Co-Expression Analysis of: CYP96A9 (At4g39480) Institut de Biologie Moléculaire des Plantes











































































































































_____________________________________________
____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________

________________________ _____________________________________________ CYPedia Home






















































































































































Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At4g39480 1.000 CYP96A9 cytochrome P450 family protein -0.16 0.08 -0.03 1.34 -0.05 -0.1 0.38 0.11 0.04 -0.05 -0.03 -0.11 -0.3 0.07 -0.77 -0.09 -0.06 0.15 0.76 -0.03 0.29 1.8 0.2 -1.29 -1.05 -0.34 0.63 -0.05 0.29 -0.03 -0.33 -1 0.89 -0.93 0.32 0.03 0.54 -0.98 -0.59 -0.03 -0.03 -0.03 -0.03 0.62 0.93 -0.61 1.18 1.48 0.47 -0.38 0.41 0.08 0.78 0.19 -1 0.58 -0.37 -0.03 -0.03 -0.27 -0.4 -1.46 -1.74 1.12 2.14 1.42 1.43 1.26 1.85 0.81 0.97 -0.08 -0.2 1.05 0.82 0.12 1.06 -1.69 -0.14 0.39 -0.06 -0.2 -1.37 0.06 0.11 0.16 -0.47 0.87 -0.51 -0.6 -0.68 -0.82 -0.16 -0.35 -0.7 -0.95 0.15 0.08 -0.61 -0.17 0.89 -0.34 0.17 -0.07 -0.16 -0.03 -0.03 -0.13 0.05 0.04 -0.29 -0.25 -0.03 0.46 -0.14 0.8 -0.2 0.23 -0.03 0.76 0.26 0.35 -0.36 -0.03 -0.43 -3.88 -0.01 0.44 -0.03 -0.29 -0.13 -0.05 -0.18 0.14 0.57 0.33 -0.77 0.23 -0.42 -1.14 -0.99 -0.11 -0.94 -0.23 At4g39480 252896_at CYP96A9 cytochrome P450 family protein 1






cytochrome P450 family 2.29 6.02
At5g27200 0.658 ACP5 encodes an acyl carrier protein -0.43 -0.08 0.27 0.56 -0.26 0.46 -0.49 -0.09 -0.44 0.22 0.31 -0.19 -0.02 -0.19 -0.31 -0.12 0.11 0.6 0.67 -0.02 -0.8 -0.02 -0.05 -0.73 -0.63 -0.02 -0.02 -0.02 -0.02 -0.02 0.35 -0.02 -0.02 -0.02 -0.26 -0.41 0.07 0.01 -0.79 -0.02 -0.02 -0.02 -0.02 -0.02 -0.02 -0.52 1.48 1.47 0.74 0.57 1.11 0.61 -0.19 0.24 -0.02 -0.02 -0.02 0.13 0.47 -0.69 -0.3 -0.56 -0.35 -0.34 1.6 1.66 1.9 1.88 1.73 1.73 0.26 -0.11 -0.02 0.15 0.45 -0.02 -0.02 -0.02 0.1 0.57 0.31 -0.18 -0.71 0.45 -0.08 -0.28 -1.42 0.44 -0.81 -0.81 -0.02 -0.46 -0.02 -0.02 -0.02 -0.35 0.02 -0.02 -0.02 -0.02 -0.02 -0.02 -0.02 0.23 0.59 -0.02 -0.02 -0.43 0.15 -0.05 -0.02 -0.02 -0.02 -0.02 -0.02 -0.55 -0.02 1.36 -0.02 -0.02 0.18 -0.02 -0.02 -0.02 -0.02 -5.67 -0.02 -0.26 -0.02 -1.15 -0.02 -0.02 -0.21 -1.11 -0.12 -0.24 -0.02 -0.8 -0.02 -0.02 -0.02 0.54 -0.69 -0.02 At5g27200 246814_at ACP5 encodes an acyl carrier protein 6 fatty acid biosynthesis transport facilitation

Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of fatty acids in plastids

2.26 7.57
At5g66150 0.554
glycosyl hydrolase family 38 protein, similar to lysosomal alpha-mannosidase from (Mus musculus) 1.42 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 1.08 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.41 0.59 -0.05 -0.81 -0.05 -0.05 -0.05 -0.05 0.31 -0.05 -0.05 -0.05 -0.05 -0.11 -0.05 1.21 1.4 1.77 1.54 0.96 0.71 0.43 -0.27 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -4.82 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 At5g66150 247129_at
glycosyl hydrolase family 38 protein, similar to lysosomal alpha-mannosidase from (Mus musculus) 2


Glycan Biosynthesis and Metabolism | N-Glycan degradation



0.74 6.59
At3g06860 0.543 MFP2 Fatty acid multifunctional protein. Involved in peroxisomal beta oxidation. 0.18 0.25 0.24 -0.21 -0.82 -0.23 0.08 0.05 0.02 -0.17 -0.34 -0.16 -0.17 -0.14 -0.46 0.17 -0.19 0.08 -0.28 -0.09 0.21 0.76 0.66 -0.17 -0.92 -0.08 0.37 -0.11 -0.01 0.02 -0.45 -0.51 -0.43 -0.21 0.06 -0.12 0.01 -0.05 0 -0.07 -0.07 -0.07 -0.07 0.45 -0.15 -0.03 0.08 0.17 0.16 0.15 0.21 0.03 -0.96 0.19 0.06 0.07 0.14 -0.18 0.2 -0.19 -0.16 -0.12 -0.05 -0.33 1.86 1.81 1.84 1.68 1.96 1.73 0.45 0.01 0.3 -0.04 0.07 -0.24 -0.03 -0.45 0.06 -0.19 -0.11 -0.17 -0.61 -0.05 -0.18 0.16 0.38 0.21 -1.07 -1.03 -0.08 -0.27 -0.12 -0.03 -0.22 -0.2 0.01 -0.34 -0.23 -0.74 0.12 -0.04 0.08 -0.1 -0.13 0.04 0.94 0.23 0.03 0.07 -0.05 -0.1 -0.2 -0.01 -0.06 0.18 0.03 -0.22 -0.33 -0.34 -0.44 -0.09 0.15 -0.33 -0.17 -1.24 0.15 0.13 -0.07 -0.7 0.39 -0.01 -0.56 -0.18 0.44 0.21 0.06 -0.38 -0.68 -0.15 0.12 0.14 0.13 0.46 At3g06860 258555_at MFP2 Fatty acid multifunctional protein. Involved in peroxisomal beta oxidation. 7 fatty acid beta-oxidation | enoyl-CoA hydratase activity | peroxisome
isoleucine degradation III | isoleucine degradation I | valine degradation II | valine degradation I | fatty acid oxidation pathway
Gluconeogenesis from lipids in seeds | fatty acid beta oxidation complex Degradation of storage lipids and straight fatty acids

1.44 3.20
At4g39500 0.542 CYP96A11 cytochrome P450 family protein -0.07 0.4 0.07 1.28 -1.44 -0.12 -1.41 -0.3 -0.07 -0.07 -0.07 -0.07 -0.07 -0.3 -0.01 -0.3 -0.07 -0.15 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 0.65 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.3 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 1 1.69 1.12 0.03 -1.44 0.75 -1.21 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.37 0.59 -0.27 0.2 0.68 1.85 2.22 2.42 1.41 1 1.12 1.49 -0.07 -0.07 -0.07 -0.07 -0.01 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -1.34 -0.51 -0.07 -0.07 -0.02 -0.07 -0.07 -0.07 -0.3 -0.07 -0.28 0.37 -0.05 -0.04 -0.07 -0.07 0.11 -0.16 1.31 0.82 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.52 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -2.76 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.07 -0.19 -0.07 -1.8 -0.07 -0.07 -0.07 -0.07 -0.07 At4g39500 252898_at CYP96A11 cytochrome P450 family protein 1






cytochrome P450 family 1.77 5.18
At1g70080 0.539
terpene synthase/cyclase family protein, similar to (+)-delta-cadinene synthase (Gossypium hirsutum) and to sesquiterpene synthases (Lycopersicon hirsutum) -0.13 0.5 -0.13 0.88 -0.13 -0.13 -0.13 -0.13 -0.13 -0.09 0.39 -0.24 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 0.34 -0.62 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 0.44 -0.13 0.66 0.91 -0.13 0.81 -0.1 -0.13 -0.13 -0.13 -0.13 0.1 -0.16 -0.13 -0.13 -0.13 -0.13 -0.13 2.14 1.82 1.74 1.94 1.8 1.86 0.63 -0.13 -0.13 -0.13 1.82 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -1.56 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 At1g70080 264720_at
terpene synthase/cyclase family protein, similar to (+)-delta-cadinene synthase (Gossypium hirsutum) and to sesquiterpene synthases (Lycopersicon hirsutum) 4





terpenoid metabolism | mono-/sesqui-/di-terpene biosynthesis
1.04 3.70
At1g28170 0.528
similar to steroid sulfotransferase 3 (Brassica napus) 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 1.45 1.36 1.43 0.01 0.01 1.24 -0.44 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -0.31 0.01 -0.37 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -5.11 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 At1g28170 245663_at
similar to steroid sulfotransferase 3 (Brassica napus) 4





triterpene, sterol, and brassinosteroid metabolism | brassinosteroid modulation
0.00 6.55
At5g11380 0.506
similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 (Medicago truncatula) -0.06 0.25 0.05 0.52 -0.07 -0.06 0.39 0.11 0.02 -0.02 -0.1 -0.11 -0.3 -0.09 0.28 -0.08 0.16 -0.01 0.17 -0.35 0.11 0.18 0.02 -0.28 0.11 0.07 -0.15 0.04 -0.23 -0.23 0.08 -0.01 -0.01 0.25 -0.07 -0.04 -0.01 -0.02 -0.06 -0.01 -0.01 -0.01 -0.01 -0.11 -0.01 -0.22 0.33 0.07 0.27 -0.23 0.08 0.21 0.38 -0.05 -0.01 -0.04 -0.01 0.04 0.27 0.05 -0.09 0.03 0.2 0.64 0.09 0.28 0.19 0.46 0.14 -0.06 0 -0.22 0.11 0.38 -0.01 0.2 0.51 -0.12 0.36 -0.01 0.24 -0.11 0.03 0.1 -0.01 0.11 -0.2 0.33 -0.13 -0.36 0.07 0.12 -0.07 -0.41 -0.03 0.09 -0.28 -0.35 -0.16 -0.15 -0.16 -0.14 -0.25 -0.06 -0.4 0.04 -0.39 -0.31 -0.01 -0.2 -0.05 0.26 -0.19 0.01 -0.05 0.24 -0.03 0.24 0.6 -0.28 -0.22 -0.05 0.07 0.08 0.23 -2.27 0.01 -0.15 -0.01 0.06 -0.2 0.1 0.32 0.03 0.32 0.28 -0.01 0.15 -0.04 0 -0.08 -0.31 -0.3 -0.19 At5g11380 250362_at
similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 (Medicago truncatula) 4
biogenesis of cell wall isopentenyl diphosphate biosynthesis -- mevalonate-independent | pyridoxal 5'-phosphate biosynthesis | thiamine biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.69 2.91
At3g61490 0.502
glycoside hydrolase family 28 protein, weak similarity to Polygalacturonase (Agrobacterium tumefaciens) -0.63 -0.2 -0.24 2.2 -0.17 0.02 0.49 0.16 0.63 -0.16 0.52 -0.19 -0.04 0.12 -0.12 0.77 1.19 0.6 1.34 -0.13 0.2 1.07 0.11 -0.05 -0.38 -0.1 -0.08 0.03 -0.09 -0.49 0.32 -0.02 -1.02 0.02 0.03 -0.03 0.12 -0.18 -0.51 -0.07 -0.07 -0.07 -0.07 0.21 1.09 -0.2 0.41 -0.18 0.09 -0.02 -0.15 -0.24 0 0.37 -1.51 -0.43 -0.52 0.34 0.36 -0.17 -0.38 -0.61 -0.36 1.85 0.1 -0.02 0.81 0.71 -0.18 -0.24 0.15 -0.63 0.56 -0.07 -0.27 -0.06 0.56 0.45 0.39 0.92 0.23 0.32 -0.82 -0.28 -0.48 0 -0.8 -0.57 -1.46 -1.49 0.13 0.28 0.12 0.02 -0.04 -0.07 0.16 0.47 0.05 0 0.1 0.09 0.68 0.07 0.74 0.23 -0.43 -0.39 -0.54 0.18 -0.18 0.15 -0.48 0.72 0.09 0.25 0.31 -0.01 -0.08 -0.04 -0.53 -0.18 0.3 -0.23 0.66 -6.23 -0.57 -0.89 -0.07 0.08 -0.59 0.68 0.47 -0.72 0.4 0.52 -0.12 0.77 -0.02 -0.26 0.76 0.07 0.67 -0.17 At3g61490 251317_at
glycoside hydrolase family 28 protein, weak similarity to Polygalacturonase (Agrobacterium tumefaciens) 2



Cell Wall Carbohydrate Metabolism | pectin metabolism


1.59 8.43



































































































































































page created by Alexandre OLRY 04/27/06