Co-Expression Analysis of:			CYP89A5 (At1g64950)	Institut de Biologie Moléculaire des Plantes																																																																																																																																																																										_____________________________________________		____________________________________	____________________________________	____________________________________	____________________________________	____________________________________	____________________________________	____________________________________	____________________________________
________________________			_____________________________________________	CYPedia Home
Organ and Tissue Data Set			view / save heatmap as:		OpenOffice table			annotation details for co-expressed genes can be found to the right of the heatmap
					MS Excel table
			save / view all data as:		Tab delimited Table			For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.
shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only)			magnitude of change [log2(sample / average)]	0	0.3	0.6	0.9	1.2	1.5	1.8	2.1	2.4	2.7	>2.99
			greater than zero
			less than zero
Locus	r-value	Name	Description	suspension cell, aphidicolin, 0h ( 5)	suspension cell, aphidicolin, 2h (5)	suspension cell, aphidicolin, 4h (5)	suspension cell, aphidicolin, 6h (5)	suspension cell, aphidicolin, 8h (5)	suspension cell, aphidicolin, 10h (5)	suspension cell, aphidicolin, 12h (5)	suspension cell, aphidicolin, 14h (5)	suspension cell, aphidicolin, 16h (5)	suspension cell, aphidicolin, 19h (5)	suspension cell, sucrose, 0h (6)	suspension cell, sucrose, 2h (6)	suspension cell, sucrose, 4h (6)	suspension cell, sucrose, 6h (6)	suspension cell, sucrose, 8h (6)	suspension cell, sucrose, 10h (6)	suspension cell, sucrose, 12h (6)	suspension cell, 1d (19)	suspension cell, 1d (19)	suspension cell, 5d (19)	suspension cell, 7d (19)	suspension cell, senescing (20)	protoplast (62)	suspension cell, light (153)	suspension cell, dark (153)	callus, transdifferentiation A1 (78)	callus, transdifferentiation A2 (78)	callus, transdifferentiation A3 (78)	callus, transdifferentiation A4 (78)	callus, transdifferentiation A5 (78)	callus, transdifferentiation A6 (78)	seedling (59)	seedling (137)	seedling (138)	seedling (143)	seedling (144)	seedling, cont. light, 26h (149)	seedling, cont. light, 26h (149)	seedling, cont. light, 34h (149)	seedling, cont. light, 38h (149)	seedling, cont. light, 42h (149)	seedling, cont. light, 46h (149)	seedling, cont. light, 50h (149)	seedling, cont. light, 54h (149)	seedling, cont. light, 58h (149)	seedling, cont. light, 62h (149)	seedling, cont. light, 66h (149)	seedling, cont. light, 70h (149)	seedling, cont. light, 74h (149)	seedling, far red then white light (83)	seedling, dark then white light (83)	Cotyledon (87)	Hypocotyl (87)	Hypocotyl (139)	leaf, dedifferentiation A01 (50)	leaf, dedifferentiation A02 (50)	leaf, dedifferentiation A81 (50)	leaf, dedifferentiation A82 (50)	leaf, dedifferentiation A301 (50)	leaf, dedifferentiation A302 (50)	leaf, dedifferentiation A481 (50)	leaf, dedifferentiation A482 (50)	leaf, dedifferentiation B01 (50)	leaf, dedifferentiation B02 (50)	leaf, whole rosette, 0h (56)	leaf, whole rosette, 0h (56)	leaf, whole rosette, 2h (56)	leaf, whole rosette, 4h (56)	leaf, whole rosette, 8h (56)	leaf, whole rosette, 12h (56)	leaf, whole rosette, 13h (56)	leaf, whole rosette, 14h (56)	leaf, whole rosette, 16h (56)	leaf, whole rosette, 20h (56)	leaf, whole rosette, 24h (56)	leaf, whole rosette, 0h (56)	leaf, whole rosette, 4h (56)	leaf, whole rosette, 8h (56)	leaf, whole rosette, 12h (56)	leaf, whole rosette, 16h (56)	leaf, whole rosette, 20h (56)	leaf, mature, high light (68)	leaf, mature, low light (68)	leaf stage 7, petiol (88)	leaf stage 7, proximal half (88)	leaf stage 7, distal half (88)	guard cell enriched (11)	senescing leaf, Col5 (60)	senescing leaf, Col0 (60)	senescing leaf (88)	cauline leaf (88)	roots (87)	whole roots, A. halleri (101)	whole roots, A. petrea (101)	roots (141)	mature roots (23)	lateral roots (24)	lateral roots (29)	roots, axillary buds, dormant (30)	roots, axillary buds, active (30)	Roots, N03 depleted, dex treated (64)	Roots, N03 depleted (64)	root elongation zone (79)	stem (80)	stem (88)	stem, base (66)	stem, tip (66)	stem, 1st node (88)	stem, base, injured with needle (8)	shoot apex (87)	shoot apex (87)	shoot apex (88)	apical region, vegetative, Col (94)	apical region, reproductive, 3d, Col (94)	apical region, reproductive, 5d, Col (94)	apical region, reproductive, 7d, Col (94)	apical region, vegetative, Ler (94)	apical region, reproductive, 3d, Ler (94)	apical region, reproductive, 5d, Ler (94)	apical region, reproductive, 7d, Ler (94)	flower, stage 9 (89)	flower, stage 10 (89)	flower, stage 12 (89)	flower, stage 15 (89)	flower-silique, stage I (84)	flower-silique, stage II (84)	flower-silique, stage III (84)	flower bud, young (9)	flower bud, old (9)	flower (80)	flower (92)	flower (100)	sepal, stage 12 (89)	sepal, stage 15 (89)	petal, stage 12 (89)	petal, stage 15 (89)	stamen, stage 12 (89)	stamen, stage 15 (89)	carpel, stage 12 (89)	carpel, stage 15 (89)	pedicel, stage 15 (89)	pollen, uninucleate microspores (22)	pollen, bicellular (22)	pollen, tricellular (22)	pollen, mature (22)	pollen (74)	silique, young (136)	silique, old (136)	silique, stage 3 (90)	silique, stage 4 (90)	silique, stage 5 (90)	seed, stage 6 (90)	seed, stage 7 (90)	seed, stage 8 (90)	seed, stage 9 (90)	seed, stage 10 (90)	seed, dry (116)	seed, dry (117)	seed, fresh (96)	seed, dormant (96)	seed, imbibed, 1h (117)	seed, imbibed, 3h (117)	seed, imbibed, 22°C (118)	seed, imbibed, far red, 22°C (132)	seed, imbibed, 4°C (118)	seed, imbibed, far red, 4°C (132)	seed, imbibed (116)	Locus	Probeset	Name	Description	Annotation score	GO.keywords	FunCat keywords	AraCyc annotations	KEGG annotations	BioPath annotations	AcylLipid category	Literature annotations	Gene family	90% quantile of DE	max. DE
At1g64950	1.000	CYP89A5	cytochrome P450 family protein	-0.91	-0.91	-0.91	1.25	-0.91	-0.91	-0.91	1.43	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	2.06	-0.91	1.21	-0.18	0.55	0.67	1.32	0.85	0.73	0.79	1.09	-0.91	-0.18	0.66	-0.91	0.6	0.6	1.14	0.91	1.31	-0.91	1.26	1.12	1.09	1.52	0.69	1	0.51	0.73	-0.79	-0.91	-1.7	-0.8	-0.21	1.74	-0.17	-0.39	0.9	-0.16	1.11	0.05	0.67	-0.01	-0.68	0.07	0.54	-0.3	1.29	1.15	0.86	0.86	1.62	-0.13	0.56	0.47	1.01	-0.15	-0.21	0.67	0.09	-0.6	0.38	0.57	-0.3	0.42	0.11	2.68	1.58	-1.2	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	-1.39	-0.91	1.87	1.15	-0.91	-0.91	-0.4	-0.91	-0.91	-1.32	-0.26	-1.14	-1.06	-0.74	-2.25	-0.91	-1.39	-1.13	-0.91	-0.91	-0.91	-0.91	0.2	0.39	0.51	1.22	-0.91	-0.91	-0.91	-0.91	-0.91	-0.91	0.16	-0.91	2.57	3.01	-0.79	1.27	0.38	1.19	-0.47	-0.14	-0.02	-0.91	-0.91	-0.91	-0.91	-0.91	0.97	1.92	0.03	0.66	0.22	-0.48	-0.45	1.74	1.66	2.1	1.62	2.25	-0.91	-0.91	2.75	2.71	-0.91	-0.91	-1	-0.91	-0.52	At1g64950	266155_at	CYP89A5	cytochrome P450 family protein	1								cytochrome P450 family	2.95	5.26
At5g17380	0.662		pyruvate decarboxylase family protein, similar to 2-hydroxyphytanoyl-CoA lyase (Homo sapiens)	-0.49	-0.91	-0.33	-0.28	-0.52	-0.53	-0.33	-0.6	-0.5	-0.57	-0.36	-0.36	-0.68	-0.69	-1.12	-1.12	-1.1	-0.95	-0.88	-1.15	-0.84	0.86	0.09	0.91	0.08	0.6	-0.31	0.31	-0.3	0.31	-0.42	0.81	0.54	0.15	0.04	0.13	0.52	0.04	0.04	-0.05	0.49	0.28	0.35	0.04	0.41	0.4	0.16	0.37	0.56	1.02	0.66	0.08	-0.46	0.08	-0.89	-0.75	0.95	1.65	-0.73	-0.66	1.91	2.1	2.2	1.78	-0.11	-0.32	0.06	0.09	-0.06	-0.21	0.09	0.19	-0.09	-0.08	-0.2	-0.09	-0.28	-0.56	-0.4	-0.57	-0.59	0.17	-0.13	-0.31	0.01	0.03	-0.44	-0.12	-0.01	0.83	0.43	0.06	-0.25	0.17	0.46	0.24	-0.41	1.08	-1.17	-1.41	1.57	1.42	1.23	-0.56	0.55	-0.3	-0.42	-0.08	-0.35	-0.83	-1	-1.09	-1.47	-1.63	-1.17	-1.65	-1.1	-0.84	-0.95	-0.99	-0.63	-0.56	0.09	0.8	-0.41	0.09	-0.5	-0.4	-0.25	-1.08	-0.73	-0.69	1.19	2.13	0.24	1.23	1.34	1.45	-0.69	-0.3	-0.26	-1.26	-0.35	0.28	-0.05	-0.65	-0.12	1.31	-0.68	-0.05	-0.01	-0.51	-0.55	0.7	1.41	1.02	1.83	2.04	0.39	0.08	2.14	2.48	-0.76	-0.76	0.92	0.66	0	At5g17380	250094_at		pyruvate decarboxylase family protein, similar to 2-hydroxyphytanoyl-CoA lyase (Homo sapiens)	2		lipid, fatty acid and isoprenoid degradation	lactate oxidation		Intermediary Carbon Metabolism				2.88	4.13
At1g59700	0.635	ATGSTU16	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-0.16	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	-1.98	1.71	-0.26	1.8	1.56	-1.45	-1.54	-1.98	-1.96	-1.04	-1.07	1.91	1.07	1.88	0.15	-0.09	0.91	0.5	0.49	0.92	0.99	1.19	1.12	0.47	0.43	0.97	1.34	0.85	1.61	1.4	1.74	0.97	-0.62	1.05	1.52	0.93	0.78	1.45	0.5	0.7	0.82	1.15	1.63	0.22	0.8	0.82	0.56	0.7	0.93	1.23	1.61	1.58	1.38	0.61	1.25	0.89	0.69	-0.23	0.5	0.38	0.63	1.86	1.51	-0.2	0.02	0.32	0.4	1.47	2.02	2.5	2.14	-1.98	0.85	1.78	-1.51	-1.7	-0.65	-1.98	0.84	0.35	-0.09	-0.12	-1.98	-1.62	0.81	-0.82	-1.22	-0.34	1.7	-0.99	-1.71	-1.94	-2.04	-1.67	-2.12	-1.45	-2.31	-1.98	-1.98	-1.98	0.05	0.64	0.52	1.69	-1.32	0.06	-1.3	-0.28	0.38	-0.38	-0.13	-0.51	2.09	2.56	-0.04	2.66	0.95	2	-0.61	0.49	0.48	-1.98	-1.98	-1.15	-1.98	-1.98	1.82	2.29	0.55	1.38	1.33	1.78	1.78	2.61	2.64	2.49	1.68	1.4	-0.61	-1.98	1.55	1.05	-1.86	-1.86	-2.06	-2.16	-0.18	At1g59700	262916_at	ATGSTU16	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	2	toxin catabolism							Glutathione S-transferase, Tau family	4.05	4.98
At1g05560	0.621	UGT1	A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of call	-0.84	-1.81	-0.72	0.3	-1.81	-1.81	-1.81	-1.12	-0.61	-1.81	-0.22	-1.81	-1.81	-1.81	-1.81	-2.17	-1.81	-1.71	-1.45	-1.81	-0.89	1.58	-1.72	4.01	1.29	-1.15	-1.81	-1.81	-1.81	-1.81	-1.81	2.5	1.85	2.29	1.93	0.38	1.53	1.02	1.96	1.71	1.94	1.62	1.62	1.34	1.97	2	1.77	1.86	2.04	1.51	2.6	-0.06	-0.14	2.52	0.49	-0.25	1.77	4.22	-1.08	-0.93	0.45	1.03	0.06	-0.87	0.15	0.26	-0.38	0.12	0.25	0.17	-0.21	0.31	-0.24	-0.27	0.57	0.56	0.07	-0.2	0.65	0.08	0.41	0.12	-0.09	-0.8	0.14	0.36	-1.81	0.92	0.93	1.32	1.69	-1.91	-0.63	-1.81	-1.3	-2	-0.17	-1.81	-0.34	-1.09	2.15	2.02	-1.85	-1.79	-1.54	-1.56	-1.02	-1.3	-0.61	-1	-1.4	-0.68	-2.04	-1.6	-1.03	-1.18	-1.53	-0.89	-0.8	-0.45	0.13	0.88	0.8	1.77	-0.43	-0.18	-0.23	1.01	1.3	-0.28	-0.41	-0.94	3.58	4.32	-2.16	2.66	-1.59	1.25	-1.15	-0.41	-1.33	-1.81	-1.81	-1.81	-1.81	-1.81	2.06	2.25	-0.14	0.75	0.47	-0.85	-1.76	-0.17	-0.97	-0.15	2.31	2.27	2.04	0.37	2.88	2.17	0.66	0.66	1.48	0.5	-0.66	At1g05560	263184_at	UGT1	A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of call	10	UDP-glycosyltransferase activity | cell plate formation (sensu Magnoliophyta)				Phenylpropanoid Metabolism | Glucosyltransferases for benzoic acids			Glycosyl transferase, Family 1	4.25	6.48
At5g22300	0.616	NIT4	Nitrilases (nitrile aminohydrolases, E.C. 3.5.5.1) are enzymes which catalyze the hydrolysis of nitriles to the corresponding carbon acids.The purified enzyme shows a strong substrate specifity for beta-cyano-L-alanine (Ala(CN)), an intermediate product o	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	0.04	1.52	1.56	0.57	-1.02	-1.02	0.17	0	-0.28	0.22	-0.03	0.74	0.05	-1.02	-1.02	-1.02	-0.36	-0.28	0.32	0.34	-0.03	-0.23	-0.59	0.12	0.6	0.56	0.22	1.84	1	-0.35	-1.02	-0.57	-0.11	-1.02	2.5	2.54	-1.02	-1.02	3.33	2.27	2.92	0.73	1.12	0.88	0.83	0.49	0.15	0.44	0.9	1.93	1.76	1.76	1.39	-0.78	0.28	-0.96	-1.02	-0.85	-1.13	0.2	0.27	-1.02	-1.02	-0.73	0.2	1.9	1.48	2.74	3.21	-1.02	-1.02	-1.02	-1.02	-0.27	-1.02	-1.02	-1.02	-1.02	0.2	-0.04	-1.02	0.25	1.49	0.54	-1.02	-0.22	1.78	-1.18	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-1.02	-0.38	1.14	1.01	1.3	0.15	-0.04	0.22	-0.07	0.6	0.54	0.62	0.16	3.9	4.01	-1.02	0.11	-0.32	-0.24	-1.02	-0.32	0.73	-1.02	-1.02	-1.02	-1.02	-1.02	3.21	3.07	0.47	2.13	1.85	0.5	0.26	-0.5	-0.44	-0.16	0.87	1.38	-1.02	-1.02	1.32	0.98	-1.02	-1.02	-1.02	-1.02	-1.2	At5g22300	249942_at	NIT4	Nitrilases (nitrile aminohydrolases, E.C. 3.5.5.1) are enzymes which catalyze the hydrolysis of nitriles to the corresponding carbon acids.The purified enzyme shows a strong substrate specifity for beta-cyano-L-alanine (Ala(CN)), an intermediate product o	9	nitrile hydratase activity | nitrilase activity | ethylene biosynthesis	nitrogen and sulfur utilization	IAA biosynthesis I | aldoxime degradation | acrylonitrile degradation	Nitrogen metabolism | Tryptophan metabolism | Cyanoamino acid metabolism | Benzoate degradation via CoA ligation					3.55	5.22
At1g70580	0.611	AOAT2	Similar to glutamate-glyoxylate transaminase enzyme encoded by AOAT1; glutamate:glyoxylate aminotransferase 2 (GGT2),	-0.74	-0.74	-0.74	-0.74	-0.74	-0.97	-0.74	-0.74	-0.74	-0.74	0.21	-0.2	-0.42	-0.44	-1.2	-0.74	-0.74	-0.74	-0.74	-1.09	-0.74	0.2	-0.79	1.76	1.12	-0.87	-1.15	-0.74	-0.74	-0.74	-0.74	0.51	-0.55	1.06	0.52	-0.52	0.33	0.28	0.3	0.28	0.33	0.93	0.16	-0.74	0.22	0.48	0.6	0.73	0.44	0.38	0.77	1.2	-1.06	-0.74	0.82	-0.53	-0.8	-0.51	-0.45	-0.43	0.03	0.19	1.13	-0.37	0.44	0.3	0.28	0.21	0.49	0.31	1.04	1.58	1.67	0.93	0.66	0.21	1.28	0.24	0.38	0.19	0.5	2.04	1.86	-1.05	0.34	0.6	0.01	0.35	-0.17	0.19	1.2	-0.83	0.05	-0.74	-0.67	-0.45	-0.74	-0.74	-0.74	-0.74	-0.98	-0.85	-0.54	-0.43	-1.19	-0.74	-0.65	-1.12	-0.14	-1	-0.74	-0.74	-0.74	-0.74	-0.74	-1.28	-1	-0.74	-0.74	-0.74	-0.84	0.1	0.13	-0.21	0.38	0.14	-0.4	-0.12	0.01	-0.06	-0.69	-0.26	1.96	1.72	-0.31	-0.65	0.02	-0.57	-1.26	-1.1	-0.14	-0.34	0.27	-0.74	-0.74	-0.74	0.71	0.96	-0.33	1.52	1.33	0.8	0.93	1.97	2.09	2.5	3.16	3.13	1.75	-0.86	3.05	2	0	0	-0.74	-0.74	-1.24	At1g70580	260309_at	AOAT2	Similar to glutamate-glyoxylate transaminase enzyme encoded by AOAT1; glutamate:glyoxylate aminotransferase 2 (GGT2),	4			superpathway of serine and glycine biosynthesis II | alanine biosynthesis II | alanine degradation III | photorespiration	Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism					3.01	4.44
page created by Vincent Sauveplane			07/06/06