Co-Expression Analysis of:

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Institut de Biologie Moléculaire des Plantes (Home)

CYP96A1 (At2g23180)

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Pathways co-expressed in all 4 data sets (with more than 6 annotation points each)

Find below a list of pathways that are co-expressed with the bait. First a list of pathways is given that are co-expressed in all data sets. Lists for each individual dataset are shown underneath. Depending on the number of co-expressed pathways only the top scoring pathways are given; all data can be saved as text using the link above.

there are no co-expressed pathways

To the right of each table a thumbnail of the actual co-expression heatmap is given. Klick on the link to see the heatmap containing all co-expressed genes.

For more information on how these pathway maps were generated please read the methods page

Pathways co-expressed in the Organ and Tissue data set (with more than 6 annotation points)

CYP96A1 (At2g23180)

max. difference between log2-ratios:

4.8

max. difference between log2-ratios excluding lowest and highest 5%:

5.8

Link to organ heatmap

there are no co-expressed genes with more than 6 annotation points

Pathways co-expressed in the Stress data set ( with more than 6 annotation points)

CYP96A1 (At2g23180)

max. difference between log2-ratios:

4.1

max. difference between log2-ratios excluding lowest and highest 5%:

3.6

Pathway

Source

Scores of Genes

p[Score]

No. of Genes

p[genes]

Link to stress heatmap

there are no co-expressed genes with more than 6 annotation points

Pathways co-expressed in the Hormone etc. data set (with more than 6 annotation points)

CYP96A1 (At2g23180)

max. difference between log2-ratios:

4.7

max. difference between log2-ratios excluding lowest and highest 5%:

3.4

Pathway

Source

Scores of Genes

p[Score]

No. of Genes

p[genes]

Link to hormones etc. heatmap

there are no co-expressed genes with more than 6 annotation points

Pathways co-expressed in the Mutant data set (with more than 10 annotation points)

CYP96A1 (At2g23180)

max. difference between log2-ratios:

*

max. difference between log2-ratios excluding lowest and highest 5%:

*

Pathway

Source

Scores of Genes

p[Score]

No. of Genes

p[genes]

Link to mutants heatmap

there are no co-expressed genes with r>0.5

page created by Juergen Ehlting

04/03/06