04 0.33 0.57 0.57 0.18 0.05 -0.1 0.26 0.39 0.49 0.42 0.24 -0.22 0.12 -0.01 -0.3 -1.38 -1.62 -1.93 0.35 0.16 -0.04 -0.17 0.23 0.17 0.06 0.42 0.16 -0.55 -0.54 -1.14 0.43 0.17 -0.14 0.08 0.13 -0.28 0.05 0.59 0.46 0.44 0.34 -0.45 -0.05 -0.03 0.17 0.3 0.54 0.51 0.39 0.42 0.31 0.11 -0.57 0.2 0.11 0.48 0.44 0.07 0.08 -0.05 0.11 0.44 0.21 -0.01 -0.09 0.08 -0.09 -0.33 0.23 0.3 0.88 0.56 0.48 0.3 -0.28 -0.14 0.38 0.38 0.35 0.16 -0.03 -0.05 0.57 0.37 0.49 0.24 -0.07 -0.27 -0.56 -0.63 -0.37 -0.06 0.17 0.23 0.12 0.1 -0.08 0.46 0.35 0.37 0.01 0.59 0.05 0.03 -0.04 -0.86 -0.02 0.27 -0.19 0.04 0.4 -0.01 -0.97 -0.28 -2.96 1.31 -0.04 2.31 0.09 -0.33 0.47 -0.12 0.06 -0.67 1.55 At3g63190 251172_at
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); 4
protein synthesis | biogenesis of chloroplast
Translation factors



1.58 5.29
At4g31850 0.730 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs -0.84 0.24 0.25 -0.4 -0.22 -0.68 -0.41 -0.42 -1.5 -0.82 -0.57 -0.09 -1.79 -0.61 -0.96 -1.3 -0.44 0.06 -0.55 -0.37 -0.83 -0.78 -0.04 -0.24 -0.62 -0.07 0.14 0.05 -0.01 -0.51 -0.41 0.16 0.07 -0.09 -0.34 0.28 0.22 0.14 0.05 0.33 0.24 -0.01 -0.34 -0.32 -1.02 -0.13 -0.66 -0.89 -0.57 -0.45 -0.04 0.48 0.08 0.23 -0.14 -0.04 -1.22 -0.01 -1.09 0.12 -0.92 0.49 -0.12 0.01 0.2 -0.24 -0.09 0.25 -0.04 0.1 0.2 0.43 0.47 0.36 0.19 0.15 0.56 -1.34 0.3 0.34 0.2 0.16 -0.1 -0.57 0.52 0.21 0.37 0.22 0.35 0.54 0.41 0.01 0.45 0.32 -0.34 -0.18 0.22 -0.14 0.56 0.47 0.3 0.19 0.26 0.21 -0.77 -0.79 -1.92 -1.41 0.78 0.65 0.4 0.56 0.47 0.66 0.33 0.2 -0.15 -0.59 -0.93 -0.98 0.47 0.42 -0.19 0.04 0.61 0.02 0.02 0.53 -0.01 -0.07 -0.1 0.17 -0.14 0.02 -0.15 0.02 0.11 0.13 0.35 0.66 0.43 -0.63 -1.19 0.34 0.06 0.53 0.25 0.16 -0.12 -0.3 -0.1 0.56 0.59 0.65 0.6 0.63 0.56 -0.89 -0.22 0.05 0.53 0.49 -0.25 -0.76 0.55 0.67 0.31 0.14 0.17 0.64 -0.22 0.52 -0.07 0.69 0.57 0.65 -0.23 0.48 0.84 0.6 0.44 0.3 0.09 0.26 0.2 0.56 0.35 0.52 0.38 0.6 0.55 0.6 0.44 0.39 -0.09 -0.87 -0.37 -0.1 0.16 0.09 0.19 0.43 -1 -0.35 -2.29 0.65 0.75 2 0.19 0.04 0.42 0.28 0.83 -1.11 0.54 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


1.69 4.31
At4g14890 0.728
ferredoxin family protein -0.76 0.22 0.17 1.12 -0.43 -0.84 -0.41 -0.39 -2.12 -0.82 -0.68 -0.11 -2.75 -0.31 -1 -1.22 -0.34 0 -0.46 -0.51 -0.74 -0.6 0.15 -0.08 -0.25 -0.09 0.08 0.01 -0.03 -0.26 -0.35 -0.18 0.18 0.13 -0.81 0.18 0.3 0.44 0.32 0.28 0.39 0.22 0.3 -0.23 -1.14 0.28 0.03 -0.95 -0.24 -0.06 -0.06 0.13 -0.06 0.14 -0.31 -0.01 -1.22 0.08 -1.13 -0.12 -1.07 0.16 -0.04 0.28 0.27 -0.34 -0.16 -0.08 0.2 -0.41 0.85 0.14 -0.33 0.13 0.21 0.46 0.94 -0.87 0.31 0.32 0.76 0.32 0.6 -0.07 0.49 0.24 0.01 0.35 0.41 0.99 0.49 0.36 0.51 0.37 -0.23 -0.33 0.23 0.26 0.32 0.08 0.13 0.28 0.48 0.16 -0.69 -0.83 -1.35 -2.25 -0.32 -0.27 -0.2 -0.2 0.01 0 0.19 0.34 -0.03 -0.4 -0.43 -1.13 -0.23 -0.14 -0.39 -0.8 0.06 0.87 0.19 0.28 0.17 0.08 0.21 0.11 0.24 -0.13 0.74 0.13 0.19 0.36 -0.02 0.28 0.74 -0.83 0.03 0.31 -0.59 0.85 0 0.4 -0.02 -0.48 -1.12 0.46 0.92 -0.14 0.12 -0.07 -0.13 -1.23 -0.06 0.19 0.65 0.8 0.68 0.46 0.67 0.5 0.35 0.18 0.78 0.13 0 0.33 0.66 0.52 0.36 1.12 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.49 0.2 0.64 0.08 0.56 0.45 0.56 0.72 0.53 0.77 0.53 -0.38 -1.33 -0.02 -0.31 0.33 -0.03 0.12 -0.28 -0.93 -0.92 -2.65 2.12 1.21 0.95 0.53 -0.2 0.42 0.39 0.35 -2.91 2.67 At4g14890 245347_at
ferredoxin family protein 2
transported compounds (substrates) | electron / hydrogen transport | transport facilitation
Photosynthesis Photosystems | Ferredoxin


1.99 5.58
At1g78630 0.721
ribosomal protein L13 family protein -0.96 0.07 0.2 0.51 -0.16 -0.22 0.12 -0.03 -1.36 -1.32 -0.17 0.12 -2.75 -0.04 -0.7 -1.43 0.16 -0.1 -0.98 0.04 -1.03 -1.38 -0.09 -0.17 -0.6 -0.45 0.03 0.06 -0.11 -0.31 -0.69 -0.11 0.07 0.15 -0.19 0.38 0.43 0.53 0.16 0.21 0.55 0.28 -0.17 -0.38 -1.7 0.11 0.13 -0.44 -0.8 -0.71 -0.12 0.35 -0.25 0.19 -0.17 0.2 -0.56 0.28 -0.53 0.17 -0.56 0.24 0.02 0.47 0.35 0.18 -0.02 -0.28 0.21 -0.08 0.48 0.41 -0.06 0.4 0.21 0.42 0.53 -0.19 0.39 0.37 0.56 0.11 0.28 0.02 0.25 0.11 0.34 0.17 0.33 0.08 0.35 0.37 0.47 0.24 0 -0.23 0.3 0.07 0.44 0.1 0.13 -0.11 0.25 0.24 0.04 -0.86 -1.29 -1.96 0.27 -0.24 0.34 -0.21 0.25 -0.01 0.28 0.22 0.22 -0.36 -0.38 -0.79 0.46 -0.28 -0.49 -1.02 -0.15 -0.26 -0.07 0.52 0.19 0.17 0.12 -0.28 -0.08 -0.03 0.39 0.28 0.03 0.33 -0.09 0.34 0.5 0.04 -0.39 -0.02 -0.05 0.39 0.49 -0.01 -0.23 -0.22 -0.09 0.35 0.1 0.52 -0.04 0.45 0.13 0.18 0.41 0.42 0.62 0.56 0.55 0.56 0.01 -0.17 0 0.22 0.35 0.11 -0.02 0.37 -0.15 0.06 0.45 0.54 -0.06 0.05 0.18 -0.28 -0.03 -0.17 0.59 0.22 0.18 0.27 -0.08 0.61 0.07 0.42 0.19 0.48 0.1 0.16 -0.01 -0.56 -0.14 0 -0.23 -0.14 0.47 -0.22 -0.56 -0.39 -3.86 1.6 0.61 2.48 0.41 0.01 0.39 -0.06 0.1 -0.33 2.2 At1g78630 263131_at
ribosomal protein L13 family protein 2


Ribosome



1.54 6.34
At5g47840 0.721
similar to Adenylate kinase, chloroplast (Zea mays) -0.27 0.17 0.1 0.56 -0.18 -0.38 -0.2 -0.3 -0.65 -0.53 -0.15 0.12 -1.03 -0.16 -0.56 -0.77 0.01 0.07 -0.44 -0.17 -0.54 -0.6 -0.09 -0.26 -0.34 -0.1 0.01 -0.04 -0.1 -0.19 -0.06 -0.09 0.03 0.17 -0.15 0.21 0.23 0.26 0.04 0.23 0.23 0.18 0 -0.21 -0.61 0.13 0.07 -0.5 -0.17 -0.39 0.08 0.24 -0.06 0.1 -0.19 -0.12 -0.64 0.08 -0.63 0.08 -0.43 0.21 0.11 0.13 0.09 -0.05 -0.08 0 0.07 0.26 0.31 0.33 0.23 0.39 0.17 0.13 0.12 -0.34 0.03 0.22 0.45 0.28 0.15 -0.13 0.28 0.04 0.23 -0.01 0.03 0.24 0.22 0.12 0.34 0.28 0.06 -0.17 0.44 0.28 0.36 0.16 0.09 0.19 0.08 -0.01 0.07 -0.42 -0.88 -1.13 0.14 0.25 0.23 -0.03 0.24 -0.05 0.12 0.3 0.3 0.06 -0.1 -0.32 0.33 0.19 -0.02 -0.52 -0.21 -0.27 0.24 0.21 0.17 0.21 0.22 0.06 0.06 -0.01 0 0.1 0.07 0.18 0.02 0.09 0.07 -0.02 0.4 -0.16 -0.36 0.32 0.05 -0.02 0.11 -0.24 -0.53 0.09 0 -0.11 -0.16 -0.24 -0.3 -0.27 -0.04 0.26 0.59 0.28 0.37 0.12 0.03 -0.39 0.22 0.34 0.41 0.44 0.8 0.65 0.23 0.11 0.48 0.41 -0.08 0.04 -0.16 0.13 -0.02 -0.27 0.3 -0.13 0.32 0.37 0.12 0.23 0.24 0.22 0.08 0.36 0.04 -0.03 -0.18 -0.46 -0.13 -0.05 -0.16 0.21 0.33 -0.43 -0.42 -0.52 -1.52 0.04 -0.52 0.91 -0.05 0.1 0.18 -0.4 0.15 -0.76 0.67 At5g47840 248748_at
similar to Adenylate kinase, chloroplast (Zea mays) 4
nucleotide metabolism de novo biosynthesis of purine nucleotides I Nucleotide Metabolism | Purine metabolism



0.99 2.43
At3g24430 0.714 HCF101 encodes a MRP-like protein with a nucleotide-binding domain. -0.4 0.21 0.52 1.68 0.12 -0.11 -0.02 -0.09 -1.79 -0.97 -0.03 -0.08 -2.93 -0.2 -0.56 -0.99 0.02 -0.28 -0.74 -0.02 -0.7 -1 -0.14 -0.13 -0.64 -0.08 0.26 0.06 -0.05 -0.31 -0.32 0.24 0.17 0.14 -0.33 0.22 0.3 0.25 0.33 0.12 0.18 -0.04 -0.44 -0.16 -1.27 0.19 -0.03 -0.86 -0.52 -0.38 0.38 0.34 0.05 0.06 -0.28 0.17 -0.86 0.16 -0.96 -0.06 -0.76 0.35 0.06 0.34 0.24 0.17 -0.19 0 0.16 0.38 0.42 0.28 0.25 0.28 0.03 -0.03 0.19 -0.63 0.27 0.26 0.21 0.09 0.28 -0.15 0.37 0.18 0.53 0.01 0.05 -0.08 0.27 0.2 0.38 0.33 0.17 0.08 0.17 0.12 0.42 0.19 -0.03 0.05 0.06 0.23 -0.07 -0.94 -1.11 -1.69 0.38 -0.09 0.06 0.03 -0.11 0.12 0.26 0.3 0.19 -0.39 -0.59 -1.06 0.36 -0.13 -0.2 0.14 -0.37 -0.06 0.43 0.64 0.13 0.18 0.13 -0.09 0.12 0.18 0.53 0.02 -0.13 0.07 0.2 0.2 0.28 -0.12 -1.05 0.34 0.54 0.31 0.23 0.22 0.24 0.24 -0.16 0.33 0.35 0.44 0.44 -0.33 -0.05 -0.04 0.55 0.03 0.71 0.28 0.21 -0.48 -0.28 -0.06 0.51 0.33 0.69 0.3 -0.01 -0.43 0.07 0.51 0.27 0.09 0.08 0.12 0.04 -0.24 0.07 -0.18 0.35 0.55 0.57 0.18 0.12 0.75 0.33 0.24 0.21 0.7 0.03 0.15 0.05 -0.62 -0.16 -0.06 -0.15 0.1 0.27 0.17 -0.96 -1.26 -4.8 2.31 1.46 1.49 0.79 0.39 0.31 0.06 0.39 -0.54 -0.08 At3g24430 257168_at HCF101 encodes a MRP-like protein with a nucleotide-binding domain. 10



Thylakoid biogenesis and photosystem assembly


1.54 7.11
At3g56650 0.711
thylakoid lumenal 20 kDa protein 0.03 0.08 0.17 0.17 -0.33 -0.22 0.14 -0.16 -1.03 -0.83 -0.2 -0.05 -1.4 -0.01 -0.55 -0.82 0.15 0.06 -0.55 -0.02 -0.71 -0.75 0.1 -0.14 -0.33 -0.08 0.21 -0.05 0.04 -0.2 -0.37 -0.04 -0.02 0.12 -0.36 0.44 0.41 0.54 0.34 0.35 0.52 0.49 0.02 -0.41 -1.25 -0.3 0.24 -0.7 -0.61 -0.39 0.07 0.21 -0.11 0.18 -0.26 0.02 -0.86 0.2 -0.83 0.11 -0.65 0.35 -0.12 0.17 -0.09 -0.1 -0.28 -0.16 -0.18 0.01 0.3 0.32 0.57 0.35 0.48 0.06 0.46 -0.6 0.08 0.11 0.25 0.16 0 -0.13 0.28 0.3 0.18 0.14 0.27 0.39 0.11 -0.01 0.28 0.34 0.09 0.11 0.43 0.35 0.24 0.48 0.47 0.54 0.04 0.01 -0.37 -1.07 -1.6 -1.96 0.61 0.01 0.37 0.23 0.22 0.25 0.21 0.09 -0.11 -0.52 -0.48 -1.03 0.46 0.32 0.48 0.79 0.64 0.2 0.3 0.24 -0.11 0.19 0.11 -0.05 -0.11 -0.21 0.1 0.37 -0.14 0.06 0.28 0.02 0.04 -0.12 -0.23 -0.1 -0.57 0.22 0.25 -0.05 -0.43 -0.42 -0.39 0.46 0.33 0.21 -0.04 0.75 0.39 -0.46 0.21 0.17 0.47 0.3 0.37 -0.19 -0.5 -0.35 0.04 0.11 0.38 0.39 0 0.28 0.44 0.46 0.31 0.09 -0.06 0.33 0.33 0.7 0.42 0.55 -0.17 0.17 0.31 0.41 0.17 0.22 0.18 0.3 0.27 0.33 0.12 0.19 -0.26 -1.14 -0.47 -0.04 -0.11 0.16 0.52 -0.61 -0.66 -1.19 -2.35 1.19 0.42 1.36 0.14 0.17 0.02 -0.07 0.17 -0.62 0.17 At3g56650 251701_at
thylakoid lumenal 20 kDa protein 6



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.37 3.72
At1g01080 0.707
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative -0.53 0.05 0.25 -0.07 -0.1 -0.51 -0.35 -0.2 -1.83 -1.17 -0.46 -0.27 -2.48 -0.39 -0.84 -1.28 -0.12 -0.14 -0.82 -0.28 -0.83 -0.98 0.05 -0.34 -0.52 -0.16 0.1 0.03 -0.19 -0.19 -0.56 -0.12 0.05 0.08 -0.4 0.39 0.39 0.33 0.25 0.26 0.39 0.27 0.01 0.04 -0.98 0.15 -0.24 -0.35 -0.41 -0.37 -0.04 0.31 -0.23 0.13 -0.38 0.11 -1.05 0.16 -1.06 0.11 -0.75 0.22 -0.28 0.49 0.33 -0.07 -0.17 0.04 0.13 -0.08 0.38 0.07 0.23 0.41 0.32 0.26 0.63 -0.75 0.25 0.31 0.61 0.54 0.3 0.07 0.52 0.11 0.38 0.31 0.19 0.63 0.21 0.42 0.37 0.46 0.25 -0.02 0.02 0.41 0.44 0.64 0.5 0.62 0.05 0.3 -0.48 -1.19 -1.67 -1.98 0.54 0.44 0.28 0.63 0.44 0.48 0.12 0.21 -0.08 -0.65 -0.66 -1.09 0.3 0 -0.35 -0.42 0.42 0.49 0.1 0.66 0.28 0.23 0.16 0.01 0.08 -0.15 0.02 0.31 0.27 0.26 0.45 0.46 0.34 -0.31 -0.56 0.17 -0.59 0.54 0.35 0.07 -0.1 -0.55 -0.36 0.22 0.3 0.17 0.79 0.15 -0.1 -0.56 0.11 0 0.67 0.55 0.03 -0.79 -0.26 0.22 0.34 0.08 0.38 0.56 0.14 0.3 0.28 0.64 0.57 0.37 -0.38 -0.67 -0.63 -0.83 0.21 0.26 0.56 0.39 0.56 0.4 0.12 0.59 0.5 0.51 0.46 0.76 0.1 0.16 -0.15 -0.65 -0.11 -0.04 0.32 0.03 -0.01 -0.22 -0.1 -0.75 -2.94 1.87 0.76 1.4 0.49 0.08 0.06 0.3 0.23 -1.25 1.53 At1g01080 261577_at
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 4



mRNA processing in chloroplast


1.68 4.81
At3g55330 0.707
photosystem II reaction center PsbP family protein -1.46 0.12 -0.31 1.01 0.17 -0.1 -0.06 -0.14 -1.9 -1.15 -0.05 -0.14 -3.26 -0.05 -0.89 -1.8 0.05 -0.15 -0.82 -0.07 -0.73 -1.15 0.1 -0.18 -0.47 -0.19 0.18 0.09 0.02 -0.21 -0.5 -0.14 0.27 -0.03 -0.52 0.49 0.43 0.47 0.2 0.24 0.41 0.33 -0.06 -0.25 -1.35 0.37 -0.02 -0.69 -0.67 -0.68 0.15 0.3 -0.14 0.33 -0.33 0.34 -0.76 0.35 -0.75 0.34 -0.65 0.33 -0.15 0.22 0.08 -0.15 -0.18 -0.11 -0.05 -0.1 0.28 0.38 0.23 0.1 0.3 0.23 0.23 -0.41 0.31 0.35 0.5 0.42 0.37 0.24 0.23 0.23 0.23 0.23 0.23 0.23 0.27 0.21 0.28 0.12 -0.05 0.15 0.08 0.3 0.23 0.44 0.23 0.23 0.27 0.39 -0.21 -1.27 -2.06 -2.38 0.23 0.23 0.23 0.23 0.23 0.23 0.35 0.53 -0.2 -0.74 -0.76 -0.7 0.23 0.23 0.23 0.23 0.23 0.23 0.25 0.63 0.26 0.31 0.26 0.23 -0.03 0.18 0.23 0.23 0.52 0.23 0.23 0.23 0.23 0.06 -0.78 0.2 -0.39 0.6 0.4 0.4 0.11 -0.68 -0.23 0.23 0.23 0.04 0.23 0.23 0.23 -0.2 0.12 0.23 0.51 0.39 0.34 0.11 -0.17 0.13 0.1 0.25 0.23 0.75 0.23 0.23 0.23 0.23 0.35 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.43 0.23 0.23 0.42 0.05 0.23 0.09 -0.82 -0.37 0.06 -0.03 0.31 0.19 -0.53 -0.67 -1.3 -3.5 2.73 0.82 1.15 0.64 0.17 0.28 -0.28 0.04 -0.43 0.55 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.67 6.23
At1g08520 0.705
Similar to Mg-chelatase from Nicotiana tabacum and from Pisum sativum 0.27 0.12 -0.07 -0.07 -0.07 -0.46 -0.33 -0.25 -0.86 -0.68 -0.49 -0.01 -1.25 -0.27 -0.62 -0.89 -0.16 -0.09 -0.51 -0.28 -0.64 -0.66 -0.01 -0.16 -0.63 -0.17 0.27 0.13 -0.02 -0.15 -0.23 -0.02 -0.03 0.09 -0.28 0.2 0.27 0.27 0.18 0.12 0.37 0.36 -0.05 -0.33 -1.09 0.18 0.23 -0.77 -0.56 -0.17 0.03 0.25 -0.14 -0.02 -0.28 0.01 -0.94 0.01 -0.96 -0.07 -0.84 0.14 -0.02 0.3 0.07 0.01 -0.33 -0.22 0.18 0.18 0.56 0.1 0.14 0.46 0.61 0.19 0.36 -0.73 0.28 0.35 0.26 -0.01 0.11 -0.24 0.1 0.12 0.53 0.3 0.22 0.55 0.36 0.28 0.2 0.05 -0.06 -0.25 0.11 0.19 0.35 0.17 -0.08 0.27 0.24 0.27 -0.47 -0.84 -0.88 -1.35 -0.1 0.02 0.78 0.73 0.6 0.72 0.12 0.22 -0.01 -0.33 -0.18 -0.89 0.21 -0.05 0.04 -0.3 0.03 0.3 -0.23 0.27 -0.01 0.16 -0.11 -0.22 0.05 -0.01 0.52 -0.2 -0.21 0.42 0.41 0.3 0.14 -0.35 0.1 0.01 -0.36 0.21 -0.08 -0.28 -0.4 -0.1 -0.56 0.09 0.1 0.31 -0.1 0.05 0.45 -0.35 0.21 0.15 0.38 0.3 0.61 -0.23 -0.23 -0.66 0.09 -0.14 0.51 0.09 0.59 1.26 0.75 0.43 0.42 0.17 -0.03 -0.05 -0.04 -0.24 -0.21 0.06 0.14 0.52 0.45 0.3 0.06 0.83 0.34 0.39 0.28 0.31 0.1 0.44 -0.32 -0.89 0.03 -0.2 -0.12 0.21 0.35 -0.02 -1.08 -0.42 -2.49 1.12 0.15 2.29 0.38 -0.06 0.28 -0.42 0.18 -0.53 1.37 At1g08520 261695_at
Similar to Mg-chelatase from Nicotiana tabacum and from Pisum sativum 10 chlorophyll biosynthesis
chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.47 4.78
At1g48350 0.700
ribosomal protein L18 family protein -0.43 0.1 0.52 0.35 -0.01 -0.47 0.01 -0.13 -1.9 -1 -0.28 -0.02 -2.97 -0.19 -0.57 -1.23 0.01 0.03 -0.8 -0.14 -1.04 -0.99 -0.08 -0.04 -0.61 -0.13 0.22 0.15 0.16 -0.43 -0.48 0.04 0.24 0.2 -0.21 0.4 0.61 0.65 0.24 0.33 0.5 0.56 0.11 -0.26 -1.43 0.21 0.51 -0.64 -0.65 -0.45 0.19 0.43 -0.15 0.3 -0.5 0.26 -0.93 0.38 -0.82 0.16 -0.84 0.34 0 0.47 0.46 0.08 0.01 -0.06 0.07 0.22 0.06 0.46 0.18 0.84 0.3 0.24 0.37 -0.31 0.48 0.24 0.16 -0.08 -0.07 -0.32 0.16 0.08 0.34 -0.01 0.14 0.56 0.18 -0.02 0.08 -0.05 -0.43 -0.07 0.31 0.12 0.54 -0.01 0.06 0.01 0.23 0.25 -0.18 -1.22 -1.85 -2.37 0.22 0.07 0.17 -0.09 0.41 -0.01 0.33 0.28 0.13 -0.39 -0.55 -0.93 0.34 -0.15 -0.22 -0.67 -0.32 -0.28 0.04 0.61 0.05 -0.08 -0.18 -0.28 -0.07 0.05 0.32 -0.03 -0.23 0.18 -0.08 0.3 0.42 0.13 -0.39 0.05 -0.3 0.37 0.59 0.1 -0.32 -0.11 0.09 0.56 0.26 0.75 0.01 0.3 -0.11 -0.18 0.07 0.22 0.6 0.6 0.37 0.19 -0.3 -0.2 0.07 0.27 0.27 0.48 0.05 0.74 0.19 0.28 0.68 0.5 0.26 0.18 -0.06 -0.43 -0.34 0.06 0.56 0.67 0.43 0.51 0.15 0.67 -0.07 0.23 0.46 0.68 0.15 0.21 -0.22 -0.91 0 0.28 0.1 0.16 0.38 -0.35 -0.38 -0.34 -3.21 1.81 0.87 1.29 0.07 0.22 0.27 0.02 -0.03 -0.56 1.95 At1g48350 262235_at
ribosomal protein L18 family protein 2


Ribosome



1.60 5.16
At2g43030 0.700
ribosomal protein L3 family protein -0.73 0.19 0.11 -0.02 -0.2 -0.79 -0.19 -0.3 -1.8 -0.99 -0.28 0.13 -2.99 -0.31 -0.72 -1.51 -0.02 0 -0.85 -0.26 -0.86 -1.03 0.06 -0.03 -0.41 -0.23 0.13 -0.02 0.06 -0.27 -0.61 -0.27 0.36 0.02 -0.45 0.28 0.38 0.4 0.17 0.25 0.39 0.23 -0.15 -0.25 -1.45 0.03 0.09 -0.38 -0.36 -0.35 0.09 0.3 -0.1 0.18 -0.35 0.12 -0.95 0.21 -0.77 0.05 -0.7 0.19 -0.08 0.15 0.28 -0.17 -0.25 -0.17 0.06 0.14 0.66 0.16 0.17 0.61 0.45 0.34 0.49 -0.26 0.37 0.23 0.28 0.05 0.16 0.07 0.16 0.22 0.52 0.37 0.05 0.5 0.25 0.09 -0.01 -0.02 -0.15 0 0.18 0.28 0.55 0.01 -0.13 -0.06 0.27 0.2 -0.46 -1.11 -1.44 -1.48 -0.12 0 0.3 -0.06 0.02 -0.04 0.39 0.28 -0.03 -0.5 -0.44 -0.77 0.24 0.16 0.22 -0.46 -0.42 -0.21 0.09 0.42 0.21 0.04 -0.05 -0.24 -0.08 0.28 0.73 -0.12 -0.02 0.2 0 0.15 0.49 -0.02 -0.22 0.01 0.03 0.39 0.28 -0.08 -0.22 -0.05 0.11 0.38 0.11 0.41 -0.05 -0.12 -0.72 -0.08 0.41 0.33 0.42 0.43 0.52 0.19 -0.01 -0.07 0.07 0.43 0.73 0.12 0.48 1.08 0.55 0.59 0.28 0.64 0.45 0.17 0.08 0.18 0.07 -0.12 0.21 0.21 0.56 0.33 0.1 0.86 0.44 0.39 0.38 0.44 0.2 0.18 -0.21 -0.68 0.04 0.22 0.05 0.07 0.38 -0.12 -0.3 -0.51 -3.56 1.25 0.45 1.45 0.27 0.05 0.14 0.03 0 -0.99 3.83 At2g43030 265247_at
ribosomal protein L3 family protein 2


Ribosome



1.54 7.39
At1g73300 0.697
serine carboxypeptidase S10 family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At1g73300 257500_s_at (m)
serine carboxypeptidase S10 family protein 2






serine carboxy peptidase like, clade IA 2.04 3.40
At3g10840 0.697
hydrolase, alpha/beta fold family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At3g10840 257533_at
hydrolase, alpha/beta fold family protein 2




Lipid signaling

2.04 3.40
At3g48730 0.697
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) -0.81 NA 0.46 1.41 -0.06 -0.31 -0.1 0.03 -1.9 -0.92 -0.36 -0.12 -2.7 -0.31 -0.73 -1.11 -0.11 0.06 -0.68 -0.31 -0.75 -0.76 0.05 -0.1 -0.62 -0.23 0.31 0.08 0.04 -0.3 -0.45 0.15 0.51 -0.02 -0.39 0.48 0.46 0.42 0.24 0.36 0.65 0.45 0.44 -0.09 -1.02 0.25 0.26 -0.53 -0.49 -0.13 0.18 0.45 -0.09 0.17 -0.27 0.28 -0.87 0.41 -0.74 0.15 -0.76 0.46 -0.16 0.54 0.38 -0.06 -0.22 -0.24 0.15 0 0.21 0.38 0.24 0.38 0.21 0.14 0.39 -0.48 0.61 0.37 0.66 0.32 0.3 0.14 0.46 0.38 0.19 0.02 0.15 0.07 0.48 0.51 0.57 0.12 0.1 0.02 0.25 0.31 0.31 0.16 -0.02 0.32 0.4 0.49 -0.14 -1.3 -1.73 -2.06 0.51 0.15 0 -0.27 -0.39 -0.34 0.3 0.31 0 -0.87 -0.69 -0.79 0.31 0.23 -0.21 -0.74 -0.6 -0.38 -0.37 0.64 0.46 0.37 0.34 -0.12 0.17 0.15 0.2 0.48 0.27 0.36 0.13 0.26 0.59 -0.13 -0.61 0.05 -0.19 0.27 0.18 -0.09 -0.37 -0.46 -0.21 0.22 0.27 0.21 0.05 -0.24 -0.03 -0.43 0.28 0.38 0.49 0.51 0.54 0.21 -0.35 -0.14 0.07 0.08 -0.02 0.43 -0.21 -0.49 -0.55 0.45 -0.18 0.11 0.24 0.23 -0.01 -0.23 0.17 0.35 0.38 0.56 0.12 0.56 0.46 0.61 -0.01 0.09 -0.06 0.47 0.21 0.17 -0.12 -1.03 0.15 0.21 0.01 0.08 0.27 0.22 -0.45 -0.41 -2.39 1.21 0.3 1.32 -0.01 -0.03 0.38 0.28 -0.09 -0.73 1.55 At3g48730 252318_at
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) 6 porphyrin biosynthesis secondary metabolism | biogenesis of chloroplast chlorophyll biosynthesis | biosynthesis of proto- and siroheme | biotin biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | glutamate degradation I Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
1.44 4.25
At4g25080 0.697
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 1 0.32 0.39 0.13 -0.27 -0.87 -0.28 -0.43 -1.83 -1.24 -0.49 0.07 -2.83 -0.37 -0.84 -1.21 -0.37 0.06 -0.89 -0.48 -0.78 -1.22 0.04 -0.25 -0.56 -0.22 0.15 0.01 -0.01 -0.43 -0.48 -0.12 -0.08 0.12 -0.79 0.28 0.42 0.39 0.18 0.32 0.41 0.34 -0.16 -0.33 -1.67 0.15 0.3 -0.85 -0.46 -0.38 0.11 0.42 -0.25 0.27 -0.42 0.11 -1.17 0.2 -1.12 0.08 -1.02 0.42 -0.27 0.28 0.11 -0.18 -0.26 -0.07 0.25 0.36 0.96 0.37 0.27 0.68 0.76 0.71 0.41 -0.77 0.27 0.28 0.51 0.32 0.39 -0.09 0.14 0.26 0.65 0.44 0.36 0.43 0.65 0.47 0.52 0.42 0.15 -0.14 0.27 0.4 0.65 0.14 0.02 -0.16 0.28 0.15 -0.65 -1.21 -2.04 -3.03 0.01 0.15 0.2 -0.16 0.45 -0.16 0.4 0.44 0.04 -0.39 -0.53 -1.13 0.47 0.22 -0.18 -0.75 -0.15 -0.16 0.12 0.28 0.24 0.41 0.28 0.23 0.19 0.23 0.89 -0.15 0.13 0.45 0.03 0.23 0.12 -0.31 0.57 0.02 -1.44 0.46 0.42 0.15 0.33 0.13 -0.87 0.23 0.6 0.48 0.22 0.01 -0.88 -0.09 0.59 0.2 0.47 0.37 0.48 0.41 0.54 0.04 0.3 0.32 0.89 0.27 0.93 1.04 0.97 0.13 0.53 0.18 0.41 0.31 0.57 0.03 0.27 0.07 0.15 0.25 0.61 0.08 -0.01 0.56 0.56 0.51 0.4 0.3 0.05 0.13 -0.41 -0.9 -0.26 -0.23 -0.3 0.16 0.43 -0.26 -1.01 -1.24 -1.55 1.74 0.7 0.96 0.45 0.07 0.12 -0.6 0.11 -2.02 1.61 At4g25080 254105_at
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 9 magnesium protoporphyrin IX methyltransferase activity | chlorophyll biosynthesis secondary metabolism
Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.94 4.76
At3g13120 0.695
30S ribosomal protein S10, chloroplast, putative -0.39 0.21 0.35 0.28 0.05 -0.22 0 -0.06 -1.66 -0.95 -0.34 -0.02 -2.29 -0.18 -0.56 -1.12 -0.02 0.13 -0.76 -0.23 -0.56 -0.89 0.08 0.08 -0.56 -0.25 0.28 0.09 0.13 -0.34 -0.36 0.07 0.35 0.13 -0.13 0.49 0.55 0.54 0.37 0.3 0.56 0.45 0.13 -0.19 -1.3 0.4 0.19 -0.63 -0.27 -0.35 0.1 0.46 -0.02 0.39 -0.24 0.32 -0.74 0.23 -0.76 0.3 -0.74 0.46 -0.02 0.28 0.37 0.11 -0.07 0.01 0.01 0.13 0.04 0.24 0.04 0.26 0.46 0.16 0.26 -0.26 0.32 0.24 0.16 0.02 -0.08 -0.18 0.24 0.06 0.26 0.18 0.38 0.18 0.15 0.07 0.15 0.02 -0.27 0.16 0.3 0.03 0.38 0 0.31 0.09 0.15 0.16 -0.28 -0.99 -1.73 -1.97 0.11 -0.16 -0.02 0.09 0.34 0.03 0.28 0.41 0.08 -0.45 -0.65 -0.75 0.34 -0.2 -0.14 -0.35 -0.12 -0.2 0.02 0.54 0.15 0.04 -0.15 -0.04 -0.04 0.25 0.32 -0.04 -0.22 0.26 0.27 0.17 0.3 0.08 -0.28 0.02 -0.48 0.34 0.3 0.11 -0.11 -0.21 0.05 0.14 0.33 0.45 0.17 0.22 -0.48 -0.05 0.3 0.36 0.61 0.43 0.35 0.03 -0.12 -0.19 -0.07 0.37 0.01 0.22 0.02 0 0.22 0.27 0.14 0.07 0.07 0.09 -0.06 -0.6 -0.41 -0.04 0.44 0.23 0.26 0.23 -0.11 0.65 0.26 0.42 0.26 0.43 -0.15 0.01 -0.19 -0.76 -0.17 0.41 0.01 -0.03 0.31 -0.13 -0.12 -0.68 -1.6 1.33 0.37 1.42 0.18 0.1 0.53 0.02 0.39 -0.5 1.13 At3g13120 257190_at
30S ribosomal protein S10, chloroplast, putative 4


Ribosome



1.23 3.71
At1g12800 0.693
S1 RNA-binding domain-containing protein -0.68 0.2 0.41 0.7 0.02 -0.77 -0.31 -0.1 -1.37 -0.86 -0.3 -0.08 -1.79 -0.56 -0.64 -1 -0.14 -0.13 -0.64 -0.2 -0.89 -0.76 -0.03 -0.15 -0.54 -0.03 0.2 0.17 0.04 -0.13 -0.38 0.11 0.04 -0.02 -0.39 0.37 0.32 0.33 0.22 0.11 0.5 0.41 0.01 -0.13 -1.06 0.28 0.32 -0.63 -0.5 -0.36 -0.15 0.4 -0.01 0.26 -0.16 0.23 -0.81 0.3 -0.76 0.24 -0.62 0.39 0.09 0.31 0.28 -0.07 -0.15 -0.06 0.24 0.1 0.45 -0.02 0.22 0.25 0.22 0.06 -0.11 -0.6 0.37 0.18 0.32 0.03 0.14 -0.23 0.08 0.23 0.18 0.24 0.03 0.07 0.34 0.12 0.5 0.14 -0.02 -0.22 0.04 0.28 0.19 0.31 -0.07 -0.07 0.1 0.09 -0.13 -0.76 -0.61 -1.03 0.19 0.45 0.61 0.54 0.34 0.3 0.28 0.21 0.23 -0.14 -0.13 -0.66 0.22 0.39 0.28 0.21 -0.01 0.03 -0.16 0.39 0.31 0.13 0.25 -0.11 0.17 -0.13 0.59 0.06 0.19 0.17 0.39 0.34 0.16 -0.06 -0.57 -0.03 0 0.53 0.12 0.13 0.01 0.31 -0.42 0.16 0.34 0.22 0.14 0.14 -0.31 -0.15 0.67 0.03 0.71 0.36 0.09 -0.75 -0.28 -0.35 0.33 0.03 0.73 -0.05 0.01 -0.62 0.28 0.42 0.6 0.31 -0.19 -0.32 -0.4 -1.06 -0.26 -0.16 0.43 0.06 0.42 0.14 0.28 0.24 0.2 0.21 0 0.68 0.23 0.3 0.04 -0.74 0.06 -0.19 -0.15 0.3 -0.02 0.27 -0.83 -0.06 -2.1 0.37 0.15 1.29 0.31 0.28 0.33 -0.06 0.23 -0.81 0.7 At1g12800 261206_at
S1 RNA-binding domain-containing protein 2

Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV




1.34 3.39
At3g54050 0.691
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) -3.53 0.19 0.26 0.28 -0.14 -0.66 -0.36 -0.25 -1.86 -1.18 -0.27 0.02 -3.3 -0.36 -0.48 -1.64 -0.03 -0.14 -0.73 -0.25 -0.7 -1.01 0 -0.08 -0.53 -0.22 0.19 -0.14 0 -0.28 -0.53 -0.17 0.25 0.13 -0.36 0.19 0.28 0.36 0.22 0.3 0.28 0.09 -0.13 -0.16 -1.49 0.19 0.02 -0.67 -0.34 -0.47 0.19 0.39 -0.01 0.26 -0.19 0.14 -0.75 0.1 -0.72 0.08 -0.56 0.35 0.01 0.21 0.15 0.15 0.03 -0.44 -0.1 -0.06 0.73 0.26 0.24 0.26 0.97 0.42 0.91 -0.45 0.24 0.34 0.64 0.37 0.31 0.15 0.26 0.26 0.26 0.35 0.26 0.71 0.47 0.53 0.62 0.44 0.31 0.08 0.26 0.31 0.26 0.34 0.26 0.51 0.17 0.24 -0.04 -0.61 -1.73 -2.25 0.26 0.26 0.26 0.26 0.26 0.71 0.23 0.48 0.39 -0.11 -0.41 -0.7 0.49 0.26 0.26 0.26 0.26 0.24 0.19 0.43 0.4 0.48 0.36 0.08 0 0.26 0.5 0.26 0.45 0.26 0.26 0.26 0.26 0.08 -0.28 0.11 0.17 0.5 0.53 0.33 0.27 0.04 -0.26 0.78 0.64 0.63 0.26 0.26 0.26 -0.18 0.67 -0.5 0.92 0.51 0.44 0.1 0.39 -0.04 0.37 0.45 0.89 0.26 0.26 0.53 0.56 0.26 0.26 0.26 0.24 -0.03 -0.34 -0.98 -1.05 -0.95 -0.63 -0.18 0.51 0.3 0.26 0.63 0.36 0.19 0.7 0.26 0.08 0.23 -0.17 -0.94 -0.43 -0.2 0.01 0.21 0.19 -0.32 -1.02 -2.37 -6.51 1.44 0.36 3.46 0.5 0.14 0.26 -0.46 -0.23 -0.62 0.56 At3g54050 251885_at
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast gluconeogenesis | Calvin cycle Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism


1.71 9.97
At3g63410 0.691 APG1 Encodes a MPBQ/MSBQ methyltansferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosythesis. -0.24 0.19 0.11 0.77 -0.2 -0.55 -0.36 -0.39 -1.68 -0.97 -0.26 0.22 -2.43 -0.26 -0.49 -1.21 -0.05 -0.06 -0.74 -0.18 -0.46 -0.85 0.02 -0.05 -0.38 -0.19 0.2 0.07 0.01 -0.13 -0.35 -0.06 0.33 0.02 -0.33 0.21 0.2 0.23 0.19 0.09 0.25 0.23 0.14 -0.16 -1.1 0.2 0.09 -0.45 -0.36 -0.27 0.17 0.35 0.02 0.24 -0.18 0.13 -0.82 0.15 -0.75 0 -0.59 0.38 -0.05 0.37 -0.01 -0.03 -0.25 -0.14 -0.07 -0.03 0.52 0.33 0.31 0.15 0.43 0.22 0.34 -0.47 0.21 0.35 0.77 0.56 0.51 0.44 0.48 0.26 -0.05 0.02 0.15 0.09 0.25 0.42 0.56 0.46 0.32 0.06 0.42 0.55 0.37 0.3 -0.07 -0.12 0.14 0.16 -0.05 -0.7 -1.31 -1.59 0.07 0.14 -0.17 -0.21 -0.18 -0.1 0.15 0.25 0.11 -0.35 -0.3 -0.48 0.32 0.04 -0.77 -1.32 -0.67 -0.33 -0.07 0.66 0.42 0.41 0.42 0.12 0.09 0.08 0.32 0.57 0.61 0.37 -0.01 0.16 0.43 -0.01 -0.62 -0.06 0.16 0.49 0.37 0.28 0.38 0.04 -0.11 0.13 0.46 0.63 0.04 -0.23 -0.01 -0.4 0.47 0.35 0.75 0.45 0.55 0.01 0.16 0.04 0.17 0.38 0.66 0.37 0.28 -0.56 -0.49 0.57 0.47 0.69 -0.14 -0.14 -0.32 -0.99 -0.66 -0.52 -0.28 -0.04 0.13 0.51 0.56 0.42 0.18 0.22 -0.12 0.23 0.05 0 0.18 -0.64 -0.23 -0.18 -0.07 0.08 0.22 -0.04 -0.6 -0.79 -3.71 1.88 0.56 1.6 0.24 -0.08 0.2 -0.04 -0.14 -0.26 1.87 At3g63410 251118_at APG1 Encodes a MPBQ/MSBQ methyltansferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosythesis. 10 vitamin E biosynthesis | plastoquinone biosynthesis biogenesis of chloroplast vitamin E biosynthesis | plastoquinone biosynthesis
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Tocopherol biosynthesis | Plastoquinone biosynthesis


1.42 5.59
At4g24770 0.690 RBP31 encodes a chloroplast RNA-binding protein -0.75 0.04 0.15 0.53 0.07 -0.25 0.04 -0.03 -1.27 -0.78 -0.21 0.1 -2.17 -0.17 -0.6 -1.42 0.06 -0.06 -0.81 -0.09 -0.52 -1.05 -0.06 -0.03 -0.41 -0.39 0.19 -0.06 0.05 -0.28 -0.55 -0.14 0.13 -0.01 -0.17 0.34 0.36 0.3 0.18 0.18 0.49 0.38 -0.06 -0.28 -1.49 0.16 -0.26 -0.54 -0.65 -0.38 0.05 0.34 -0.07 0.24 -0.28 0.28 -0.73 0.26 -0.65 0.13 -0.68 0.27 -0.11 0.28 0.16 -0.06 -0.41 -0.03 0.34 -0.01 0.3 -0.14 -0.11 -0.02 0.48 0.37 0.22 -0.35 0.32 0.37 0.54 0.51 0.56 0.12 0.31 0.12 0.19 0.39 0.2 0.3 0.42 0.26 0.31 0.44 0.21 -0.32 0.31 0.14 0.23 0.47 0.08 -0.16 0.21 0.17 0.01 -0.48 -1.05 -1.78 0.22 -0.04 -0.1 0.11 -0.2 -0.41 0.21 0.22 0.11 -0.38 -0.39 -1.04 0.13 -0.07 -0.46 -0.65 -0.57 -0.67 -0.09 0.43 0.24 0.19 0.18 0.12 0.07 -0.06 0.73 0.31 0.3 0.16 0.19 0.01 0.24 -0.03 -0.7 0.23 -0.11 0.42 0.44 0.15 0.27 0.15 -0.19 -0.06 -0.05 0.2 -0.1 -0.06 -0.04 -0.26 0.35 0.52 0.49 0.46 0.24 -0.02 0.35 0.08 0.35 0.21 0.56 0.23 0.1 0.14 0.42 -0.03 0.16 0.32 0.17 -0.08 -0.53 -0.52 -0.27 -0.24 0.36 0.2 0.32 0.27 0.25 0.37 0.39 0.25 0.25 0.55 0.3 0.34 0.13 -0.2 0.13 -0.26 -0.07 0.1 0.38 0.05 -0.69 -0.39 -2.14 1.53 0.81 0.7 0.71 -0.05 0.41 -0.05 -0.23 -0.11 1.39 At4g24770 254126_at RBP31 encodes a chloroplast RNA-binding protein 10 RNA binding | RNA processing biogenesis of chloroplast

mRNA processing in chloroplast


1.28 3.69
At5g13510 0.690
ribosomal protein L10 family protein -0.48 0.13 0.06 0.64 0.26 -0.08 0.28 0.14 -1.46 -0.67 -0.16 0.11 -1.88 -0.23 -0.63 -1.03 0.03 -0.01 -0.47 -0.07 -0.59 -0.65 0.01 -0.12 -0.38 -0.03 0.26 0.02 0.05 -0.16 -0.38 -0.18 0.18 0.06 -0.3 0.38 0.37 0.41 0.22 0.17 0.37 0.32 0.06 -0.17 -1.11 0.03 0.35 -0.38 -0.42 -0.36 0.05 0.41 -0.08 0.23 -0.26 0.35 -0.89 0.31 -0.73 0.1 -0.7 0.25 -0.09 0.26 0.28 0.05 -0.17 -0.1 0.16 0.17 -0.12 -0.02 0.03 0.34 0.19 -0.08 0.17 -0.37 0.41 0.12 0.27 0.07 0.19 0.01 0.02 0.18 0.42 0.07 0.1 0.16 0.13 -0.05 0.24 -0.07 -0.08 -0.05 0.06 0.02 0.11 -0.04 -0.01 0.3 0.28 0.25 -0.41 -1.27 -1.49 -1.6 -0.16 -0.34 -0.01 -0.21 0.04 0.05 0.3 0.25 0.03 -0.53 -0.32 -0.56 -0.07 -0.38 -0.98 -1.39 -0.39 -0.32 0.02 0.54 0.18 0.04 0.12 -0.19 0.18 0.16 0.04 -0.15 -0.3 0.39 0.3 0.21 0.4 0.05 -0.63 0.3 0.09 0.47 0.48 0.19 -0.03 -0.04 -0.24 0.16 0.24 0.48 0.12 -0.16 -0.56 -0.12 0.53 0.18 0.64 0.51 0.25 0.08 0.09 0 0.21 0.43 0.4 0.09 0.09 0.52 0.57 0.38 0.44 0.31 -0.18 -0.06 0.24 0.19 0.11 0.08 0.57 0.08 0.32 0.27 0.05 0.49 0.17 0.17 0.27 0.42 0.17 0.08 0.04 -0.77 -0.08 0.08 -0.07 0.04 0.22 -0.04 0.05 -0.69 -2.46 1.48 0.73 1.68 0.44 -0.01 0.17 -0.01 0.07 -0.36 1.87 At5g13510 245852_at (m)
ribosomal protein L10 family protein 2
protein synthesis | ribosome biogenesis
Ribosome



1.32 4.33
At1g19150 0.689 LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) -3.91 0.36 0.43 0.43 -0.38 -0.95 -0.59 -0.4 -2.34 -1.76 -0.51 0.1 -4.54 -0.31 -0.96 -1.35 -0.23 -0.01 -1.08 -0.5 -0.74 -1.67 0.1 -0.16 -0.71 -0.4 0.25 -0.02 0.22 -0.54 -0.82 -0.04 -0.1 0.24 -1.06 0.33 0.51 0.56 0.23 0.35 0.56 0.19 -0.41 0.01 -2 0.48 -0.13 -0.93 -0.5 -0.62 0.2 0.76 0.18 0.46 -0.2 0.17 -0.96 0.31 -0.94 0.37 -0.86 0.87 0.01 -0.03 0.08 -0.2 -0.25 -0.26 -0.18 -0.18 0.43 0.43 0.43 0.43 0.43 0.43 0.43 -0.85 0.41 0.52 0.72 0.4 0.4 0.28 0.43 0.43 0.43 0.43 0.43 0.43 0.5 0.66 0.56 0.31 0.12 0.14 0.43 0.43 0.43 0.43 0.43 0.43 0.14 0.5 -0.03 -0.93 -2.16 -2.87 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.85 0.55 -0.03 -0.37 -0.77 0.43 0.43 0.43 0.43 0.43 0.43 0.44 0.46 0.56 0.89 0.62 0.39 0.09 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 -0.23 0.26 0.24 -1.52 0.9 0.88 0.56 0.42 -0.53 -1.7 0.43 0.43 0.43 0.43 0.43 0.43 0.22 1.04 0.43 0.67 0.88 1.01 0.42 0.35 0.36 0.44 0.55 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.23 0.27 0.36 -0.55 -1.65 -0.43 -0.14 -0.09 0.56 0.04 -0.31 -0.95 -4.79 -5.71 2.89 -1.81 1.27 0.41 0.17 0.43 -0.82 0.43 -2.34 0.43 At1g19150 256015_at LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) 10



Photosystems | Chlorophyll a/b binding proteins | light harvesting complex


2.45 8.60
At4g27600 0.688
pfkB-type carbohydrate kinase family protein -1.26 0.05 0 0.28 -0.24 -0.53 -0.22 -0.04 -0.72 -0.4 -0.53 -0.17 -1.36 -0.32 -0.77 -0.82 -0.41 0.12 -0.37 -0.53 -0.33 -0.37 -0.08 -0.1 -0.49 -0.18 0.06 -0.15 -0.03 -0.38 -0.34 0.02 -0.02 0 -0.27 0.23 0.27 0.22 0.07 0.26 0.19 0.14 -0.22 -0.28 -0.9 -0.06 -0.43 -0.64 -0.31 -0.31 -0.14 0.3 -0.04 0.14 -0.11 0.19 -0.53 0.13 -0.6 0.28 -0.49 0.26 0.06 0.18 0.11 -0.02 -0.24 0.09 0.01 -0.27 0.42 0.45 0.66 0.47 0.43 0.19 0.47 -0.81 -0.01 0.19 0.2 0.11 0.07 -0.47 0.01 0.74 -0.01 0.09 0.25 0.48 0.21 0.14 0.25 0.19 -0.1 -0.42 0.35 0.98 0.3 0.03 0.05 -0.06 0.01 0.08 -0.83 -1.17 -1.27 -1.5 0.15 0.55 0.07 0.13 0.62 0.41 0.04 0.27 -0.31 -0.15 -0.62 -1 0.21 0.77 0.48 0.46 0.56 0.45 0.01 0.55 0.07 0.31 -0.01 0 -0.07 -0.21 0.43 -0.05 0.6 0.15 -0.06 -0.05 0.3 -0.12 -0.34 0.11 -0.69 0.21 0.54 0.08 -0.05 -0.69 -1.44 -0.07 0.45 -0.18 -0.95 -0.7 -0.32 -0.32 0.52 0.46 0.24 0.31 0.13 -0.35 0.25 0.27 0.16 -0.23 0.19 0.34 0.86 0.46 0.73 0.28 0.41 0.48 0.56 0.56 0.56 0.82 0.86 0.45 0.11 0.37 0.62 0.47 0.76 0.45 0.37 0.3 0.46 0.31 0.02 0.19 0.09 -0.66 -0.16 -0.18 0.04 0.16 0.08 -0.01 -1.03 0.13 -3.16 1.09 0.59 1.13 0.16 0.12 -0.27 -0.01 0.43 -0.49 -0.2 At4g27600 253858_at
pfkB-type carbohydrate kinase family protein 2
C-compound and carbohydrate metabolism ribose degradation




1.48 4.30
At5g04140 0.688 GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. -4.76 0.38 0.25 0.25 0.05 -0.38 -0.53 -0.18 -1.53 -1.01 -0.17 -0.01 -2 -0.23 -0.67 -1.44 0.01 -0.13 -0.69 -0.04 -0.8 -0.77 -0.17 -0.2 -0.46 0.06 0 -0.17 -0.09 0.13 -0.25 -0.07 0.23 0.01 -0.46 0.3 0.35 0.27 0.22 0.15 -0.01 0 -0.09 -0.16 -1.04 0.3 -1.34 -0.67 -0.3 -0.43 0.1 0.46 -0.03 0.28 -0.28 0.09 -1.01 0.17 -0.71 -0.08 -0.64 0.25 0.04 0.31 -0.03 0.16 -0.13 -0.17 0.2 0.08 0.52 0.25 0.25 0.25 0.25 0.25 0.25 -0.52 0.01 0.26 0.59 0.46 0.37 0.3 0.25 0.25 0.25 0.25 0.25 0.25 0.36 0.5 0.63 0.56 0.37 0.05 0.25 0.25 0.25 0.25 0.25 0.25 0.21 0.24 -0.01 -0.03 -0.97 -1.63 0.25 0.25 0.25 0.25 0.25 0.25 0.15 0.44 0.38 -0.02 -0.34 -0.3 0.25 0.25 0.25 0.25 0.25 0.25 0.23 0.35 0.16 0.41 0.39 0.28 0.17 0.06 0.25 0.25 1.04 0.25 0.25 0.25 0.25 -0.36 -0.87 0.04 -0.54 0.4 0.32 0.41 0.67 -0.12 -0.62 0.25 0.25 0.25 0.25 0.25 0.25 -0.18 0.36 0.25 0.59 0.27 0.42 0.17 0.07 -0.18 0.19 0.34 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.28 0.25 0.09 0.02 0.15 0.01 -0.53 -0.54 -0.15 -0.16 0.3 0.37 0.25 -2.21 -1.2 -5.6 1.31 -0.14 3.99 0.68 -0.19 0.25 -0.63 0.25 -0.93 0.25 At5g04140 245701_at GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. 4 photorespiration amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur utilization
Nitrogen metabolism



1.48 9.59
At3g18680 0.687
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) -0.63 0.23 0.24 0.51 0.09 -0.1 0.2 -0.19 -1.29 -0.82 -0.61 0.08 -2.69 -0.62 -0.66 -0.84 -0.54 -0.06 -0.63 -0.43 -0.71 -0.46 -0.19 -0.04 -0.35 0.1 0.36 0.08 0.25 -0.05 0.03 0.3 0.43 0.02 -0.41 0.48 0.33 0.41 0.35 0.35 0.39 0.31 0.22 -0.19 -0.84 0.48 0.25 -0.83 -0.68 -0.04 0.03 0.31 -0.28 0.1 -0.56 0.15 -1.32 0.18 -1.28 0.05 -1.08 0.43 -0.38 0.43 0.45 0 -0.01 0.04 0.22 0.21 0.26 0.13 0.03 0.19 0.02 0.12 0.25 -0.7 0.62 0.2 0.63 -0.02 0 -0.06 0.25 -0.02 0.06 0.08 0.09 0.5 0.36 0.28 0.5 0.06 -0.4 -0.04 0.33 0.17 0.35 0.12 0.06 -0.08 0.57 0.49 -0.56 -1.79 -1.68 -1.37 0.37 0.02 0.13 -0.08 0.21 0.2 0.47 0.44 -0.03 -0.75 -0.41 -0.55 0.24 -0.07 0.1 0.04 -0.24 0.04 0.1 0.52 0.33 0.28 0.23 -0.15 -0.13 0.01 0.36 0.12 0.01 0.25 0.12 0.17 0.25 -0.12 -0.17 -0.05 0.02 0.64 0.64 -0.19 -1.06 -0.87 -0.55 0.15 0.19 0.23 -0.15 0.07 0.22 -0.46 0.84 0.27 0.91 0.66 0.45 -0.2 0.34 0.23 0.22 0.45 0.5 0.25 -0.18 0.09 0.06 0.17 0.33 0.38 0.09 0.08 0.08 0.17 -0.01 -0.25 0.51 0.3 0.31 0.28 -0.04 0.49 -0.12 -0.02 0.33 0.36 0.2 0.08 -0.45 -1.36 0.26 0.4 0.08 0.09 0.09 0.42 -0.59 0.32 -0.87 -0.81 -0.44 2.02 0.33 0.36 0.24 0.32 -0.09 -0.83 1.41 At3g18680 257756_at
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) 2

proline biosynthesis I | biosynthesis of pyrimidine ribonucleotides




1.39 4.71
At3g01440 0.686
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; -2.31 0.18 0.35 0.35 0.27 0.15 0.88 0.69 -2.02 -1.2 -0.28 -0.23 -3.56 -0.02 -1.36 -1.67 -0.32 -0.35 -1.04 -0.35 -1 -1.12 0.06 -0.22 -0.71 -0.31 0.09 0.17 0.11 -0.68 -0.81 0.12 0.24 0.08 -0.91 0.54 0.41 0.52 0.31 0.12 0.43 0.38 -0.2 0.09 -1.33 0.24 -0.72 -1 -0.71 -0.98 0.48 0.36 0.22 0.36 -0.04 0.18 -1.19 0.09 -0.88 0.35 -0.59 0.61 -0.09 0.31 0.25 -0.17 -0.28 0.05 -0.33 -0.27 0.35 0.35 0.7 0.35 -0.1 0.35 0.81 -1.41 0.1 0.32 0.3 0.27 0.11 -0.26 -0.1 0.7 0.35 0.35 -0.11 0.45 -0.33 0.28 0.22 0.35 -0.08 0.07 0.35 -0.27 0.35 0.21 0.35 0.81 -0.03 0.4 -1.1 -1.57 -2.49 -2.73 0.43 0.7 0.1 0.35 0.35 0.81 0.18 0.65 -0.22 -1.02 -0.95 -1.23 0.35 0.62 0.35 0.35 0.35 0.71 0.62 1.05 0.15 0.22 -0.48 0.2 -0.19 0.06 0.35 0.35 0.7 -0.09 0.35 0.35 0.81 -0.07 -1.79 0.36 -0.17 1.09 0.37 0.74 -0.18 -1.45 -0.98 0.35 0.7 0.35 0.35 0.35 0.81 -0.67 0.49 0.35 1.39 0.84 0.26 0.7 1.67 1.43 0.55 0.7 0.35 0.35 0.7 0.35 0.2 0.35 0.2 0.81 0.35 0.35 0.35 0.66 0.66 0.35 0.35 0.35 0.35 -0.32 0.7 0.35 0.35 -0.07 0.81 0.73 0.36 0.33 -0.14 -1.36 -0.53 -0.19 0.45 -0.3 -0.05 -0.35 -1.2 -3.9 -3.51 2.58 1.24 1.58 0.47 0.72 0.35 0.28 0.35 -2.66 0.35 At3g01440 258956_at
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; 4 oxygen evolving complex | photosynthesis, light reaction


Photosystems | Photosystem II | Oxygen-evolving enhancer protein


2.29 6.48
At1g60600 0.685
UbiA prenyltransferase family protein -0.19 0.04 0.37 1.05 0.02 -0.11 0.22 0.38 -1.66 -1.07 -0.36 -0.27 -1.85 -0.41 -0.56 -0.89 -0.22 0.11 -0.57 -0.26 -0.63 -0.95 0.07 -0.3 -0.48 0.06 0.35 -0.06 0.06 -0.53 -0.6 0.1 0.04 0.13 -0.46 0.43 0.48 0.42 0.25 0.39 0.6 0.46 0.28 -0.28 -0.76 0.31 0.26 -1.07 -0.57 -0.41 -0.19 0.38 -0.17 0.08 -0.5 0.09 -1.32 -0.02 -1.12 0.2 -1.04 0.32 -0.13 0.19 0.11 -0.22 -0.05 -0.1 0.12 -0.09 -0.08 0.44 0.32 0.27 -0.03 -0.19 0.43 -0.77 0.24 0.12 0.32 0.14 0.17 -0.26 0.09 0.38 0.02 -0.01 0.11 0.17 0.18 0.04 0.26 0.04 -0.1 -0.02 0.06 0.38 0.24 0.3 -0.01 0.35 0.2 0.13 -0.6 -1.35 -1.55 -1.86 0.8 0.43 0.08 0.36 0.57 0.32 0.28 0.24 0.02 -0.45 -0.52 -0.47 -0.03 0.21 -0.08 0.33 0.31 0.33 0.19 0.8 0.25 0.35 0.16 -0.02 0.1 0.12 -0.16 0.51 0.08 0.38 0.1 0.09 0.48 -0.63 -0.55 -0.05 -0.96 0.78 0.38 -0.13 -0.44 -0.81 -1.37 0.26 0.7 0.84 0.21 0.17 -0.04 -0.34 0.61 -0.09 0.83 0.64 0.11 -0.62 0.13 0.04 0.21 0.39 -0.11 0.43 0.48 0.21 0.7 0.52 0.27 0.68 0.24 0.24 0.24 0.14 0.17 0.24 -0.11 0.19 0.03 0.33 0.09 0.4 -0.26 -0.39 0.17 0.63 0.21 0.21 -0.26 -1.29 0.08 0.4 -0.11 -0.02 0.28 -0.33 0.07 -0.09 -1.13 0.95 0.97 0.84 0.46 0.17 0.7 0.57 0.14 -2.08 0.84 At1g60600 264963_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway Ubiquinone biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Phylloquinone biosynthesis
plastochinone and phylloquinone biosynthesis | phylloquinone biosynthesis
1.78 3.13
At2g39470 0.685
photosystem II reaction center PsbP family protein -3.12 0.24 0.31 0.54 -0.08 -0.41 -0.06 -0.09 -1.66 -1.47 -0.11 -0.02 -3.85 0.16 -0.37 -1.53 0.06 -0.03 -0.8 0 -0.68 -1.52 0.06 -0.05 -0.31 -0.06 0.22 -0.08 -0.04 -0.23 -0.38 -0.11 0 0.3 -0.48 0.39 0.38 0.41 0.26 0.38 0.28 0.22 -0.28 -0.05 -1.87 0.41 -0.51 -0.88 -0.74 -0.35 0.13 0.61 -0.03 0.44 -0.26 0.35 -0.85 0.41 -0.87 0.41 -0.76 0.69 -0.27 0.04 0.07 -0.2 -0.08 0.09 -0.12 0.27 0.1 0.42 0.31 0.18 0.28 0.02 0.25 -0.6 0.14 0.18 0.34 0.17 -0.01 -0.18 0.15 0.36 0.44 0 -0.07 -0.14 0.21 0.1 0.25 0.32 -0.12 0.03 0.03 0.19 0.01 0.46 -0.18 0.2 0.06 0.21 0.07 -0.6 -1.63 -2.49 0.61 0.7 0.75 0.5 0.49 0.26 0.45 0.49 0.44 -0.14 -0.73 -1.07 0.25 0.39 0.3 0.85 1.08 1.15 0.62 0.37 0.01 0.15 0 0.21 -0.13 0.15 0.27 0.44 0.92 0.5 0.44 0.05 -0.11 -0.43 0.1 0.21 -1 0.73 0.94 0.44 0.23 -0.59 -0.78 0.38 0.79 0.74 0.64 0.5 0.73 -0.37 0.43 0.54 0.85 0.35 0.22 -0.16 0.49 0.27 0.4 0.49 0.54 0.46 0.56 0.05 0.35 0.6 0.17 -0.16 0.31 0.31 0.31 0.31 0.21 0.31 0.31 0.46 0.44 0.27 0.3 -0.25 0.06 -0.04 0.16 0.51 0.28 0.28 -0.33 -1.28 -0.56 -0.1 0.02 0.16 0.15 -0.47 -0.65 -3.08 -5.24 2.76 0.92 1.26 0.35 0.84 0.33 -0.65 -0.15 -1.45 0.28 At2g39470 266979_at
photosystem II reaction center PsbP family protein 2



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


2.22 8.00
At5g45930 0.685 CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. 0.34 -1.58 0.34 0.34 -0.04 -0.94 -0.72 -0.97 -2.94 -2.13 -0.46 -0.03 -3.74 -0.18 -0.82 -1.44 0.19 -0.13 -1.02 -0.19 -1.24 -1.63 -0.17 -0.13 -0.98 -0.35 0.02 0.16 0.16 -0.59 -0.59 0.4 0 0.24 -0.49 0.51 0.52 0.65 0.22 0.38 0.64 0.33 -0.19 -0.26 -1.6 0.21 0.72 -0.93 -0.86 -0.7 0.3 0.52 0.31 0.49 -0.21 0.27 -0.5 0.28 -0.74 0.39 -0.59 0.51 0.23 0.44 0.5 -0.14 -0.06 0.06 0.05 0.45 0.34 0.34 0.34 0.34 0.34 0.34 0.34 -1.03 0.78 0.43 0.48 0.42 0.3 0.18 0.34 0.34 0.34 0.34 0.34 0.34 0.44 0.44 0.32 0.28 0.1 0.12 0.34 0.34 0.34 0.34 0.34 0.34 0.33 0.3 -0.27 -1.27 -1.83 -1.85 0.34 0.34 0.34 0.34 0.34 0.34 0.61 0.16 -0.1 -0.79 -0.71 -1.06 0.34 0.34 0.34 0.34 0.34 0.34 0.04 0.52 0.41 0.15 0.17 0.17 0.09 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.21 -1.33 0.23 0.31 0.65 0.37 -0.07 -0.08 -0.06 0.49 0.34 0.34 0.34 0.34 0.34 0.34 -0.56 0.56 0.34 0.86 0.6 0.18 -0.79 -0.25 0.1 0.35 0.47 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.72 0.27 0.14 -0.5 -1.09 0.07 0.48 -0.4 0.27 0.33 -0.3 -2.02 -1.23 -3.77 1.52 -1.69 1.73 -0.21 0.24 0.34 0.21 0.34 -0.99 0.8 At5g45930 248920_at (m) CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. 6 chlorophyll biosynthesis | magnesium chelatase complex
chlorophyll biosynthesis
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown


2.08 5.50
At2g36990 0.684 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -0.9 0.05 0.26 -0.28 -0.14 -0.42 -0.37 -0.46 -1.78 -1.03 -0.44 -0.18 -2.65 -0.03 -1.19 -1.05 -0.54 -0.09 -0.6 -0.49 -1.04 -0.74 0.15 -0.27 -0.56 -0.07 0.28 0.51 -0.07 -0.5 -0.42 0.03 0.15 -0.1 -0.9 0.4 0.39 0.34 0.18 0.31 0.37 0.53 -0.02 -0.26 -1.15 0.28 -0.26 -0.97 -0.17 -0.15 -0.02 0.33 0.13 0.14 -0.08 0.16 -1.14 0.3 -1.06 -0.01 -0.73 0.44 -0.01 0.71 0.01 -0.28 -0.22 0.26 0.33 0.26 0.17 0.2 -0.39 0.11 0.04 0.2 0.72 -1.18 0.22 0.25 0.22 0.19 0.26 0.07 0.13 -0.16 0.3 0.24 0.16 0.43 0.26 0.39 0.33 0.28 0.23 0 0.17 -0.02 0.12 0.36 0.25 0.53 0.24 0.44 -0.57 -0.59 -0.83 -1.07 0.47 0.02 0.03 0.41 0.83 0.02 0.28 0.28 -0.07 -0.23 -0.02 -0.31 0.53 0.21 -0.23 -0.23 0.21 0.22 -0.16 0.75 -0.06 0.22 -0.14 0.22 0.21 -0.08 0.35 0.24 -0.14 0.36 0.24 0.28 0.15 -0.42 -1.06 0.22 -0.16 0.15 0.22 0.21 0.17 -0.03 -0.35 0.56 0.28 0.63 0.5 0.35 0.28 -0.74 -0.05 0.26 0.64 -0.06 -0.1 0.23 0.35 0.3 0.18 0.14 0.19 0.37 -0.13 0.01 0.25 0.51 0.43 0.21 -0.05 0.17 0.15 0.08 0.33 -0.02 0.53 0.2 0.23 0.76 -0.06 0.85 0.25 0.53 0.61 0.71 0.2 0.3 -0.19 -0.69 0.1 0.05 -0.28 -0.08 0.28 0.16 -0.9 -0.05 -2 0 -0.88 1.48 0.95 0 0.26 0.71 -0.21 -1.51 1.35 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


1.72 4.12
At3g54210 0.684
ribosomal protein L17 family protein -0.82 0.11 0.1 0.83 -0.07 -0.68 -0.14 -0.19 -1.22 -0.56 -0.32 -0.05 -1.73 -0.1 -0.61 -0.79 0.06 0.04 -0.43 -0.06 -0.71 -0.61 -0.12 0.03 -0.37 -0.26 0.03 -0.07 -0.02 -0.14 -0.5 -0.17 0.23 0.05 -0.24 0.28 0.33 0.42 0.24 0.23 0.34 0.41 -0.05 -0.27 -1.26 0.12 0.09 -0.46 -0.43 -0.44 -0.06 0.36 -0.04 0.22 -0.19 0.09 -0.79 0.31 -0.63 0.11 -0.53 0.28 -0.06 0.31 0.14 -0.06 -0.27 -0.25 0.17 0.17 0.06 0.1 0.22 0.3 0.42 0.31 0.23 -0.18 0.24 0.22 0.24 -0.05 0.1 -0.06 -0.04 0.31 0.19 0.33 0.08 0.33 0.19 0.13 0.2 0.04 -0.05 -0.04 0.23 0.36 -0.1 0.27 0.19 0.01 0.07 0.09 0.01 -0.82 -1.12 -1.35 -0.12 -0.03 0.21 0.21 0.17 0.02 0.36 0.18 0.05 -0.42 -0.43 -0.75 0.16 0.17 -0.27 -0.8 -0.47 -0.26 -0.04 0.56 0.08 0 -0.03 -0.14 0.02 0.06 0.34 -0.13 0.17 0.18 0.22 0.05 0.26 -0.08 -0.26 0.14 -0.45 0.37 0.14 0 -0.22 -0.27 -0.21 0.33 0.27 0.09 -0.25 -0.44 -0.41 0.03 0.35 0.39 0.65 0.21 0.39 0.48 0.37 -0.15 0.09 0.31 0.63 0.15 0.6 0.88 0.8 0.31 0.6 0.56 0.01 0.02 0.03 0.18 -0.05 -0.23 0.14 -0.05 0.41 0.46 0.27 0.61 0.35 0.44 0.34 0.46 0.12 0.34 0.03 -0.59 -0.17 0 0.13 0.09 0.28 -0.31 -0.18 -0.62 -3.47 1.17 0.09 1.45 0.18 -0.08 -0.05 -0.08 -0.09 -0.33 1.71 At3g54210 251883_at
ribosomal protein L17 family protein 2
protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



1.34 5.17
At1g48520 0.682 GATB Encodes Glu-tRNA(Gln) amidotransferase subunit B -0.28 0.01 -0.08 0.17 0.04 -0.2 0.03 0.09 -0.86 -0.6 -0.23 0.46 -1.04 -0.32 -0.49 -0.97 -0.24 0.07 -0.55 -0.28 -0.27 -0.65 0.04 0.02 0.07 -0.11 0.19 -0.16 -0.09 0.06 -0.4 0.1 0.26 -0.01 -0.02 0.21 0.23 0.25 0.03 0.35 0.23 0.28 -0.12 0.11 -0.46 0.41 -0.14 -0.26 -0.31 -0.37 0.17 0.4 0.21 0.28 0.11 0.13 -0.35 0.26 -0.06 0.44 0.15 0.52 0.33 0.47 0.24 -0.09 -0.19 0.37 0.09 0.05 0.34 0 0.11 0.26 0.22 0.06 0.33 -0.21 0.2 0.16 0.07 0.18 -0.1 -0.16 0.01 0.12 0.24 0.11 0.22 0.02 -0.18 -0.1 0.07 -0.06 -0.14 -0.12 0.03 0.15 0.56 0.28 0.36 0.23 -0.02 -0.01 -0.38 -0.6 -1.29 -1.41 0.15 0.19 -0.06 -0.25 -0.25 -0.28 -0.06 -0.27 -0.04 -0.28 -0.54 -0.71 -0.01 0.12 -0.06 -0.47 -0.33 -0.46 0.05 0.47 -0.16 -0.18 -0.07 -0.01 -0.06 -0.18 0.15 -0.18 0.06 0.05 0.03 0.13 0.18 -0.09 -0.2 0.12 -0.61 0.38 0.31 -0.13 0.01 -0.19 -0.38 0.23 0.19 0.53 0.11 -0.06 -0.41 -0.25 0.26 -0.28 0.81 0.13 0.2 -0.36 0.02 0.13 0.24 0.33 0.31 0.19 0.17 0.07 0.28 0.27 0.53 0.52 -0.17 -0.51 -0.24 0.22 0.06 0.28 0.09 -0.3 0.43 0.12 0.26 0.56 0.2 0.35 0.3 0.57 -0.03 -0.28 -0.21 -0.4 0.15 0.1 -0.21 -0.01 0.3 -0.08 -0.45 -0.07 -1.85 0.86 0.3 1.95 0.19 0.27 0.07 0.14 -0.2 -0.96 0.89 At1g48520 261307_at GATB Encodes Glu-tRNA(Gln) amidotransferase subunit B 6


Other translation factors



1.09 3.80
At2g33800 0.682
ribosomal protein S5 family protein -0.76 0.11 0.25 0.34 -0.02 -0.34 -0.02 -0.14 -1.72 -1.2 -0.3 -0.14 -2.42 -0.25 -0.49 -1.1 -0.19 -0.04 -0.72 -0.31 -0.89 -0.83 -0.07 -0.06 -0.48 -0.42 0.08 -0.12 0.2 -0.25 -0.69 -0.14 0.21 0.06 -0.13 0.31 0.46 0.41 0.27 0.19 0.43 0.32 0.02 -0.4 -1.4 0.21 0.16 -0.62 -0.55 -0.37 0.06 0.39 -0.23 0.42 -0.24 0.25 -0.83 0.39 -0.56 0.28 -0.66 0.32 -0.09 0.44 0.33 0.06 -0.28 -0.09 0.12 0.12 0.32 -0.05 0.09 0.37 0.37 0.15 0.28 -0.36 0.41 0.22 0.23 0.05 0.04 -0.01 -0.06 0.07 0.28 0.21 -0.09 0.44 0.5 0.24 0.28 0.23 -0.02 0.01 0.02 0.09 0.37 0.12 -0.01 0.07 0.24 0.26 -0.11 -0.66 -0.99 -1.35 0.04 0.1 0.42 0.22 0.34 0.15 0.42 0.32 0.05 -0.41 -0.37 -0.77 0.21 0.12 -0.24 -0.49 -0.31 -0.28 0.02 0.51 0.21 0.12 0.05 -0.05 0.04 0.19 0.34 -0.05 0.12 0.4 0.1 0.03 0.26 -0.03 -0.1 -0.07 -0.24 0.42 0.13 -0.07 -0.28 -0.35 0.2 0.13 0.16 0.18 -0.17 -0.1 -0.35 0.02 0.13 0.22 0.6 0.26 0.37 0.44 0.37 -0.02 0.05 0.26 0.67 0.25 0.28 0.49 0.46 0.35 0.17 0.37 0.02 -0.1 -0.12 -0.17 -0.1 -0.41 0.31 0.53 0.3 0.19 0.09 0.62 0.26 0.28 0.35 0.48 0.27 0.35 0.01 -0.6 -0.04 0.19 0.07 0.08 0.3 -0.11 -0.43 -0.74 -2.67 1.75 0.41 0.68 0.21 0.43 0.11 -0.19 0.15 -0.34 1.6 At2g33800 267435_at
ribosomal protein S5 family protein 2


Ribosome



1.25 4.42
At4g30950 0.682 FAD6 omega-6 fatty acid desaturase; Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to sus -0.35 0.21 0.17 0.89 -0.03 -0.45 -0.15 -0.31 -0.83 -0.54 -0.17 -0.03 -1.02 -0.26 -0.53 -0.95 -0.04 -0.07 -0.57 -0.02 -0.67 -0.93 0.01 -0.14 -0.5 -0.33 0.03 0.17 -0.01 -0.26 -0.48 -0.02 0.25 0.03 -0.27 0.32 0.28 0.31 0.2 0.22 0.32 0.28 -0.04 -0.23 -1.34 0.23 0.35 -0.42 -0.44 -0.35 0.09 0.39 0.01 0.27 -0.19 0.19 -0.73 0.13 -0.67 0.03 -0.59 0.34 -0.04 0.37 0.19 0.19 -0.01 -0.07 0.11 0.11 0.48 -0.13 0.27 0.33 0.33 0.14 0.25 -0.37 0.24 0.34 0.34 0.07 0.16 -0.16 -0.18 0.19 0.27 0.05 0.16 0.23 0.28 0.19 0.46 0.17 0 -0.11 -0.06 0.24 0.26 0.01 -0.08 -0.1 0.16 0.13 0.04 -0.57 -0.56 -0.43 -0.32 -0.17 0.26 0.1 0.36 0.31 0.25 0.15 0.25 -0.37 -0.31 -0.37 0.1 0.08 -0.68 -1.22 -0.5 -0.14 0.14 0.55 0.11 0.2 0.08 0.01 0.05 0 0.73 -0.06 0.1 0.04 0.08 0.11 0.35 0.11 -0.5 0.07 0.03 0.28 0.28 0.37 0.38 0.31 -0.26 -0.06 0.04 0.06 -0.33 -0.09 -0.23 -0.23 0.42 0.22 0.56 0.22 0.24 -0.05 0.12 -0.2 0.13 0.16 0.64 0.02 0.25 -0.4 -0.6 -0.05 0.52 0.55 0.13 -0.04 -0.15 0.28 0.35 0.36 0.56 0.13 0.48 0.03 0.14 0.4 0.24 0.3 0.09 0.44 -0.12 0.19 0.26 -0.28 -0.12 -0.25 -0.03 0.03 0.35 0.09 -0.67 -0.69 -2.52 0.39 -0.77 2.42 0.36 0.09 0.51 -0.21 -0.26 -0.45 0.06 At4g30950 253547_at FAD6 omega-6 fatty acid desaturase; Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to sus 10 omega-6 fatty acid desaturase activity | photoinhibition | photoinhibition | fatty acid biosynthesis lipid, fatty acid and isoprenoid metabolism phospholipid desaturation pathway | glycosylglyceride desaturation pathway Androgen and estrogen metabolism | 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation | Benzoate degradation via hydroxylation Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.15 4.94
At3g52150 0.680
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) -1.53 0.19 0.4 1.06 -0.04 -0.54 -0.32 -0.19 -1.94 -1.07 -0.36 0.02 -2.31 -0.27 -0.86 -0.84 -0.08 -0.13 -0.69 -0.14 -0.83 -0.75 -0.01 -0.11 -0.59 -0.28 0.17 0.01 0.17 -0.27 -0.85 -0.03 0.24 0.11 -0.46 0.48 0.63 0.68 0.3 0.37 0.63 0.51 0.15 -0.2 -1.5 0.26 0.13 -0.65 -0.41 -0.41 0.23 0.48 -0.02 0.42 -0.23 0.28 -0.87 0.34 -0.82 0.12 -0.81 0.39 -0.05 0.35 0.28 0.02 -0.23 -0.16 0.13 -0.13 0.2 0.25 0.13 0.66 0.48 0.1 0.45 -0.3 0.36 0.28 0.28 -0.02 0.15 -0.2 0.16 0.56 0.49 0.45 0.09 0.45 -0.02 0.17 0.21 -0.14 -0.28 -0.2 0.18 0.48 0.35 0 -0.31 -0.21 0.22 0.28 -0.54 -1.48 -1.89 -2.14 -0.08 0.2 0.38 0.07 -0.08 0.33 0.09 0.09 0 -0.71 -0.72 -1.14 0 0.03 0.16 0.07 0.05 0.3 -0.03 0.48 0.08 -0.02 0 -0.28 0.04 -0.13 0.15 -0.22 0.31 0.51 0.55 0.2 0.55 0.07 -0.24 0.13 -0.42 0.59 0.07 0.18 -0.15 -0.08 -0.5 0.08 0.45 0.25 -0.08 -0.31 -0.5 -0.13 0.48 0.02 0.89 0.54 0.66 0.18 0.09 0.02 0.42 0.45 0.59 0.19 0.2 0.46 1.04 0.64 0.98 0.79 0.05 -0.21 -0.61 -1.17 -0.63 -0.65 0.08 -0.1 0.03 0.32 0.56 1.12 0.18 0.42 0.39 0.41 0.08 0.09 -0.18 -0.97 0.08 0.11 0.02 -0.01 0.33 -0.04 -0.53 -0.42 -2.5 1.56 1.5 1.24 0.42 -0.06 0.27 0.03 0.25 -0.92 2.97 At3g52150 252032_at
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) 4



mRNA processing in chloroplast


1.67 5.48
At5g35790 0.680
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 0.53 0.28 0.23 0.64 -0.21 -1.26 -0.8 -0.34 -1.9 -1.04 -0.46 -0.18 -1.68 -0.1 -1.2 -0.95 -0.16 0.11 -0.72 -0.75 -0.78 -1.12 0.44 -0.34 -0.43 -0.12 0.21 0.27 -0.05 -0.38 -0.62 -0.09 -0.26 -0.15 -0.89 0.38 0.39 0.5 0.09 0.27 0.44 0.37 -0.11 -0.38 -1.42 0.08 -0.44 -1.03 -0.24 0 0.43 0.61 0.07 0.09 -0.26 -0.38 -1.06 0.04 -1.06 -0.04 -0.9 0.52 -0.02 -0.12 -0.28 -0.55 0 0.17 0.04 0.09 0.69 0.55 0.32 0.67 0.61 -0.5 0.85 -0.86 0.05 0.03 0.48 0.35 0.22 -0.08 0.28 0.21 0.53 -0.15 0 0.49 0.53 0.66 0.5 0.41 0.09 0.03 0.53 0.35 0.54 0.08 0.14 0.53 0.28 0.37 -0.78 -0.66 -1.54 -2.1 0.41 -0.12 0.28 0.36 0.54 0.65 0.39 0.45 -0.02 -0.18 -0.74 -1.05 0.91 0.18 0.56 -0.06 0.59 1 -0.03 -0.12 -0.28 0.68 0.38 0.41 0.1 0.17 0.28 -0.02 -0.42 0.56 0.18 -0.34 0.32 -0.61 1.28 0 -2.31 0.2 1.39 0.01 0.08 -1.27 -2.73 0.72 0.74 0.78 0.14 -0.02 -0.3 0.47 0.91 0.7 0.2 0.26 1.17 -0.21 0.34 0.26 0.16 0 0.85 0.51 0.21 0.1 0.51 0.28 0.24 0.48 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.55 0.99 -0.1 1.2 0.34 0.14 0.57 -0.04 -0.19 0.32 -1.07 -1.12 -0.36 -0.04 -0.61 0.47 0.12 -0.15 -1.07 -1.34 -3.66 1.92 0.84 2.59 0.26 -0.1 0.23 -0.25 -0.09 -2.8 2.29 At5g35790 249694_at
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 10 glucose-6-phosphate 1-dehydrogenase activity | glucose metabolism | pentose-phosphate shunt, oxidative branch C-compound and carbohydrate metabolism | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway Pentose phosphate pathway | Glutathione metabolism Intermediary Carbon Metabolism


2.13 6.25
At1g17220 0.679
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -0.43 0.25 0.24 0.53 -0.36 -0.79 -0.68 -0.45 -1.43 -0.77 -0.57 -0.24 -1.79 -0.56 -1.12 -0.86 -0.34 0.08 -0.34 -0.41 -0.84 -0.7 0.01 -0.39 -0.45 -0.08 0.22 0.13 -0.11 -0.31 -0.31 0.26 0.14 0.06 -0.95 0.23 0.27 0.22 0.18 0.3 0.05 0.11 -0.04 -0.03 -1.17 0.14 -0.92 -0.61 -0.09 0.13 0.05 0.31 0.11 0.09 -0.12 -0.01 -1.01 0.01 -0.92 0.01 -0.78 0.12 -0.1 0.26 0.31 -0.06 -0.2 0.42 -0.09 0.5 0.13 0.07 -0.42 -0.02 0.35 -0.28 0.21 -0.8 0.28 0.21 0.1 0.04 -0.23 -0.39 0.33 0.04 0.05 0.24 0.28 0.56 0.15 -0.08 0.31 0.18 -0.22 0.07 0.64 0.04 0.34 -0.03 0.25 0.32 0.1 0.22 -0.24 -0.39 -0.9 -0.83 0.14 0.07 0.14 0.49 0.87 0.86 0.49 0.42 0.08 -0.13 -0.57 -0.8 0.62 0.28 0.01 0.11 0.01 0.28 -0.04 0.6 0.19 0.3 0.02 0.27 0.04 0.14 0.55 0.27 -0.22 0.18 0.42 0.32 0.15 -0.28 -0.72 0.2 0.28 0.22 0.65 0.45 0.55 -0.08 -0.3 0.4 0.08 0.5 0.39 0.36 0.16 -0.72 0.23 0.34 0.3 0.14 -0.14 -0.79 -0.3 0.18 0.16 0.2 0.41 0.09 -0.47 0.44 0.3 0.48 0.43 0.01 -0.14 0.48 -0.28 0.25 -0.38 0.22 0.95 0.52 0.46 0.84 0.63 0.78 0.47 0.18 0.64 0.56 0.4 0.31 0.32 -0.31 -0.15 0.22 -0.15 0.1 0.3 0.18 -1.65 -0.92 -3.76 0.62 0.19 3.11 0.09 0.17 0.28 0.37 -0.26 -2.25 0.94 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


1.54 6.87
At2g18710 0.679
preprotein translocase secY subunit, chloroplast (CpSecY) -1.08 0.24 0.31 0.18 -0.07 -0.52 -0.4 -0.39 -1.07 -0.89 -0.47 -0.02 -1.45 -0.35 -0.64 -1.4 -0.26 0.02 -0.51 -0.53 -0.55 -0.73 -0.08 -0.18 -0.63 -0.31 0.12 -0.15 -0.01 -0.42 -0.35 -0.14 0.05 0.1 -0.19 0.4 0.41 0.36 0.28 0.23 0.08 0.12 -0.44 -0.38 -1.1 -0.01 -0.19 -0.5 -0.45 -0.56 0.13 0.38 0.17 0.32 -0.09 0.24 -0.75 0.44 -0.75 0.3 -0.56 0.48 -0.16 0.25 -0.04 0.1 -0.13 -0.14 0.16 0.08 0.48 0.03 0.42 0.63 0.71 0.65 0.27 -0.48 -0.1 0.21 0.2 0.2 0.19 -0.41 -0.3 0.28 0.28 0.36 0.28 0.38 0.21 0.32 0.11 0.24 0.22 -0.21 0.04 0.28 0.49 0.24 0.22 0 -0.04 0.18 -0.59 -0.76 -0.64 -0.95 -0.25 0.08 0.22 0.38 0.57 0.21 -0.18 0.35 0.05 -0.35 -0.23 -0.81 0.1 0.15 0.44 0.31 0.36 -0.23 0.13 0.39 0.01 0.26 -0.1 0.14 0.04 0.03 0.4 -0.02 0.4 0.44 0.41 0.17 0.2 -0.04 0.3 -0.13 -0.73 0.2 0.56 -0.18 -0.03 -0.35 -0.61 -0.33 0.21 0.07 -0.07 0.07 -0.54 0.03 -0.2 -0.34 0.54 0.18 0.41 0.23 0.75 0.06 0.35 0.03 0.52 0.11 0.59 0.96 0.96 0.27 0.61 0.07 0.11 -0.02 0.2 0.26 0.06 -0.25 -0.11 0.21 0.32 0.07 0.42 0.64 0.24 0.45 0.19 0.37 -0.38 0.48 -0.22 -0.97 -0.2 -0.16 0.17 0.22 0.36 -0.04 -0.75 -0.48 -2.84 1.57 0.28 1.12 0.44 0.4 0.28 -0.09 -0.08 -0.5 0 At2g18710 266018_at
preprotein translocase secY subunit, chloroplast (CpSecY) 10


Folding, Sorting and Degradation | Protein export Pathway for nuclear-encoded, thylakoid-localized proteins | Sec (secretory) pathway


1.34 4.41
At4g17600 0.679 LIL3:1 lil3 protein -1.66 0.07 0.28 4.26 -0.56 -0.95 -0.46 -0.38 -1.62 -0.96 -0.53 0.07 -2.27 -0.27 -0.78 -1.03 -0.21 -0.02 -0.73 -0.46 -0.73 -0.94 -0.03 -0.18 -0.43 -0.22 0.19 -0.01 0.07 -0.12 -0.83 -0.03 0.25 0.05 -0.52 0.23 0.32 0.42 0.31 0.25 0.48 0.38 0.04 -0.2 -1.31 0.44 0.46 -0.72 -0.34 -0.47 0.07 0.46 -0.02 0.24 -0.32 -0.08 -1.09 0.11 -1 0.07 -0.69 0.32 -0.1 0.36 0.06 -0.16 -0.47 0.2 0.16 -0.26 0.1 0.28 0.25 0.04 0.47 -0.17 0.27 -0.66 0.28 0.19 0.15 0.21 -0.01 -0.23 0.22 0.39 0.08 0 0.06 -0.08 0.12 0.22 0.32 0.31 0.2 -0.07 0.69 0.47 0.44 0.56 0.1 0.47 0.13 0.26 -0.15 -0.81 -1.32 -2.02 0.48 0.26 0.1 0.45 0.08 0.63 0.16 0.33 0.13 -0.05 -0.15 -0.35 0.67 0.31 -0.68 -0.02 -0.57 -0.1 0.34 0.64 0.09 0.14 -0.1 0.26 0.33 0.04 0.17 0.41 0.64 0.25 0.3 0.05 0.28 -0.12 -0.23 0.09 -0.12 0.06 -0.18 0.15 0.13 -0.25 -0.67 0.5 0.95 0.06 0.21 -0.94 -0.89 -0.5 0.28 0.23 0.14 0.16 0.15 -0.7 -0.52 0.18 0.04 -0.32 0.45 0.38 0.46 -0.52 0.28 0.33 0.2 0.49 0.17 0.56 0.33 0.86 1.17 0.08 0.24 0.36 0.25 0.98 0.54 0.66 0.48 0.27 0.1 0.32 0.31 0.19 -0.08 -1.15 0.06 -0.07 -0.14 0.28 0.16 -0.09 -0.56 -0.57 -4.51 1.43 0.51 1.23 0.33 0.16 -0.38 0.21 0.18 -1.2 2.6 At4g17600 245354_at LIL3:1 lil3 protein 8 regulation of transcription


Photosystems | additional photosystem II components | Early light-inducible proteins


1.65 8.77
At1g11860 0.676
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala -0.63 -0.37 0.55 0.36 -0.06 -0.54 -0.36 -0.16 -1.79 -1.11 -0.14 0.01 -3.22 -0.11 -0.72 -1.65 0.11 0.15 -0.87 -0.11 -0.71 -1.17 -0.07 -0.14 -0.49 -0.22 0.1 -0.04 -0.05 -0.28 -0.57 -0.1 0.11 0.05 -0.33 0.26 0.34 0.36 0.14 0.14 0.23 0.22 -0.3 -0.19 -1.55 0.22 -0.07 -0.55 -0.26 -0.5 0.02 0.42 0.05 0.25 -0.14 0.2 -0.78 0.18 -0.8 0.26 -0.67 0.34 0.08 0.28 0.26 0.11 -0.1 -0.11 0.06 0.1 0.66 0.11 0 0.46 0.34 0.27 0.37 -0.53 0.35 0.4 0.74 0.5 0.36 0.2 0.43 0.1 0.4 0.2 0.13 0.33 0.51 0.4 0.59 0.65 0.21 0.12 0.28 0.1 0.51 0.24 -0.01 0.1 0.26 0.23 -0.13 -0.82 -1.68 -2.06 0.08 0.02 0.19 -0.01 -0.2 -0.13 0.46 0.45 0.3 -0.2 -0.43 -0.65 0.1 -0.06 -0.56 -1.47 -0.73 -0.63 0.27 0.73 0.46 0.35 0.38 0.19 0.15 0.22 0.56 0.28 0.21 0.5 0.23 0.31 0.68 -0.13 -0.74 0.35 -0.22 0.53 0.31 0.61 0.64 -0.22 -0.35 0.26 0.14 0.72 0.12 0.05 -0.31 -0.13 0.59 0.18 0.51 0.55 0.34 0.19 -0.31 0.24 0.07 0.15 0.47 0.15 0.13 0.04 0.3 0.39 -0.1 0.31 0.28 0.08 -0.06 -0.69 -0.47 -0.39 0.42 0.31 0.56 0.24 0.22 0.74 0.53 0.37 0.59 0.53 0.36 0.32 0.14 -0.48 -0.21 -0.14 0.16 -0.1 0.04 -0.18 -1.14 -1.55 -1.01 0.72 -0.22 1.13 0.43 0.18 0.39 -0.27 0.41 -1.03 1.68 At1g11860 264394_at
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala 2

glycine degradation I Nitrogen metabolism | Glycine, serine and threonine metabolism | One carbon pool by folate



1.67 4.90
At1g32990 0.675 PRPL11 mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11 -1.21 0.23 0.18 0.66 0.24 -0.38 0 0.02 -1.69 -1.11 0.06 0.27 -2.69 0.03 -0.32 -1.11 0.06 0.07 -0.87 0.04 -0.52 -0.94 0.1 0.12 -0.37 -0.25 0.23 0.05 0.15 -0.13 -0.47 -0.07 0.45 0.15 0.01 0.54 0.53 0.49 0.26 0.27 0.57 0.3 -0.15 -0.25 -1.51 0.49 0.31 -0.66 -0.44 -0.38 0.3 0.41 -0.05 0.43 -0.13 0.35 -0.53 0.35 -0.62 0.19 -0.55 0.45 0.11 0.37 0.44 0.18 -0.13 -0.18 0.19 -0.23 0.11 0.21 0.19 0.25 -0.02 0.16 0.21 -0.17 0.52 0.3 0.31 -0.05 0.09 -0.25 0.11 0.14 0.23 -0.03 0.48 0.13 0.15 0.05 0.23 -0.03 -0.22 -0.04 0.01 -0.03 0.36 -0.28 -0.05 -0.42 0.28 0.36 -0.08 -1.02 -1.59 -1.86 0.25 -0.18 0.07 -0.39 -0.25 -0.53 0.32 0.38 0.17 -0.38 -0.41 -0.69 0.15 -0.09 -0.09 -0.62 -0.28 -0.28 0.04 0.42 0.13 0.18 -0.05 -0.26 0.02 0.2 0.15 -0.02 -0.04 0.39 0.04 0.4 0.3 0.16 -0.09 0.13 -0.3 0.42 -0.11 0.1 -0.28 -0.01 0.07 0.33 0.23 0.45 -0.1 -0.07 -0.66 0.27 0.59 0.34 0.62 0.56 0.52 0.37 0.02 -0.11 0.17 0.24 0.18 0.28 0.09 -0.02 0.52 0.3 0.07 0.34 0.13 0.23 -0.39 -1.06 -0.67 -0.02 0.41 0.6 0.11 0.06 -0.05 0.69 -0.28 0.28 0 0.42 0.07 0.07 -0.11 -0.96 0.09 0.14 -0.25 0.04 0.45 0.15 -1.02 -0.34 -3.39 2.29 0.59 1.31 0.55 0.24 0.49 0.17 0.16 -0.19 2.8 At1g32990 261190_at PRPL11 mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11 6


Ribosome



1.57 6.19
At3g07670 0.675
SET domain-containing protein, similar to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I (Spinacia oleracea) -0.73 -0.15 0.36 1.21 -0.01 -0.78 -0.46 -0.41 -1.63 -0.71 -0.18 -0.09 -2.16 -0.32 -1.06 -0.97 -0.06 -0.13 -0.4 -0.53 -0.54 -0.62 0.04 -0.15 -0.01 0.22 0.2 0.09 -0.09 0.05 -0.04 0.28 0.25 0.1 -0.13 0.19 0.26 0.34 0.23 0.27 0.26 0 0.03 -0.22 -0.89 0.14 -0.44 -0.8 -0.28 0.09 -0.17 0.21 0.24 -0.05 -0.07 -0.22 -0.75 -0.11 -0.98 -0.07 -0.62 0.44 -0.08 0.3 -0.06 -0.03 -0.21 0.15 0.02 0.06 0.53 0.14 0.69 0.6 0.23 0.28 0.53 -0.54 0.2 0.37 0.35 0.09 0.09 -0.38 0.34 0.42 0.3 -0.41 0.2 0.46 0.12 0.15 0.22 0.21 -0.02 -0.1 0.04 0.43 0.35 0.05 0.07 0.46 0.24 0.22 -0.06 -0.48 -0.68 -0.79 0.18 0.39 0.05 -0.01 0.27 0.63 0.23 0.3 0.05 -0.48 -0.42 -0.69 0.25 0.36 0.05 -0.69 0.07 0.3 0.3 0.44 0.19 0.25 0.22 0.13 -0.18 -0.08 0.19 -0.28 0.28 0.19 0.25 0.12 0.21 -0.19 -1.31 0.44 0.35 0.28 0.35 0.13 0.05 -0.53 -0.27 0.31 0.47 0.41 -0.27 -0.14 -0.2 -0.33 0.75 0.14 0.56 0.4 0.13 -0.78 -0.11 0.24 0.36 0.03 0.42 0.32 0.31 -0.18 0.13 0.62 0.45 0.53 -0.19 -0.14 -0.93 -1.28 -0.45 0.02 0.05 0.26 0.28 0.4 0.37 0.64 0.09 0.28 0.43 0.47 0.25 0.01 0.06 -0.53 0.06 -0.02 -0.01 0.08 -0.02 0.18 -0.03 -0.3 -3.42 0.7 -0.2 2.42 0.28 0.19 0.24 0.09 0.08 -0.48 0.56 At3g07670 259258_at
SET domain-containing protein, similar to ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I (Spinacia oleracea) 4



Intermediary Carbon Metabolism


1.33 5.84
At3g18890 0.675
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) -1.27 0.16 0.35 0.72 0.67 0.12 0.61 0.14 -2 -0.93 -0.1 -0.14 -3.7 -0.36 -0.21 -1.65 0.03 -0.3 -0.88 -0.1 -0.43 -1.34 -0.24 -0.12 -0.42 -0.1 0.21 0.15 0.09 -0.11 -0.25 -0.16 0.23 0 -0.37 0.38 0.33 0.47 0.26 0.3 0.56 0.54 0.27 0.01 -1.4 -0.06 0.19 -0.61 -0.84 -0.28 0.14 0.6 -0.04 0.38 -0.39 0.44 -0.68 0.42 -0.56 0.48 -0.5 0.55 0.07 0.39 0.23 0.28 -0.08 -0.34 -0.04 0.24 0.35 0.35 0.08 -0.19 0.35 0.67 0.44 -0.63 0.16 0.55 0.21 0.02 0.12 -0.02 0.35 0.05 0.35 0.02 0.41 -0.02 0.03 0.12 0.13 -0.12 -0.19 -0.2 -0.22 0.23 -0.25 0.41 0.28 0.09 -0.08 0.18 -0.72 -2.17 -2.7 -3.27 0.21 0.35 0.35 0.35 0.67 0.44 0.03 0.56 0.02 -0.3 -0.66 -1.48 0.35 -0.11 0.35 0.35 0.38 0.52 -0.02 0.71 -0.05 0.24 0 -0.95 -0.26 -0.1 0.11 -0.12 0.14 -0.07 0.21 0.67 0.32 -0.04 0.11 0.23 -0.43 0.57 0.57 0.16 -0.16 -0.2 -0.4 0.35 0.35 0.35 0.39 0.43 0.44 0.28 1.22 0.96 1.08 0.64 0.59 0.04 0.2 -0.65 0.27 0.35 0.11 0 0.35 0.35 0.51 0.34 0.67 0.44 0.46 0.31 0.46 0.03 -0.11 0.35 0.35 0.4 0.55 -0.31 -0.44 0.18 -0.15 0.4 0.44 0.18 -0.07 0.27 -0.49 -1.14 -0.19 -0.21 0.43 0.4 0 0.04 -0.13 -1.99 -2.29 -0.35 -1.14 3.2 0.62 -0.1 0.35 -0.28 0.09 -0.94 2.02 At3g18890 256655_at
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) 4



Chloroplastic protein import via envelope membrane | Tic apparatus


1.96 6.90
At3g44890 0.670 RPL9 50S ribosomal protein L9, chloroplast (CL9) -0.38 -0.02 0.33 0.16 0.03 0.17 0.46 0.42 -1.67 -1.26 -0.09 -0.05 -2.75 -0.19 -0.45 -1.13 0.12 -0.24 -1.12 0.07 -0.95 -1.32 -0.15 -0.31 -0.76 -0.39 0.3 -0.11 -0.13 -0.45 -0.92 0.1 0.3 0.08 -0.38 0.37 0.42 0.51 0.13 0.13 0.57 0.44 0.05 -0.28 -1.45 0.23 0.36 -0.55 -0.85 -0.67 0.18 0.31 -0.19 0.21 -0.4 0.24 -0.69 0.39 -0.45 0.21 -0.6 0.27 -0.02 0.55 0.33 -0.04 -0.2 -0.19 -0.11 -0.06 0.61 0.3 0.36 0.28 0.21 0.04 0.49 -0.17 0.55 0.15 0.63 0.47 0.42 0.32 0.39 0.03 0.3 0.18 0.28 0.34 0.24 0.3 0.39 0.14 -0.04 -0.11 0.31 0.45 0.59 0.34 0.11 0.16 0.09 0.26 -0.17 -1.34 -1.89 -2.46 -0.09 -0.17 0.06 0.05 -0.12 -0.25 0.15 0.28 0.09 -0.66 -0.56 -0.74 0.3 0.19 -0.4 -0.63 -0.48 0.03 -0.06 0.53 0.42 0.24 0.2 -0.11 -0.05 0.06 0.23 0.26 0.32 0.11 0.21 0.34 0.56 0.06 -0.73 0.22 0 0.56 0.33 0.14 0.03 -0.2 0.1 0.03 0.11 0.59 0.21 -0.08 0 -0.08 0.53 -0.17 0.74 0.63 0.4 0.24 -0.07 -0.02 0.06 0.44 0.79 0.31 0.14 -0.25 0.04 0.56 0.35 0.5 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.18 0.43 0.24 0.71 0.34 0.12 0.35 0.51 0.06 0.17 -0.06 -0.8 -0.26 0.05 -0.02 0.1 0.39 -0.16 -0.1 -0.4 -1.49 0.24 -1.02 0.82 0.07 -0.02 0.28 -0.14 -0.56 -0.67 1.95 At3g44890 246339_at RPL9 50S ribosomal protein L9, chloroplast (CL9) 6 protein biosynthesis | plastid large ribosomal subunit protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



1.62 4.70
At5g13730 0.670 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -3.03 0.33 0.35 0.35 -0.43 -0.75 -0.28 -0.36 -2.06 -1.46 -0.01 -0.27 -2.2 0.26 -1.03 -1.43 0.04 -0.14 -0.63 -0.38 -1.02 -1.06 0.16 -0.23 -0.52 -0.17 0.33 0.05 -0.12 -0.32 -0.56 0.04 0.42 0.49 -0.75 0.48 0.55 0.5 0.37 0.44 0.51 0.28 -0.25 0.17 -1.19 0.12 -1.45 -0.94 -0.34 -0.33 -0.4 0.46 0.36 0.2 0.09 -0.09 -0.79 0.05 -0.78 -0.31 -0.44 0.54 0.23 -0.38 -0.28 -0.67 0 0.4 0.06 0.44 0.32 0.35 0.35 0.35 0.38 0.35 0.35 -0.96 0.08 0.36 0.26 0.34 -0.12 -0.23 0.35 0.35 0.35 0 0.35 0.35 0.57 0.72 0.28 0.65 0.21 0.21 0.3 0.35 0.35 0.35 0.35 0.35 0.56 0.75 -0.25 0.33 -1.26 -0.72 0.35 0.35 0.35 0.22 0.35 0.66 0.72 0.68 0.45 0.23 -0.22 0.2 0.35 0.35 0.35 0.44 0.49 0.39 0.38 0.1 -0.02 0.38 0.17 0.49 -0.13 0.19 0.35 0.35 0.35 0.35 0.35 0.35 0.35 -1.55 -0.32 -0.07 -0.35 0.53 0.97 -0.09 -1.02 -2.58 -2.14 0.35 0.35 0.35 0.35 0.35 0.35 -0.84 0.07 0.35 0.28 0.14 0.05 -0.37 0.89 0.97 0.31 0.32 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.37 0.35 0.22 0.35 0.35 0.35 0.22 0.46 0.04 -1.33 -1.32 -0.38 0.2 0.57 0.53 0.26 0.13 -1.05 -2.49 -3.06 0.09 -1.01 2.87 0.77 0.93 0.35 -0.09 0.35 -2.66 0.35 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


2.09 5.92










































































































































































































































page created by Juergen Ehlting 05/22/06