Co-Expression Analysis of: CYP97A3 (At1g31800) Institut de Biologie Moléculaire des Plantes

















































































































































































































_____________________________________________
____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________ ____________________________________

________________________ _____________________________________________ CYPedia Home




























































































































































































































Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap
































































































































































































































MS Excel table
































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.





























































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3






















































































































































































































greater than zero                                                         


























































































































































































































less than zero                                                         


























































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At1g31800 1.000 CYP97A3 cytochrome P450 family protein -0.52 0.05 0.21 0.71 -0.06 0.22 0.09 -0.11 -0.85 -0.78 0.01 -0.11 -1.13 0.07 -0.26 -0.64 0.27 -0.14 -0.5 0.06 -0.66 -0.67 -0.02 -0.17 -0.21 0.13 0.13 -0.06 -0.01 -0.02 -0.1 -0.07 0.33 0.04 -0.38 0.24 0.23 0.19 0.17 0.12 0.1 0.02 0.02 -0.03 -0.91 0.19 -0.57 -0.46 -0.33 -0.34 0.18 0.18 0.01 0.13 -0.2 -0.09 -1.31 0.06 -0.9 0.11 -0.8 0.09 -0.1 0.2 0.14 -0.08 -0.05 0.2 0.01 0.08 0.32 0.47 -0.14 0.39 0.16 0.17 0.21 -0.52 0.08 0.08 0.1 -0.12 -0.03 -0.33 0.33 0.12 0.31 -0.12 0.06 0.27 -0.07 -0.2 0.21 0.07 -0.25 0 0.34 -0.11 0.1 -0.06 0.25 0.35 0.1 0.04 -0.1 -0.83 -1.14 -0.92 0.42 -0.47 -0.06 0.32 0.44 0.41 0.25 0.15 0.02 -0.22 -0.14 -0.16 0.43 -0.15 -0.38 -0.64 -0.01 0.01 0.11 0.39 -0.06 -0.12 -0.07 -0.04 0.01 -0.24 0.24 0.09 -0.51 0.06 0.44 0.23 0.01 -0.12 -0.32 0.08 -0.34 0.34 0.01 0.44 -0.02 -0.77 -0.73 0.89 0.3 0.69 0.22 -0.35 -1.25 -0.25 0.51 -0.49 0.65 0.1 -0.11 -0.36 -0.09 0.04 0.19 0.18 0.44 0.46 -0.25 -0.36 0.74 0.33 0.67 0.07 0.58 0.41 0.49 0.12 0.07 0.27 0.03 0.43 0.6 0.81 0.33 0.79 0.33 0.38 0.42 0.44 0.06 -0.01 0.3 -0.57 -0.15 0.03 0.22 -0.1 -0.08 0.03 -0.35 -0.46 -0.6 0.4 -0.05 0.88 0.19 -0.23 -0.04 -0.09 0 -0.51 1.35 At1g31800 246268_at CYP97A3 cytochrome P450 family protein 1






cytochrome P450 family 1.36 2.66
At5g13510 0.737
ribosomal protein L10 family protein -0.48 0.13 0.06 0.64 0.26 -0.08 0.28 0.14 -1.46 -0.67 -0.16 0.11 -1.88 -0.23 -0.63 -1.03 0.03 -0.01 -0.47 -0.07 -0.59 -0.65 0.01 -0.12 -0.38 -0.03 0.26 0.02 0.05 -0.16 -0.38 -0.18 0.18 0.06 -0.3 0.38 0.37 0.41 0.22 0.17 0.37 0.32 0.06 -0.17 -1.11 0.03 0.35 -0.38 -0.42 -0.36 0.05 0.41 -0.08 0.23 -0.26 0.35 -0.89 0.31 -0.73 0.1 -0.7 0.25 -0.09 0.26 0.28 0.05 -0.17 -0.1 0.16 0.17 -0.12 -0.02 0.03 0.34 0.19 -0.08 0.17 -0.37 0.41 0.12 0.27 0.07 0.19 0.01 0.02 0.18 0.42 0.07 0.1 0.16 0.13 -0.05 0.24 -0.07 -0.08 -0.05 0.06 0.02 0.11 -0.04 -0.01 0.3 0.28 0.25 -0.41 -1.27 -1.49 -1.6 -0.16 -0.34 -0.01 -0.21 0.04 0.05 0.3 0.25 0.03 -0.53 -0.32 -0.56 -0.07 -0.38 -0.98 -1.39 -0.39 -0.32 0.02 0.54 0.18 0.04 0.12 -0.19 0.18 0.16 0.04 -0.15 -0.3 0.39 0.3 0.21 0.4 0.05 -0.63 0.3 0.09 0.47 0.48 0.19 -0.03 -0.04 -0.24 0.16 0.24 0.48 0.12 -0.16 -0.56 -0.12 0.53 0.18 0.64 0.51 0.25 0.08 0.09 0 0.21 0.43 0.4 0.09 0.09 0.52 0.57 0.38 0.44 0.31 -0.18 -0.06 0.24 0.19 0.11 0.08 0.57 0.08 0.32 0.27 0.05 0.49 0.17 0.17 0.27 0.42 0.17 0.08 0.04 -0.77 -0.08 0.08 -0.07 0.04 0.22 -0.04 0.05 -0.69 -2.46 1.48 0.73 1.68 0.44 -0.01 0.17 -0.01 0.07 -0.36 1.87 At5g13510 245852_at (m)
ribosomal protein L10 family protein 2
protein synthesis | ribosome biogenesis
Ribosome



1.32 4.33
At4g28660 0.733
photosystem II reaction centre W (PsbW) family protein -2 0.08 0.25 1.38 -0.11 -0.36 0 -0.12 -2 -1.1 -0.27 0.08 -2.66 -0.23 -0.93 -1.47 -0.19 -0.11 -1.2 -0.25 -0.82 -1.14 -0.08 -0.03 -0.47 -0.42 0.12 -0.02 0.1 -0.28 -0.84 -0.16 0.35 -0.05 -0.39 0.11 0.19 0.27 0.07 0.01 0.34 0.5 0.42 -0.04 -1.54 0.09 0.14 -0.42 -0.19 -0.25 0.13 0.38 -0.06 0.38 -0.22 0.49 -1.04 0.35 -0.96 0.26 -0.71 0.52 -0.06 0.23 0.31 -0.08 -0.41 -0.31 0.07 0.14 0.01 0.27 -0.05 0.07 -0.06 0.28 0.17 -0.63 0.65 0.19 0.15 -0.28 0.01 -0.1 0.28 -0.03 0.31 -0.2 0.03 0.18 0.15 -0.16 0.18 -0.12 -0.16 0.27 -0.07 -0.32 0.49 0.14 0.55 0.36 0.6 0.17 -0.32 -1.4 -1.8 -1.93 0.53 0.12 0.28 0.05 0.23 0.21 0.47 0.22 0.03 -0.66 -0.41 -0.3 0.16 -0.13 0 -0.2 0.46 0.11 0.11 0.76 0.5 0.04 -0.2 -0.4 -0.17 0.28 -0.02 -0.14 -0.28 0.16 -0.14 0.43 0.06 -0.1 -1.79 0.31 0.33 1.06 0.28 0.68 0.22 -0.19 -0.08 0.71 0.23 0.57 0.22 -0.42 0.05 -0.25 0.57 -0.17 0.96 0.67 0 -0.64 -0.89 -0.26 0.48 0.97 0.47 0.52 -0.08 0.13 0.53 0.39 1.19 0.69 0.05 0.51 0.24 -0.14 -0.06 0.35 -0.06 0.19 -0.02 1.2 1.38 1.23 0.37 0.67 0.49 0.45 0.74 0.43 0.62 -0.65 -0.13 0.23 -0.48 -0.22 -0.11 -0.2 -0.28 -0.72 -2.61 1.48 1.26 1.12 0.32 0.37 0.21 -0.32 0.09 -0.18 0.97 At4g28660 253790_at
photosystem II reaction centre W (PsbW) family protein 2
photosynthesis
Photosynthesis



2.12 4.15
At3g13120 0.732
30S ribosomal protein S10, chloroplast, putative -0.39 0.21 0.35 0.28 0.05 -0.22 0 -0.06 -1.66 -0.95 -0.34 -0.02 -2.29 -0.18 -0.56 -1.12 -0.02 0.13 -0.76 -0.23 -0.56 -0.89 0.08 0.08 -0.56 -0.25 0.28 0.09 0.13 -0.34 -0.36 0.07 0.35 0.13 -0.13 0.49 0.55 0.54 0.37 0.3 0.56 0.45 0.13 -0.19 -1.3 0.4 0.19 -0.63 -0.27 -0.35 0.1 0.46 -0.02 0.39 -0.24 0.32 -0.74 0.23 -0.76 0.3 -0.74 0.46 -0.02 0.28 0.37 0.11 -0.07 0.01 0.01 0.13 0.04 0.24 0.04 0.26 0.46 0.16 0.26 -0.26 0.32 0.24 0.16 0.02 -0.08 -0.18 0.24 0.06 0.26 0.18 0.38 0.18 0.15 0.07 0.15 0.02 -0.27 0.16 0.3 0.03 0.38 0 0.31 0.09 0.15 0.16 -0.28 -0.99 -1.73 -1.97 0.11 -0.16 -0.02 0.09 0.34 0.03 0.28 0.41 0.08 -0.45 -0.65 -0.75 0.34 -0.2 -0.14 -0.35 -0.12 -0.2 0.02 0.54 0.15 0.04 -0.15 -0.04 -0.04 0.25 0.32 -0.04 -0.22 0.26 0.27 0.17 0.3 0.08 -0.28 0.02 -0.48 0.34 0.3 0.11 -0.11 -0.21 0.05 0.14 0.33 0.45 0.17 0.22 -0.48 -0.05 0.3 0.36 0.61 0.43 0.35 0.03 -0.12 -0.19 -0.07 0.37 0.01 0.22 0.02 0 0.22 0.27 0.14 0.07 0.07 0.09 -0.06 -0.6 -0.41 -0.04 0.44 0.23 0.26 0.23 -0.11 0.65 0.26 0.42 0.26 0.43 -0.15 0.01 -0.19 -0.76 -0.17 0.41 0.01 -0.03 0.31 -0.13 -0.12 -0.68 -1.6 1.33 0.37 1.42 0.18 0.1 0.53 0.02 0.39 -0.5 1.13 At3g13120 257190_at
30S ribosomal protein S10, chloroplast, putative 4


Ribosome



1.23 3.71
At4g34190 0.718
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. -1.3 0.13 0.42 0.77 -0.19 -0.24 0.08 -0.07 -1.28 -0.74 -0.17 0.07 -1.66 -0.18 -0.41 -1.36 -0.03 -0.06 -0.63 -0.07 -0.48 -0.84 0.06 0.07 -0.27 -0.21 0.06 0 0.05 -0.15 -0.46 -0.01 0.31 0.02 -0.06 0.28 0.25 0.24 0.15 0.12 0.31 0.31 0.04 -0.32 -1.17 0.19 0.31 -0.57 -0.43 -0.33 0.2 0.33 0.04 0.27 -0.28 0.26 -0.67 0.24 -0.55 0.23 -0.53 0.36 0.07 0.24 0.17 0.08 0.13 -0.16 -0.1 0 0.26 0.09 0.08 0.34 0.39 0.45 0.23 -0.22 0.25 0.13 0.13 -0.11 -0.09 -0.07 -0.11 0.03 0.34 0.24 0.17 0.21 -0.03 -0.04 0.15 -0.09 -0.05 0.1 0.06 -0.12 0.41 0.1 0.34 0.03 -0.02 0.08 -0.09 -0.57 -0.95 -1.01 -0.59 0.13 0.67 0.56 0.92 0.47 0.07 0.16 0.17 -0.19 -0.38 -0.31 0.19 -0.11 -0.17 -0.05 0.24 0.07 0.22 0.45 0.03 -0.03 -0.09 -0.18 -0.24 0.05 0.28 -0.23 -0.28 0 0.07 0.23 -0.13 0.07 -0.3 -0.14 0.05 0.2 0.22 0.16 -0.09 -0.21 -0.08 0.33 0.49 0.25 0.16 0 -0.91 -0.34 0.28 0.01 0.51 0.27 0.36 -0.1 -0.34 -0.28 -0.03 0.26 0.18 0.06 -0.19 -0.21 -0.26 0.11 0.39 -0.02 0.41 0.22 -0.03 -0.02 0.33 0.48 0.05 0.25 0.27 0.33 0.45 0.79 0.41 0.38 0.41 0.46 0.18 0.15 0.1 -0.61 -0.19 0.18 -0.16 0.1 0.16 -0.46 0.1 -0.96 -2.49 1.75 0.17 0.89 -0.05 0.11 0.01 -0.21 -0.11 -0.03 1.39 At4g34190 253272_at
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. 8 response to high light intensity | chlorophyll binding


Photosystems | additional photosystem II components | Early light-inducible proteins


1.25 4.24
At1g11860 0.717
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala -0.63 -0.37 0.55 0.36 -0.06 -0.54 -0.36 -0.16 -1.79 -1.11 -0.14 0.01 -3.22 -0.11 -0.72 -1.65 0.11 0.15 -0.87 -0.11 -0.71 -1.17 -0.07 -0.14 -0.49 -0.22 0.1 -0.04 -0.05 -0.28 -0.57 -0.1 0.11 0.05 -0.33 0.26 0.34 0.36 0.14 0.14 0.23 0.22 -0.3 -0.19 -1.55 0.22 -0.07 -0.55 -0.26 -0.5 0.02 0.42 0.05 0.25 -0.14 0.2 -0.78 0.18 -0.8 0.26 -0.67 0.34 0.08 0.28 0.26 0.11 -0.1 -0.11 0.06 0.1 0.66 0.11 0 0.46 0.34 0.27 0.37 -0.53 0.35 0.4 0.74 0.5 0.36 0.2 0.43 0.1 0.4 0.2 0.13 0.33 0.51 0.4 0.59 0.65 0.21 0.12 0.28 0.1 0.51 0.24 -0.01 0.1 0.26 0.23 -0.13 -0.82 -1.68 -2.06 0.08 0.02 0.19 -0.01 -0.2 -0.13 0.46 0.45 0.3 -0.2 -0.43 -0.65 0.1 -0.06 -0.56 -1.47 -0.73 -0.63 0.27 0.73 0.46 0.35 0.38 0.19 0.15 0.22 0.56 0.28 0.21 0.5 0.23 0.31 0.68 -0.13 -0.74 0.35 -0.22 0.53 0.31 0.61 0.64 -0.22 -0.35 0.26 0.14 0.72 0.12 0.05 -0.31 -0.13 0.59 0.18 0.51 0.55 0.34 0.19 -0.31 0.24 0.07 0.15 0.47 0.15 0.13 0.04 0.3 0.39 -0.1 0.31 0.28 0.08 -0.06 -0.69 -0.47 -0.39 0.42 0.31 0.56 0.24 0.22 0.74 0.53 0.37 0.59 0.53 0.36 0.32 0.14 -0.48 -0.21 -0.14 0.16 -0.1 0.04 -0.18 -1.14 -1.55 -1.01 0.72 -0.22 1.13 0.43 0.18 0.39 -0.27 0.41 -1.03 1.68 At1g11860 264394_at
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala 2

glycine degradation I Nitrogen metabolism | Glycine, serine and threonine metabolism | One carbon pool by folate



1.67 4.90
At2g24060 0.715
translation initiation factor 3 (IF-3) family protein 0.14 -0.01 0.07 1.25 0.2 -0.21 -0.25 -0.16 -1.62 -0.96 -0.33 -0.08 -1.98 -0.3 -1.14 -1.11 -0.3 -0.09 -0.65 -0.22 -0.86 -0.74 -0.17 -0.07 -0.97 -0.27 0.12 0.17 0.12 -0.45 -0.43 -0.04 0.24 -0.07 -0.63 0.3 0.38 0.15 0.13 0.31 0.28 0.48 0.23 -0.2 -0.91 0.47 0.64 -0.84 -0.71 -0.39 0.21 0.15 -0.2 0.16 -0.37 0.36 -1.21 0.23 -0.89 0.1 -1.03 0.12 -0.27 0.39 0.46 0 -0.38 -0.05 0.19 0.3 -0.01 0.63 0.14 0.53 0.42 0.52 0.55 -1.06 0.42 0.23 0.41 -0.21 0.21 0.14 0.55 0.24 0.39 0.36 0.24 0.59 0.27 0.2 0.17 -0.17 -0.03 0.07 0.51 0.14 0.35 0.06 0.32 0.12 0.46 0.31 -0.54 -2 -1.59 -1.52 1.19 0.08 0.16 0.1 0.32 0.16 0.4 0.16 -0.18 -1.09 -0.54 -0.63 0.65 -0.16 -0.28 -0.3 0.07 -0.02 0.12 0.26 0.09 0.05 -0.33 -0.62 0.01 0.12 0.42 0.27 -0.02 0.21 0 0.15 0.28 -0.22 -1.37 0.14 0.1 0.28 0.56 0.17 -0.49 -0.28 -0.02 0.94 0.62 0.7 0.16 0.37 -0.33 -0.44 0.6 0.06 0.46 0.28 0.34 -0.36 -0.59 -0.28 0.26 0.42 0.07 0.99 0.39 0.73 -0.06 0.45 0.34 0.28 -0.34 -0.31 -0.4 -0.01 -0.18 0.2 0.59 0.21 0.33 0.81 -0.03 1.05 0 0.22 0.46 0.4 0.47 0.41 0.36 -1.34 0.01 0.28 -0.03 -0.06 0.09 -0.01 -0.61 -0.57 -0.39 -0.19 0.36 1.01 0.34 0.17 1 -0.26 0.01 -1.04 1.44 At2g24060 266575_at
translation initiation factor 3 (IF-3) family protein 2


Translation factors



1.73 3.45
At1g48350 0.710
ribosomal protein L18 family protein -0.43 0.1 0.52 0.35 -0.01 -0.47 0.01 -0.13 -1.9 -1 -0.28 -0.02 -2.97 -0.19 -0.57 -1.23 0.01 0.03 -0.8 -0.14 -1.04 -0.99 -0.08 -0.04 -0.61 -0.13 0.22 0.15 0.16 -0.43 -0.48 0.04 0.24 0.2 -0.21 0.4 0.61 0.65 0.24 0.33 0.5 0.56 0.11 -0.26 -1.43 0.21 0.51 -0.64 -0.65 -0.45 0.19 0.43 -0.15 0.3 -0.5 0.26 -0.93 0.38 -0.82 0.16 -0.84 0.34 0 0.47 0.46 0.08 0.01 -0.06 0.07 0.22 0.06 0.46 0.18 0.84 0.3 0.24 0.37 -0.31 0.48 0.24 0.16 -0.08 -0.07 -0.32 0.16 0.08 0.34 -0.01 0.14 0.56 0.18 -0.02 0.08 -0.05 -0.43 -0.07 0.31 0.12 0.54 -0.01 0.06 0.01 0.23 0.25 -0.18 -1.22 -1.85 -2.37 0.22 0.07 0.17 -0.09 0.41 -0.01 0.33 0.28 0.13 -0.39 -0.55 -0.93 0.34 -0.15 -0.22 -0.67 -0.32 -0.28 0.04 0.61 0.05 -0.08 -0.18 -0.28 -0.07 0.05 0.32 -0.03 -0.23 0.18 -0.08 0.3 0.42 0.13 -0.39 0.05 -0.3 0.37 0.59 0.1 -0.32 -0.11 0.09 0.56 0.26 0.75 0.01 0.3 -0.11 -0.18 0.07 0.22 0.6 0.6 0.37 0.19 -0.3 -0.2 0.07 0.27 0.27 0.48 0.05 0.74 0.19 0.28 0.68 0.5 0.26 0.18 -0.06 -0.43 -0.34 0.06 0.56 0.67 0.43 0.51 0.15 0.67 -0.07 0.23 0.46 0.68 0.15 0.21 -0.22 -0.91 0 0.28 0.1 0.16 0.38 -0.35 -0.38 -0.34 -3.21 1.81 0.87 1.29 0.07 0.22 0.27 0.02 -0.03 -0.56 1.95 At1g48350 262235_at
ribosomal protein L18 family protein 2


Ribosome



1.60 5.16
At3g44890 0.705 RPL9 50S ribosomal protein L9, chloroplast (CL9) -0.38 -0.02 0.33 0.16 0.03 0.17 0.46 0.42 -1.67 -1.26 -0.09 -0.05 -2.75 -0.19 -0.45 -1.13 0.12 -0.24 -1.12 0.07 -0.95 -1.32 -0.15 -0.31 -0.76 -0.39 0.3 -0.11 -0.13 -0.45 -0.92 0.1 0.3 0.08 -0.38 0.37 0.42 0.51 0.13 0.13 0.57 0.44 0.05 -0.28 -1.45 0.23 0.36 -0.55 -0.85 -0.67 0.18 0.31 -0.19 0.21 -0.4 0.24 -0.69 0.39 -0.45 0.21 -0.6 0.27 -0.02 0.55 0.33 -0.04 -0.2 -0.19 -0.11 -0.06 0.61 0.3 0.36 0.28 0.21 0.04 0.49 -0.17 0.55 0.15 0.63 0.47 0.42 0.32 0.39 0.03 0.3 0.18 0.28 0.34 0.24 0.3 0.39 0.14 -0.04 -0.11 0.31 0.45 0.59 0.34 0.11 0.16 0.09 0.26 -0.17 -1.34 -1.89 -2.46 -0.09 -0.17 0.06 0.05 -0.12 -0.25 0.15 0.28 0.09 -0.66 -0.56 -0.74 0.3 0.19 -0.4 -0.63 -0.48 0.03 -0.06 0.53 0.42 0.24 0.2 -0.11 -0.05 0.06 0.23 0.26 0.32 0.11 0.21 0.34 0.56 0.06 -0.73 0.22 0 0.56 0.33 0.14 0.03 -0.2 0.1 0.03 0.11 0.59 0.21 -0.08 0 -0.08 0.53 -0.17 0.74 0.63 0.4 0.24 -0.07 -0.02 0.06 0.44 0.79 0.31 0.14 -0.25 0.04 0.56 0.35 0.5 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.18 0.43 0.24 0.71 0.34 0.12 0.35 0.51 0.06 0.17 -0.06 -0.8 -0.26 0.05 -0.02 0.1 0.39 -0.16 -0.1 -0.4 -1.49 0.24 -1.02 0.82 0.07 -0.02 0.28 -0.14 -0.56 -0.67 1.95 At3g44890 246339_at RPL9 50S ribosomal protein L9, chloroplast (CL9) 6 protein biosynthesis | plastid large ribosomal subunit protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



1.62 4.70
At4g04350 0.705
similar to Leucyl-tRNA synthetase (Bacillus subtilis) -0.79 -0.48 0.3 0.04 0.02 -0.16 0.28 0.02 -1.2 -0.81 -0.44 -0.11 -1.7 -0.44 -0.66 -0.91 -0.05 -0.08 -0.53 -0.24 -0.65 -0.73 -0.28 -0.04 -0.24 0 0.28 -0.09 -0.15 -0.1 -0.37 0.02 0.41 0.01 -0.09 0.48 0.36 0.06 0.43 0.3 0.24 0.16 -0.04 -0.34 -0.92 0.23 -0.51 -0.85 -0.19 -0.45 0.07 0.31 -0.18 0.12 -0.3 -0.17 -0.86 0.13 -0.89 0.05 -0.65 0.09 -0.25 0.07 0.19 -0.08 -0.44 0.5 0.42 0.25 0.52 0.27 -0.17 0.21 0.19 -0.35 0.03 -0.7 0.45 0.18 -0.08 0.22 -0.02 -0.31 0.54 0.13 0.44 -0.06 -0.17 0.32 0.03 -0.02 0.05 0.21 -0.11 -0.22 0.56 0.19 0.54 0.15 0.06 -0.06 0.33 0.14 -0.61 -0.76 -1.27 -1.77 0.31 -0.13 0.24 -0.05 0.09 0.09 0.3 -0.11 -0.1 -0.02 -0.25 -0.9 0.37 0.01 0.15 0.32 0.02 -0.22 -0.12 -0.06 0.04 -0.19 -0.23 0.34 0.4 -0.37 0.2 0.28 -0.16 -0.05 0 0.22 0.16 -0.55 -1.35 0.41 0.32 0.06 0.06 0.03 -0.18 0.13 -0.08 0.36 0.09 0.65 -0.02 -0.17 -0.22 -0.52 0.24 0.45 0.56 0.11 -0.36 -0.4 -0.09 -0.05 0.47 0.22 0.65 0.5 0.13 0.49 0.28 0.56 0.52 0.45 0.38 0.38 0.38 0.4 0.1 -0.02 0.08 0.33 0.38 0.52 0.36 0.61 0.18 0.28 0.45 0.31 0.3 -0.15 0.08 -0.32 0.16 -0.17 -0.15 0.28 0.1 0.28 -1.12 -0.28 -2.65 1.23 0.75 2.29 0.37 0.33 0.24 0.64 0.05 -0.24 2 At4g04350 255328_at
similar to Leucyl-tRNA synthetase (Bacillus subtilis) 2
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway Valine, leucine and isoleucine biosynthesis | Aminoacyl-tRNA biosynthesis



1.42 4.95
At1g60600 0.704
UbiA prenyltransferase family protein -0.19 0.04 0.37 1.05 0.02 -0.11 0.22 0.38 -1.66 -1.07 -0.36 -0.27 -1.85 -0.41 -0.56 -0.89 -0.22 0.11 -0.57 -0.26 -0.63 -0.95 0.07 -0.3 -0.48 0.06 0.35 -0.06 0.06 -0.53 -0.6 0.1 0.04 0.13 -0.46 0.43 0.48 0.42 0.25 0.39 0.6 0.46 0.28 -0.28 -0.76 0.31 0.26 -1.07 -0.57 -0.41 -0.19 0.38 -0.17 0.08 -0.5 0.09 -1.32 -0.02 -1.12 0.2 -1.04 0.32 -0.13 0.19 0.11 -0.22 -0.05 -0.1 0.12 -0.09 -0.08 0.44 0.32 0.27 -0.03 -0.19 0.43 -0.77 0.24 0.12 0.32 0.14 0.17 -0.26 0.09 0.38 0.02 -0.01 0.11 0.17 0.18 0.04 0.26 0.04 -0.1 -0.02 0.06 0.38 0.24 0.3 -0.01 0.35 0.2 0.13 -0.6 -1.35 -1.55 -1.86 0.8 0.43 0.08 0.36 0.57 0.32 0.28 0.24 0.02 -0.45 -0.52 -0.47 -0.03 0.21 -0.08 0.33 0.31 0.33 0.19 0.8 0.25 0.35 0.16 -0.02 0.1 0.12 -0.16 0.51 0.08 0.38 0.1 0.09 0.48 -0.63 -0.55 -0.05 -0.96 0.78 0.38 -0.13 -0.44 -0.81 -1.37 0.26 0.7 0.84 0.21 0.17 -0.04 -0.34 0.61 -0.09 0.83 0.64 0.11 -0.62 0.13 0.04 0.21 0.39 -0.11 0.43 0.48 0.21 0.7 0.52 0.27 0.68 0.24 0.24 0.24 0.14 0.17 0.24 -0.11 0.19 0.03 0.33 0.09 0.4 -0.26 -0.39 0.17 0.63 0.21 0.21 -0.26 -1.29 0.08 0.4 -0.11 -0.02 0.28 -0.33 0.07 -0.09 -1.13 0.95 0.97 0.84 0.46 0.17 0.7 0.57 0.14 -2.08 0.84 At1g60600 264963_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway Ubiquinone biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Phylloquinone biosynthesis
plastochinone and phylloquinone biosynthesis | phylloquinone biosynthesis
1.78 3.13
At1g01080 0.701
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative -0.53 0.05 0.25 -0.07 -0.1 -0.51 -0.35 -0.2 -1.83 -1.17 -0.46 -0.27 -2.48 -0.39 -0.84 -1.28 -0.12 -0.14 -0.82 -0.28 -0.83 -0.98 0.05 -0.34 -0.52 -0.16 0.1 0.03 -0.19 -0.19 -0.56 -0.12 0.05 0.08 -0.4 0.39 0.39 0.33 0.25 0.26 0.39 0.27 0.01 0.04 -0.98 0.15 -0.24 -0.35 -0.41 -0.37 -0.04 0.31 -0.23 0.13 -0.38 0.11 -1.05 0.16 -1.06 0.11 -0.75 0.22 -0.28 0.49 0.33 -0.07 -0.17 0.04 0.13 -0.08 0.38 0.07 0.23 0.41 0.32 0.26 0.63 -0.75 0.25 0.31 0.61 0.54 0.3 0.07 0.52 0.11 0.38 0.31 0.19 0.63 0.21 0.42 0.37 0.46 0.25 -0.02 0.02 0.41 0.44 0.64 0.5 0.62 0.05 0.3 -0.48 -1.19 -1.67 -1.98 0.54 0.44 0.28 0.63 0.44 0.48 0.12 0.21 -0.08 -0.65 -0.66 -1.09 0.3 0 -0.35 -0.42 0.42 0.49 0.1 0.66 0.28 0.23 0.16 0.01 0.08 -0.15 0.02 0.31 0.27 0.26 0.45 0.46 0.34 -0.31 -0.56 0.17 -0.59 0.54 0.35 0.07 -0.1 -0.55 -0.36 0.22 0.3 0.17 0.79 0.15 -0.1 -0.56 0.11 0 0.67 0.55 0.03 -0.79 -0.26 0.22 0.34 0.08 0.38 0.56 0.14 0.3 0.28 0.64 0.57 0.37 -0.38 -0.67 -0.63 -0.83 0.21 0.26 0.56 0.39 0.56 0.4 0.12 0.59 0.5 0.51 0.46 0.76 0.1 0.16 -0.15 -0.65 -0.11 -0.04 0.32 0.03 -0.01 -0.22 -0.1 -0.75 -2.94 1.87 0.76 1.4 0.49 0.08 0.06 0.3 0.23 -1.25 1.53 At1g01080 261577_at
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 4



mRNA processing in chloroplast


1.68 4.81
At2g36990 0.698 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -0.9 0.05 0.26 -0.28 -0.14 -0.42 -0.37 -0.46 -1.78 -1.03 -0.44 -0.18 -2.65 -0.03 -1.19 -1.05 -0.54 -0.09 -0.6 -0.49 -1.04 -0.74 0.15 -0.27 -0.56 -0.07 0.28 0.51 -0.07 -0.5 -0.42 0.03 0.15 -0.1 -0.9 0.4 0.39 0.34 0.18 0.31 0.37 0.53 -0.02 -0.26 -1.15 0.28 -0.26 -0.97 -0.17 -0.15 -0.02 0.33 0.13 0.14 -0.08 0.16 -1.14 0.3 -1.06 -0.01 -0.73 0.44 -0.01 0.71 0.01 -0.28 -0.22 0.26 0.33 0.26 0.17 0.2 -0.39 0.11 0.04 0.2 0.72 -1.18 0.22 0.25 0.22 0.19 0.26 0.07 0.13 -0.16 0.3 0.24 0.16 0.43 0.26 0.39 0.33 0.28 0.23 0 0.17 -0.02 0.12 0.36 0.25 0.53 0.24 0.44 -0.57 -0.59 -0.83 -1.07 0.47 0.02 0.03 0.41 0.83 0.02 0.28 0.28 -0.07 -0.23 -0.02 -0.31 0.53 0.21 -0.23 -0.23 0.21 0.22 -0.16 0.75 -0.06 0.22 -0.14 0.22 0.21 -0.08 0.35 0.24 -0.14 0.36 0.24 0.28 0.15 -0.42 -1.06 0.22 -0.16 0.15 0.22 0.21 0.17 -0.03 -0.35 0.56 0.28 0.63 0.5 0.35 0.28 -0.74 -0.05 0.26 0.64 -0.06 -0.1 0.23 0.35 0.3 0.18 0.14 0.19 0.37 -0.13 0.01 0.25 0.51 0.43 0.21 -0.05 0.17 0.15 0.08 0.33 -0.02 0.53 0.2 0.23 0.76 -0.06 0.85 0.25 0.53 0.61 0.71 0.2 0.3 -0.19 -0.69 0.1 0.05 -0.28 -0.08 0.28 0.16 -0.9 -0.05 -2 0 -0.88 1.48 0.95 0 0.26 0.71 -0.21 -1.51 1.35 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


1.72 4.12
At3g25660 0.694
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 0.15 0.14 0.21 0.22 0.11 -0.03 0.08 -0.02 -1.1 -0.68 -0.31 0.04 -1.64 -0.41 -0.52 -1.12 -0.15 0.12 -0.63 -0.22 -0.59 -0.69 -0.13 -0.41 -0.21 -0.28 -0.01 -0.26 0.01 -0.07 -0.57 -0.21 0.1 0.12 -0.27 0.28 0.54 0.25 0.28 0.02 0.09 0.16 -0.07 -0.26 -1.02 0.17 0.33 -0.57 -0.56 -0.54 0.28 0.35 -0.09 0.23 -0.28 0.15 -0.93 0.21 -0.82 0.04 -0.86 0.3 -0.32 0.64 0.28 -0.03 -0.23 0.02 0.15 -0.01 0.31 0.28 -0.08 0.34 0.44 -0.04 0.25 -0.61 0.34 0.15 0.4 0.14 0.26 -0.25 0.21 0.15 0.15 0.33 -0.03 0.42 0.25 0.24 0.36 0.17 -0.1 -0.28 -0.01 0.18 0.31 0.42 -0.05 0.06 0.06 0.14 -0.54 -1.09 -1.55 -2.04 0.11 0.11 0.28 0.23 -0.14 -0.2 -0.04 0.25 -0.1 -0.44 -0.42 -0.99 0.16 0.15 0.14 0.38 -0.34 -0.23 -0.27 0.93 0.09 0.03 0.17 -0.05 0.06 -0.15 0.41 0.25 0.11 0.36 0.36 0.19 0.52 0.08 -0.48 0.08 -0.38 0.68 -0.26 0 -0.14 -0.11 -0.7 0.34 -0.12 -0.07 0.09 0 -0.2 0.04 0.44 0.06 1.22 0.66 0.28 -0.09 0.16 0 0.24 0.3 0.68 0.22 0.12 0.05 0.45 0.38 0.43 0.56 0.07 -0.15 0.06 -0.18 -0.06 -0.1 0.31 0.3 0.48 0.13 0.28 0.32 0.21 -0.04 0.24 0.95 0 0.27 0.02 -0.77 0.03 -0.34 -0.03 0.16 0.26 -0.09 -0.57 -0.07 -0.16 0.05 -0.17 1.38 0.22 0.17 0.28 0.1 0.31 -0.47 0.96 At3g25660 256728_at
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 2


Other translation factors



1.31 3.43
At3g52150 0.694
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) -1.53 0.19 0.4 1.06 -0.04 -0.54 -0.32 -0.19 -1.94 -1.07 -0.36 0.02 -2.31 -0.27 -0.86 -0.84 -0.08 -0.13 -0.69 -0.14 -0.83 -0.75 -0.01 -0.11 -0.59 -0.28 0.17 0.01 0.17 -0.27 -0.85 -0.03 0.24 0.11 -0.46 0.48 0.63 0.68 0.3 0.37 0.63 0.51 0.15 -0.2 -1.5 0.26 0.13 -0.65 -0.41 -0.41 0.23 0.48 -0.02 0.42 -0.23 0.28 -0.87 0.34 -0.82 0.12 -0.81 0.39 -0.05 0.35 0.28 0.02 -0.23 -0.16 0.13 -0.13 0.2 0.25 0.13 0.66 0.48 0.1 0.45 -0.3 0.36 0.28 0.28 -0.02 0.15 -0.2 0.16 0.56 0.49 0.45 0.09 0.45 -0.02 0.17 0.21 -0.14 -0.28 -0.2 0.18 0.48 0.35 0 -0.31 -0.21 0.22 0.28 -0.54 -1.48 -1.89 -2.14 -0.08 0.2 0.38 0.07 -0.08 0.33 0.09 0.09 0 -0.71 -0.72 -1.14 0 0.03 0.16 0.07 0.05 0.3 -0.03 0.48 0.08 -0.02 0 -0.28 0.04 -0.13 0.15 -0.22 0.31 0.51 0.55 0.2 0.55 0.07 -0.24 0.13 -0.42 0.59 0.07 0.18 -0.15 -0.08 -0.5 0.08 0.45 0.25 -0.08 -0.31 -0.5 -0.13 0.48 0.02 0.89 0.54 0.66 0.18 0.09 0.02 0.42 0.45 0.59 0.19 0.2 0.46 1.04 0.64 0.98 0.79 0.05 -0.21 -0.61 -1.17 -0.63 -0.65 0.08 -0.1 0.03 0.32 0.56 1.12 0.18 0.42 0.39 0.41 0.08 0.09 -0.18 -0.97 0.08 0.11 0.02 -0.01 0.33 -0.04 -0.53 -0.42 -2.5 1.56 1.5 1.24 0.42 -0.06 0.27 0.03 0.25 -0.92 2.97 At3g52150 252032_at
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) 4



mRNA processing in chloroplast


1.67 5.48
At2g35410 0.693
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) -1.74 0.02 -0.26 0.62 -0.02 -0.2 0.06 0.03 -1.12 -0.6 -0.22 -0.08 -1.72 -0.1 -0.64 -0.88 -0.02 -0.06 -0.53 -0.12 -0.52 -0.81 0.01 -0.24 -0.38 -0.17 0.04 -0.1 -0.12 -0.25 -0.41 -0.2 0.19 0.06 -0.5 0.06 0.22 0.28 0.11 0.17 0.3 0.25 0.06 -0.07 -0.62 0.13 -0.02 -0.3 -0.27 -0.3 -0.17 0.16 -0.23 -0.07 -0.49 -0.09 -0.99 -0.04 -0.94 -0.01 -0.84 0.24 -0.31 -0.05 0.18 -0.08 -0.03 0.01 -0.06 -0.02 0.31 -0.05 0.12 0.28 0.61 0.23 0.46 -0.53 0.19 0.31 0.32 -0.05 0.02 -0.17 0.1 0.11 0.23 0.4 -0.05 0.23 0.18 0.32 0.23 0.03 -0.14 -0.2 0.06 0.16 0.61 0.35 0.31 0.49 0.33 0.26 -0.13 -0.94 -1.28 -1.39 -0.11 -0.12 0.37 0.48 0.64 0.55 0.43 0.28 -0.18 -0.83 -0.56 -0.8 -0.14 -0.28 -0.26 0.31 0.37 0.18 0.05 0.21 0.24 0.28 0.2 -0.15 -0.17 -0.26 -0.03 -0.27 -0.18 0.4 0.6 0.4 0.07 -0.14 -0.2 0.51 -0.42 0.69 0.1 0.22 -0.23 -0.61 -0.54 0.02 -0.13 0.11 -0.26 -0.45 -0.39 -0.3 0.27 0.06 0.64 0.46 0.36 -0.04 0.12 -0.26 0.2 0.23 0.17 0.19 0.8 1.56 0.8 0.48 0.56 0.27 -0.05 0.08 0.59 0.61 0.88 0.59 0.36 -0.08 0.05 0.26 0.26 1.03 0.5 0.36 0.53 0.12 0.31 0.24 0.35 -0.42 -0.05 -0.28 0.09 -0.35 0.14 -0.04 -0.02 -0.86 -1.57 1.15 0.26 1.04 0.53 0.02 0.23 -0.34 -0.01 -1.28 0.66 At2g35410 266642_at
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) 4



mRNA processing in chloroplast


1.49 3.30
At3g08740 0.692
elongation factor P (EF-P) family protein -0.94 0.15 0.12 0.86 -0.09 -0.26 0.12 0.11 -1.37 -0.81 -0.56 0.04 -2.17 -0.48 -0.44 -0.82 -0.24 -0.03 -0.57 -0.26 -0.89 -0.65 -0.09 -0.17 -0.21 -0.12 0.31 0.04 0.12 -0.09 -0.47 -0.03 0.21 -0.04 -0.39 0.35 0.43 0.45 0.13 0.11 0.64 0.83 0.67 -0.16 -1.12 0.27 0.14 -0.86 -0.59 -0.18 0.09 0.28 -0.2 0.14 -0.55 0.18 -1.1 0.28 -0.92 0.16 -0.86 0.26 -0.15 0.71 0.23 0.04 -0.31 -0.1 0.25 0.08 0.24 0.12 0.2 0.24 0.36 0.32 0.28 -0.2 0.33 0.21 0.21 0.03 0.12 0.01 0.18 0.23 0.22 0.26 0.34 0.36 0.02 -0.02 0.1 -0.23 -0.17 -0.24 0.13 0.16 0.13 0.07 0.12 0.04 0.4 0.39 -0.14 -1.31 -1.49 -1.98 0.17 0.39 0.26 0.12 0.19 -0.28 0.27 0.19 -0.09 -0.46 -0.35 -0.67 0.22 0.09 -0.31 -0.51 -0.22 -0.36 -0.09 0.72 0.2 0.14 -0.01 -0.25 -0.04 -0.3 0.3 0.13 0.36 0.23 0.21 0.22 0.02 -0.01 -0.51 0.28 -0.39 0.32 0.16 0 -0.26 -0.28 -0.11 0.13 0.24 -0.07 -0.31 -0.1 -0.69 -0.28 -0.01 0.04 0.72 0.19 0.43 0.31 0.22 -0.2 -0.08 0.15 0.35 0.33 0.45 0.8 0.55 0.52 0.45 0.24 0.28 0.32 0.13 0.21 0.13 0.17 0.44 0.11 0.31 0.03 0.11 0.32 0.41 0.39 -0.09 0.83 0.28 0.22 0.09 -0.48 0.15 0.16 -0.28 -0.1 0.25 0.06 0.68 0.25 -1.82 0.31 -0.42 1.29 0.49 -0.02 0.89 -0.03 0.03 -0.67 0.95 At3g08740 258674_at
elongation factor P (EF-P) family protein 2


Translation factors



1.54 3.46
At5g16710 0.689
Strong similarity to dehydroascorbate reductase (Spinacia oleracea) -1.12 0.07 0.21 0.34 -0.14 -0.28 -0.13 -0.16 -0.98 -0.64 -0.09 -0.03 -1.33 -0.12 -0.24 -0.93 0.04 -0.22 -0.32 0.11 -0.46 -0.7 0.15 -0.07 -0.07 0.15 0.12 0.05 0.1 0.11 0 0.09 0.16 0.23 0.01 0.24 0.21 0.27 0.13 0.21 0.12 0.2 -0.01 -0.34 -0.86 0.16 0.04 -0.33 -0.49 -0.34 -0.05 0.21 -0.15 0.19 -0.02 -0.04 -0.52 0.13 -0.53 0.07 -0.21 0.28 -0.03 0.16 0.12 0.08 0.01 -0.17 -0.11 -0.15 0.28 0.38 0.25 0.37 0.37 0.07 0.17 -0.19 0.16 0.18 0.38 0.1 -0.09 -0.1 0.19 0.14 -0.14 0.05 0.08 0.13 -0.01 0.18 0.23 0.03 -0.23 -0.1 0.43 0.28 -0.03 0.02 0.2 0.13 -0.04 -0.02 0.18 -0.31 -0.73 -1 0.28 0.2 -0.11 -0.42 -0.15 -0.17 -0.02 0.07 0.35 -0.02 -0.42 -0.32 0.16 -0.05 -0.1 -0.28 0 -0.36 0.2 0.26 0 0.12 0.24 -0.13 -0.12 -0.16 0.13 -0.02 0.02 0 0.05 0.1 0.09 -0.06 -0.07 -0.08 -0.22 0.43 0.09 0.06 -0.25 -0.49 -0.48 0.22 0.07 -0.22 -0.2 -0.35 -0.8 -0.15 0.32 0.07 0.84 0.33 0.45 0.51 0.79 0.02 0.28 0.39 0.66 0.43 0.5 0.21 0.64 0.64 0.69 0.7 -0.03 0.13 -0.07 -0.2 -0.51 -0.44 0.19 -0.01 0.35 0.43 0.4 0.27 0.33 0.42 0.14 0.18 0.04 0.15 -0.11 -0.6 -0.19 -0.22 -0.05 0.1 0.28 -0.35 -0.33 -0.98 -1.32 1.06 -0.28 0.56 0.27 0.14 -0.06 -0.17 -0.17 -0.2 1.06 At5g16710 246454_at
Strong similarity to dehydroascorbate reductase (Spinacia oleracea) 2

ascorbate glutathione cycle Valine, leucine and isoleucine biosynthesis | Aminoacyl-tRNA biosynthesis


Glutathione S-transferase, Dehydroascorbate reductase family 1.16 2.39
At2g26930 0.688 ATCDPMEK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. -0.65 0.05 0.36 0.49 0.1 -0.12 0.11 0.03 -0.89 -0.67 -0.22 0.12 -0.86 -0.24 -0.24 -0.47 -0.08 -0.08 -0.27 -0.03 -0.27 -0.49 -0.09 0.05 0.03 0 0.28 -0.28 0.13 -0.03 -0.03 0 0.13 -0.01 -0.03 0.16 0.28 0.2 0.21 0.22 0.32 0.21 0.36 -0.02 -0.45 0.39 0.27 -0.54 -0.44 0.03 0.04 0.14 -0.13 0.1 -0.41 -0.05 -0.76 0.03 -0.89 0.09 -0.56 -0.03 -0.18 0.16 0.3 -0.22 -0.13 -0.04 -0.1 0.27 0.03 0.17 -0.03 -0.03 0.04 -0.06 0.22 -0.11 0.18 0.03 0.26 -0.06 0.2 0.02 0.16 0.09 0.02 -0.1 -0.04 0.17 0.11 0.07 0.21 -0.05 -0.04 0.12 0.2 0.11 0.02 -0.03 -0.03 0.07 0.31 0.22 -0.19 -0.88 -0.75 -0.8 0.03 0.27 -0.15 -0.24 0 0.22 0.09 0.04 0.28 -0.1 -0.07 -0.08 0.11 -0.18 0.05 0.2 -0.04 0.12 0.23 0.28 0.32 0.15 0.05 -0.19 -0.05 0.07 0.01 0.12 0.04 0.14 -0.06 0.08 0.22 -0.26 -0.01 0.03 0.25 0.4 0.19 0.01 -0.23 -0.64 -0.23 0.22 0.21 0.14 0.11 -0.08 -0.09 -0.05 0.53 0.07 0.51 0.33 0.21 0.33 0.12 -0.13 -0.03 0.31 0.21 0.25 -0.05 0.1 0.36 0.21 0.3 0.43 0.01 -0.05 -0.14 0 -0.06 0.12 0.23 0.25 0.23 0.05 0 -0.1 -0.01 0.02 0.04 0.26 0.16 -0.08 -0.17 -0.79 -0.06 0.15 -0.06 -0.22 0.03 -0.07 -0.22 -0.47 -0.5 0.3 -0.12 0.74 0.11 -0.06 0.28 -0.07 -0.07 -0.82 0.7 At2g26930 266863_at ATCDPMEK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 10


Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.98 1.64
At3g51820 0.688
chlorophyll synthetase, putative -0.61 0.1 0.22 2.5 0.17 -0.37 -0.1 -0.02 -1.42 -1.05 -0.25 0.06 -1.84 -0.17 -0.53 -1.05 -0.09 -0.36 -0.72 -0.18 -0.99 -0.85 -0.12 -0.3 -0.46 -0.06 0.13 0.01 -0.11 -0.21 -0.36 -0.02 0.27 0.07 -0.73 0.22 0.15 0.26 0.15 0.25 0.24 0.14 -0.01 -0.02 -1.09 0.2 0.32 -0.68 -0.46 -0.24 -0.03 0.2 -0.04 0.07 -0.32 0.02 -0.76 0.18 -0.71 0.22 -0.57 0.22 0.01 0.44 0.13 0 -0.33 -0.13 -0.07 -0.03 0.66 -0.06 0.07 0.44 0.39 0.62 0.23 -0.4 0.26 0.32 0.18 -0.12 -0.07 -0.3 -0.07 0.08 0.46 0.01 0.18 0.31 -0.08 0.01 0.06 -0.13 -0.24 -0.16 -0.02 0.03 0.56 -0.31 0.13 -0.14 0.18 0.31 0.26 -0.77 -0.65 -0.83 0.17 0.07 0.23 0.19 0.45 0.27 0.21 0.28 0.3 0 0.04 0.07 0.24 0.19 -0.22 -1.31 0.05 -0.07 0.4 0.61 0.19 0.25 -0.02 -0.31 -0.12 -0.11 0.64 -0.05 -0.25 0.32 -0.04 0.45 0.01 -0.11 -1.18 0.48 0.09 0.33 0.69 0.25 0.11 -0.23 -0.13 0.45 0.37 0.84 -0.05 -0.04 -0.48 -0.78 0.09 -0.19 0.49 0.28 0.41 -0.25 -0.52 -0.27 0.06 0.24 0.5 0.08 0.03 -0.19 0.34 0.35 0.61 0.14 -0.25 0.03 -0.25 -0.82 -0.36 -0.96 0.36 0.12 0.18 0.39 0.57 1.21 0.42 0.72 0.35 0.49 0.14 0.21 0.07 -0.73 -0.24 -0.17 0.24 0.2 0.17 -0.05 -0.84 -0.71 -3.64 1.61 0.73 2.81 0.42 0.15 0.92 -0.18 -0.05 -1.02 1.89 At3g51820 246308_at
chlorophyll synthetase, putative 10
biosynthesis of vitamins, cofactors, and prosthetic groups | photosynthesis | biogenesis of chloroplast chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll a biosynthesis
1.53 6.45
At4g14890 0.688
ferredoxin family protein -0.76 0.22 0.17 1.12 -0.43 -0.84 -0.41 -0.39 -2.12 -0.82 -0.68 -0.11 -2.75 -0.31 -1 -1.22 -0.34 0 -0.46 -0.51 -0.74 -0.6 0.15 -0.08 -0.25 -0.09 0.08 0.01 -0.03 -0.26 -0.35 -0.18 0.18 0.13 -0.81 0.18 0.3 0.44 0.32 0.28 0.39 0.22 0.3 -0.23 -1.14 0.28 0.03 -0.95 -0.24 -0.06 -0.06 0.13 -0.06 0.14 -0.31 -0.01 -1.22 0.08 -1.13 -0.12 -1.07 0.16 -0.04 0.28 0.27 -0.34 -0.16 -0.08 0.2 -0.41 0.85 0.14 -0.33 0.13 0.21 0.46 0.94 -0.87 0.31 0.32 0.76 0.32 0.6 -0.07 0.49 0.24 0.01 0.35 0.41 0.99 0.49 0.36 0.51 0.37 -0.23 -0.33 0.23 0.26 0.32 0.08 0.13 0.28 0.48 0.16 -0.69 -0.83 -1.35 -2.25 -0.32 -0.27 -0.2 -0.2 0.01 0 0.19 0.34 -0.03 -0.4 -0.43 -1.13 -0.23 -0.14 -0.39 -0.8 0.06 0.87 0.19 0.28 0.17 0.08 0.21 0.11 0.24 -0.13 0.74 0.13 0.19 0.36 -0.02 0.28 0.74 -0.83 0.03 0.31 -0.59 0.85 0 0.4 -0.02 -0.48 -1.12 0.46 0.92 -0.14 0.12 -0.07 -0.13 -1.23 -0.06 0.19 0.65 0.8 0.68 0.46 0.67 0.5 0.35 0.18 0.78 0.13 0 0.33 0.66 0.52 0.36 1.12 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.49 0.2 0.64 0.08 0.56 0.45 0.56 0.72 0.53 0.77 0.53 -0.38 -1.33 -0.02 -0.31 0.33 -0.03 0.12 -0.28 -0.93 -0.92 -2.65 2.12 1.21 0.95 0.53 -0.2 0.42 0.39 0.35 -2.91 2.67 At4g14890 245347_at
ferredoxin family protein 2
transported compounds (substrates) | electron / hydrogen transport | transport facilitation
Photosynthesis Photosystems | Ferredoxin


1.99 5.58
At2g43030 0.686
ribosomal protein L3 family protein -0.73 0.19 0.11 -0.02 -0.2 -0.79 -0.19 -0.3 -1.8 -0.99 -0.28 0.13 -2.99 -0.31 -0.72 -1.51 -0.02 0 -0.85 -0.26 -0.86 -1.03 0.06 -0.03 -0.41 -0.23 0.13 -0.02 0.06 -0.27 -0.61 -0.27 0.36 0.02 -0.45 0.28 0.38 0.4 0.17 0.25 0.39 0.23 -0.15 -0.25 -1.45 0.03 0.09 -0.38 -0.36 -0.35 0.09 0.3 -0.1 0.18 -0.35 0.12 -0.95 0.21 -0.77 0.05 -0.7 0.19 -0.08 0.15 0.28 -0.17 -0.25 -0.17 0.06 0.14 0.66 0.16 0.17 0.61 0.45 0.34 0.49 -0.26 0.37 0.23 0.28 0.05 0.16 0.07 0.16 0.22 0.52 0.37 0.05 0.5 0.25 0.09 -0.01 -0.02 -0.15 0 0.18 0.28 0.55 0.01 -0.13 -0.06 0.27 0.2 -0.46 -1.11 -1.44 -1.48 -0.12 0 0.3 -0.06 0.02 -0.04 0.39 0.28 -0.03 -0.5 -0.44 -0.77 0.24 0.16 0.22 -0.46 -0.42 -0.21 0.09 0.42 0.21 0.04 -0.05 -0.24 -0.08 0.28 0.73 -0.12 -0.02 0.2 0 0.15 0.49 -0.02 -0.22 0.01 0.03 0.39 0.28 -0.08 -0.22 -0.05 0.11 0.38 0.11 0.41 -0.05 -0.12 -0.72 -0.08 0.41 0.33 0.42 0.43 0.52 0.19 -0.01 -0.07 0.07 0.43 0.73 0.12 0.48 1.08 0.55 0.59 0.28 0.64 0.45 0.17 0.08 0.18 0.07 -0.12 0.21 0.21 0.56 0.33 0.1 0.86 0.44 0.39 0.38 0.44 0.2 0.18 -0.21 -0.68 0.04 0.22 0.05 0.07 0.38 -0.12 -0.3 -0.51 -3.56 1.25 0.45 1.45 0.27 0.05 0.14 0.03 0 -0.99 3.83 At2g43030 265247_at
ribosomal protein L3 family protein 2


Ribosome



1.54 7.39
At3g18680 0.684
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) -0.63 0.23 0.24 0.51 0.09 -0.1 0.2 -0.19 -1.29 -0.82 -0.61 0.08 -2.69 -0.62 -0.66 -0.84 -0.54 -0.06 -0.63 -0.43 -0.71 -0.46 -0.19 -0.04 -0.35 0.1 0.36 0.08 0.25 -0.05 0.03 0.3 0.43 0.02 -0.41 0.48 0.33 0.41 0.35 0.35 0.39 0.31 0.22 -0.19 -0.84 0.48 0.25 -0.83 -0.68 -0.04 0.03 0.31 -0.28 0.1 -0.56 0.15 -1.32 0.18 -1.28 0.05 -1.08 0.43 -0.38 0.43 0.45 0 -0.01 0.04 0.22 0.21 0.26 0.13 0.03 0.19 0.02 0.12 0.25 -0.7 0.62 0.2 0.63 -0.02 0 -0.06 0.25 -0.02 0.06 0.08 0.09 0.5 0.36 0.28 0.5 0.06 -0.4 -0.04 0.33 0.17 0.35 0.12 0.06 -0.08 0.57 0.49 -0.56 -1.79 -1.68 -1.37 0.37 0.02 0.13 -0.08 0.21 0.2 0.47 0.44 -0.03 -0.75 -0.41 -0.55 0.24 -0.07 0.1 0.04 -0.24 0.04 0.1 0.52 0.33 0.28 0.23 -0.15 -0.13 0.01 0.36 0.12 0.01 0.25 0.12 0.17 0.25 -0.12 -0.17 -0.05 0.02 0.64 0.64 -0.19 -1.06 -0.87 -0.55 0.15 0.19 0.23 -0.15 0.07 0.22 -0.46 0.84 0.27 0.91 0.66 0.45 -0.2 0.34 0.23 0.22 0.45 0.5 0.25 -0.18 0.09 0.06 0.17 0.33 0.38 0.09 0.08 0.08 0.17 -0.01 -0.25 0.51 0.3 0.31 0.28 -0.04 0.49 -0.12 -0.02 0.33 0.36 0.2 0.08 -0.45 -1.36 0.26 0.4 0.08 0.09 0.09 0.42 -0.59 0.32 -0.87 -0.81 -0.44 2.02 0.33 0.36 0.24 0.32 -0.09 -0.83 1.41 At3g18680 257756_at
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) 2

proline biosynthesis I | biosynthesis of pyrimidine ribonucleotides




1.39 4.71
At4g25080 0.684
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 1 0.32 0.39 0.13 -0.27 -0.87 -0.28 -0.43 -1.83 -1.24 -0.49 0.07 -2.83 -0.37 -0.84 -1.21 -0.37 0.06 -0.89 -0.48 -0.78 -1.22 0.04 -0.25 -0.56 -0.22 0.15 0.01 -0.01 -0.43 -0.48 -0.12 -0.08 0.12 -0.79 0.28 0.42 0.39 0.18 0.32 0.41 0.34 -0.16 -0.33 -1.67 0.15 0.3 -0.85 -0.46 -0.38 0.11 0.42 -0.25 0.27 -0.42 0.11 -1.17 0.2 -1.12 0.08 -1.02 0.42 -0.27 0.28 0.11 -0.18 -0.26 -0.07 0.25 0.36 0.96 0.37 0.27 0.68 0.76 0.71 0.41 -0.77 0.27 0.28 0.51 0.32 0.39 -0.09 0.14 0.26 0.65 0.44 0.36 0.43 0.65 0.47 0.52 0.42 0.15 -0.14 0.27 0.4 0.65 0.14 0.02 -0.16 0.28 0.15 -0.65 -1.21 -2.04 -3.03 0.01 0.15 0.2 -0.16 0.45 -0.16 0.4 0.44 0.04 -0.39 -0.53 -1.13 0.47 0.22 -0.18 -0.75 -0.15 -0.16 0.12 0.28 0.24 0.41 0.28 0.23 0.19 0.23 0.89 -0.15 0.13 0.45 0.03 0.23 0.12 -0.31 0.57 0.02 -1.44 0.46 0.42 0.15 0.33 0.13 -0.87 0.23 0.6 0.48 0.22 0.01 -0.88 -0.09 0.59 0.2 0.47 0.37 0.48 0.41 0.54 0.04 0.3 0.32 0.89 0.27 0.93 1.04 0.97 0.13 0.53 0.18 0.41 0.31 0.57 0.03 0.27 0.07 0.15 0.25 0.61 0.08 -0.01 0.56 0.56 0.51 0.4 0.3 0.05 0.13 -0.41 -0.9 -0.26 -0.23 -0.3 0.16 0.43 -0.26 -1.01 -1.24 -1.55 1.74 0.7 0.96 0.45 0.07 0.12 -0.6 0.11 -2.02 1.61 At4g25080 254105_at
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 9 magnesium protoporphyrin IX methyltransferase activity | chlorophyll biosynthesis secondary metabolism
Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.94 4.76
At3g54210 0.683
ribosomal protein L17 family protein -0.82 0.11 0.1 0.83 -0.07 -0.68 -0.14 -0.19 -1.22 -0.56 -0.32 -0.05 -1.73 -0.1 -0.61 -0.79 0.06 0.04 -0.43 -0.06 -0.71 -0.61 -0.12 0.03 -0.37 -0.26 0.03 -0.07 -0.02 -0.14 -0.5 -0.17 0.23 0.05 -0.24 0.28 0.33 0.42 0.24 0.23 0.34 0.41 -0.05 -0.27 -1.26 0.12 0.09 -0.46 -0.43 -0.44 -0.06 0.36 -0.04 0.22 -0.19 0.09 -0.79 0.31 -0.63 0.11 -0.53 0.28 -0.06 0.31 0.14 -0.06 -0.27 -0.25 0.17 0.17 0.06 0.1 0.22 0.3 0.42 0.31 0.23 -0.18 0.24 0.22 0.24 -0.05 0.1 -0.06 -0.04 0.31 0.19 0.33 0.08 0.33 0.19 0.13 0.2 0.04 -0.05 -0.04 0.23 0.36 -0.1 0.27 0.19 0.01 0.07 0.09 0.01 -0.82 -1.12 -1.35 -0.12 -0.03 0.21 0.21 0.17 0.02 0.36 0.18 0.05 -0.42 -0.43 -0.75 0.16 0.17 -0.27 -0.8 -0.47 -0.26 -0.04 0.56 0.08 0 -0.03 -0.14 0.02 0.06 0.34 -0.13 0.17 0.18 0.22 0.05 0.26 -0.08 -0.26 0.14 -0.45 0.37 0.14 0 -0.22 -0.27 -0.21 0.33 0.27 0.09 -0.25 -0.44 -0.41 0.03 0.35 0.39 0.65 0.21 0.39 0.48 0.37 -0.15 0.09 0.31 0.63 0.15 0.6 0.88 0.8 0.31 0.6 0.56 0.01 0.02 0.03 0.18 -0.05 -0.23 0.14 -0.05 0.41 0.46 0.27 0.61 0.35 0.44 0.34 0.46 0.12 0.34 0.03 -0.59 -0.17 0 0.13 0.09 0.28 -0.31 -0.18 -0.62 -3.47 1.17 0.09 1.45 0.18 -0.08 -0.05 -0.08 -0.09 -0.33 1.71 At3g54210 251883_at
ribosomal protein L17 family protein 2
protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



1.34 5.17
At5g11450 0.683
oxygen-evolving complex-related, 23 kDa polypeptide of water-oxidizing complex of photosystem II -0.5 -0.01 0.31 1.34 0.04 0.06 0.06 -0.01 -1.68 -1.24 -0.35 0.11 -2.22 -0.35 -0.72 -1.13 -0.25 -0.47 -0.77 -0.15 -1.12 -0.82 -0.08 -0.15 -0.66 -0.14 0.35 0.04 0.02 -0.5 -0.63 0.02 0.01 0.09 -0.19 0.17 0.33 0.36 0.2 0.24 0.56 0.45 0.4 -0.09 -0.91 0.22 0.77 -0.92 -0.8 -0.38 -0.09 0.3 -0.21 0.14 -0.54 0.28 -1.19 0.23 -1.07 0.23 -0.96 0.4 -0.3 0.41 0.25 -0.01 -0.28 -0.17 0.1 -0.14 0.38 0.07 0.02 0.1 0.22 0.12 0.19 -0.46 0.56 0.35 0.5 0.02 0.38 0.16 0.21 0.05 0.34 0.31 0.15 0.25 0.28 0.21 0.4 0.03 0 -0.07 0 0.12 0.36 0.34 0.16 0.19 0.47 0.38 -0.35 -1.6 -1.53 -1.54 0.16 0.17 0.1 0.2 -0.1 0.16 0.45 0.31 -0.21 -0.89 -0.44 -0.42 0.38 -0.01 -0.31 -0.31 -0.31 0.09 0.15 0.49 0.43 0.26 0.01 -0.42 -0.1 -0.08 0.32 0.33 0.22 0.31 0.34 0.22 0.45 -0.12 -1.18 0.27 0.33 0.39 0.35 0.12 -0.28 -0.24 0.08 0.32 0.32 0.23 0.07 -0.15 -0.07 -0.92 0.49 0.16 0.41 0.63 0.28 -0.52 -0.54 -0.15 0.32 0.31 0.38 0.21 0.08 0.39 -0.09 0.53 0.39 0.41 0.01 -0.11 -0.46 0.66 0.71 1.12 1.5 1.02 0.12 0.14 0.13 0.4 0.28 0.2 0.27 0.55 0.37 0.33 -0.08 -1.09 0.04 0.16 0.07 -0.08 0.14 -0.06 -0.61 -0.13 -1.52 0.97 -0.05 0.72 0.13 0.22 0.46 -0.49 0.05 -0.69 1.46 At5g11450 250371_at
oxygen-evolving complex-related, 23 kDa polypeptide of water-oxidizing complex of photosystem II 6
photosynthesis

Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.69 3.72
At4g17600 0.677 LIL3:1 lil3 protein -1.66 0.07 0.28 4.26 -0.56 -0.95 -0.46 -0.38 -1.62 -0.96 -0.53 0.07 -2.27 -0.27 -0.78 -1.03 -0.21 -0.02 -0.73 -0.46 -0.73 -0.94 -0.03 -0.18 -0.43 -0.22 0.19 -0.01 0.07 -0.12 -0.83 -0.03 0.25 0.05 -0.52 0.23 0.32 0.42 0.31 0.25 0.48 0.38 0.04 -0.2 -1.31 0.44 0.46 -0.72 -0.34 -0.47 0.07 0.46 -0.02 0.24 -0.32 -0.08 -1.09 0.11 -1 0.07 -0.69 0.32 -0.1 0.36 0.06 -0.16 -0.47 0.2 0.16 -0.26 0.1 0.28 0.25 0.04 0.47 -0.17 0.27 -0.66 0.28 0.19 0.15 0.21 -0.01 -0.23 0.22 0.39 0.08 0 0.06 -0.08 0.12 0.22 0.32 0.31 0.2 -0.07 0.69 0.47 0.44 0.56 0.1 0.47 0.13 0.26 -0.15 -0.81 -1.32 -2.02 0.48 0.26 0.1 0.45 0.08 0.63 0.16 0.33 0.13 -0.05 -0.15 -0.35 0.67 0.31 -0.68 -0.02 -0.57 -0.1 0.34 0.64 0.09 0.14 -0.1 0.26 0.33 0.04 0.17 0.41 0.64 0.25 0.3 0.05 0.28 -0.12 -0.23 0.09 -0.12 0.06 -0.18 0.15 0.13 -0.25 -0.67 0.5 0.95 0.06 0.21 -0.94 -0.89 -0.5 0.28 0.23 0.14 0.16 0.15 -0.7 -0.52 0.18 0.04 -0.32 0.45 0.38 0.46 -0.52 0.28 0.33 0.2 0.49 0.17 0.56 0.33 0.86 1.17 0.08 0.24 0.36 0.25 0.98 0.54 0.66 0.48 0.27 0.1 0.32 0.31 0.19 -0.08 -1.15 0.06 -0.07 -0.14 0.28 0.16 -0.09 -0.56 -0.57 -4.51 1.43 0.51 1.23 0.33 0.16 -0.38 0.21 0.18 -1.2 2.6 At4g17600 245354_at LIL3:1 lil3 protein 8 regulation of transcription


Photosystems | additional photosystem II components | Early light-inducible proteins


1.65 8.77
At3g48730 0.676
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) -0.81 NA 0.46 1.41 -0.06 -0.31 -0.1 0.03 -1.9 -0.92 -0.36 -0.12 -2.7 -0.31 -0.73 -1.11 -0.11 0.06 -0.68 -0.31 -0.75 -0.76 0.05 -0.1 -0.62 -0.23 0.31 0.08 0.04 -0.3 -0.45 0.15 0.51 -0.02 -0.39 0.48 0.46 0.42 0.24 0.36 0.65 0.45 0.44 -0.09 -1.02 0.25 0.26 -0.53 -0.49 -0.13 0.18 0.45 -0.09 0.17 -0.27 0.28 -0.87 0.41 -0.74 0.15 -0.76 0.46 -0.16 0.54 0.38 -0.06 -0.22 -0.24 0.15 0 0.21 0.38 0.24 0.38 0.21 0.14 0.39 -0.48 0.61 0.37 0.66 0.32 0.3 0.14 0.46 0.38 0.19 0.02 0.15 0.07 0.48 0.51 0.57 0.12 0.1 0.02 0.25 0.31 0.31 0.16 -0.02 0.32 0.4 0.49 -0.14 -1.3 -1.73 -2.06 0.51 0.15 0 -0.27 -0.39 -0.34 0.3 0.31 0 -0.87 -0.69 -0.79 0.31 0.23 -0.21 -0.74 -0.6 -0.38 -0.37 0.64 0.46 0.37 0.34 -0.12 0.17 0.15 0.2 0.48 0.27 0.36 0.13 0.26 0.59 -0.13 -0.61 0.05 -0.19 0.27 0.18 -0.09 -0.37 -0.46 -0.21 0.22 0.27 0.21 0.05 -0.24 -0.03 -0.43 0.28 0.38 0.49 0.51 0.54 0.21 -0.35 -0.14 0.07 0.08 -0.02 0.43 -0.21 -0.49 -0.55 0.45 -0.18 0.11 0.24 0.23 -0.01 -0.23 0.17 0.35 0.38 0.56 0.12 0.56 0.46 0.61 -0.01 0.09 -0.06 0.47 0.21 0.17 -0.12 -1.03 0.15 0.21 0.01 0.08 0.27 0.22 -0.45 -0.41 -2.39 1.21 0.3 1.32 -0.01 -0.03 0.38 0.28 -0.09 -0.73 1.55 At3g48730 252318_at
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) 6 porphyrin biosynthesis secondary metabolism | biogenesis of chloroplast chlorophyll biosynthesis | biosynthesis of proto- and siroheme | biotin biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | glutamate degradation I Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
1.44 4.25
At3g49470 0.675
nascent polypeptide-associated complex (NAC) domain-containing protein 0.37 0.19 0.32 0.75 -0.38 -0.98 -0.28 -0.28 -1.56 -0.79 -0.57 -0.09 -1.59 -0.35 -0.78 -0.7 -0.31 0.13 -0.56 -0.5 -0.52 -0.62 0.11 -0.14 -0.23 0 0.12 0.2 0 -0.14 -0.18 0.09 0.18 0.08 -0.76 0.27 0.38 0.4 0.12 0.32 0.48 0.41 0.23 -0.14 -0.99 0.14 0.18 -0.66 -0.22 -0.19 0.08 0.27 0.19 0.09 -0.17 -0.06 -1 0.01 -1.03 -0.13 -0.94 0.18 0.03 0.4 0.12 -0.17 -0.19 0.18 0.09 0.21 0.37 0.14 0.07 0.2 0.14 -0.22 0.13 -0.75 0.18 0.2 0.18 0.23 0.11 0.03 0.22 0.21 0.34 0.13 -0.11 0.31 0.21 0.12 0.11 0.21 -0.09 -0.11 0.22 0.15 0.38 -0.02 -0.33 -0.28 0.23 0.15 -0.56 -0.68 -1.24 -1.64 0.41 0.12 0.13 -0.11 -0.37 -0.32 0.38 0.3 -0.18 -0.03 -0.24 -0.37 0.32 -0.12 -0.78 -1.1 -0.75 -0.52 0.16 0.51 0.16 0.22 -0.12 0.1 -0.03 -0.11 0.51 0.32 0.09 0.28 0.25 0.15 0.44 -0.24 -0.64 0.14 0.03 0.39 0.34 0.18 0.19 -0.19 -0.47 0.37 0.17 0.41 0.05 0.12 -0.05 -0.28 0.1 0.43 0.57 0.2 0.16 0.41 0.4 0.28 0.17 0.32 0.54 0.41 0.39 0.66 0.14 0.39 0.32 0.56 0.09 0.17 0.21 -0.55 -0.49 -0.48 0.41 0.27 0.4 0.54 0.25 0.5 0.18 0.19 0.27 0.43 0.26 0.49 -0.27 -0.66 0.21 0.01 -0.25 -0.04 0.14 -0.12 -0.73 0.21 -0.85 0.7 0.23 1.26 0.07 0.28 0.37 0.28 0.06 -1.47 2.72 At3g49470 252277_at
nascent polypeptide-associated complex (NAC) domain-containing protein 2
protein synthesis | translational control
Transcription | Basal transcription factors



1.38 4.36
At5g52440 0.675 HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB -0.59 0.38 0.3 0.3 -0.82 -1.19 -1.19 -1.19 -1.37 -0.98 -0.34 0.14 -1.31 -0.39 -0.83 -0.98 -0.4 0.11 -0.55 -0.37 -1.03 -0.71 0.07 -0.05 -0.49 -0.04 0.18 0.21 0.03 -0.33 -0.15 0.02 0.19 0.24 -0.34 0.46 0.41 0.64 0.22 0.24 0.22 0.49 0.26 -0.33 -1.12 0.15 0.07 -0.64 -0.15 -0.31 0.16 0.42 0.08 0.39 -0.13 0.49 -0.83 0.38 -1 0.16 -0.67 0.34 -0.07 0.25 -0.04 -0.04 0.25 0.04 0.31 -0.23 0.34 0.35 -0.08 0.02 0.54 0.65 0.31 -0.65 0.15 0.2 0.19 0 0.1 -0.44 0.09 0.07 0.28 0.44 0.3 0.23 0.16 0.03 0.38 0.05 -0.11 -0.02 0.45 0.37 0.15 0.46 0.26 0.13 0.24 0.11 -0.56 -0.56 -1.08 -1.17 -0.35 -0.11 0.39 0.34 0.81 0.56 0.13 0.34 0.06 -0.18 -0.5 -0.63 0.47 -0.16 -0.14 -0.21 0.19 0.13 0.17 0.65 -0.19 -0.05 -0.03 0.01 0.22 0.04 0.65 -0.28 -0.17 0.17 0.5 0.48 0.16 -0.31 0.21 -0.09 -0.6 0.27 0.52 -0.1 -0.32 -0.39 -1.04 0.49 0.49 0.4 0.51 0.17 -0.44 -0.74 -0.36 0.02 0.76 0.46 0.34 0.31 0.75 0.25 0.4 0.11 0.53 -0.02 -0.04 -0.17 0.6 0.39 0.64 0.31 0.03 -0.37 0.1 -0.35 -0.27 0.28 0.51 0.53 0.11 0.16 0.12 0.34 0.46 0.39 0.16 0.49 -0.06 0.11 -0.4 -1.01 -0.05 0.04 0.14 0.47 0.04 -0.01 -0.07 -0.46 -2.91 0.74 0.15 1.67 0.37 0.18 0.3 -0.08 0.3 -0.9 1.2 At5g52440 248338_at HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB 10 chloroplast thylakoid membrane protein import | delta-pH-dependent transporter activity


Pathway for nuclear-encoded, thylakoid-localized proteins | Delta-pH pathway


1.63 4.58
At3g26570 0.673 PHT2;1 low affinity phosphate transporter -1.19 -0.11 0.26 1.09 -0.18 -0.06 0.02 -0.12 -1.41 -0.41 -0.28 -0.09 -1.24 -0.41 -0.72 -0.67 -0.16 -0.24 -0.52 -0.23 -0.41 -0.73 0.07 -0.28 -0.34 0.01 0.32 0.15 -0.19 -0.37 -0.56 -0.08 0.13 -0.03 -0.95 0.01 -0.04 0.01 -0.09 0.06 -0.1 0.03 0.12 -0.19 -1.35 0.19 -0.27 -0.93 -0.08 -0.02 0.01 0.3 -0.03 0.15 -0.26 -0.06 -1.18 0.01 -1.06 -0.1 -0.91 0.28 -0.17 0.12 0.14 0.13 0.06 -0.03 0.13 0.27 0.85 0.75 0.17 0.53 -0.05 0.66 0.54 -0.8 0.25 0.43 0.34 0.36 0.25 0.04 0.62 -0.07 0.52 -0.71 0.21 0.01 0.2 0.18 0.49 0.38 0.16 0.21 0.61 0.11 0.86 0.08 0.54 0.63 0.27 0.11 -0.51 -0.57 -1.26 -0.96 0.14 -0.87 0.28 -0.35 0.7 0.34 0.33 0.32 -0.11 0.1 -0.5 -0.42 0.4 -0.54 -0.21 0.25 0.27 0.6 0.03 0.69 0.46 0.42 0.48 0.18 0.06 0.24 0.43 0.35 -0.37 0.53 -0.16 0.83 0.48 -0.2 -0.28 0.55 -0.34 0.53 0.68 0.8 1.45 0.37 -0.88 1.01 0.35 1.45 0.57 0.13 -0.59 -0.39 0.26 -0.39 0.15 0.42 -0.06 -0.35 -0.61 0.05 0.13 0.15 0.59 -0.06 -0.94 0.61 -0.38 -0.49 -0.33 0.08 0.18 0.01 -0.53 -0.04 -0.15 0.17 0.09 -0.22 0.03 0.98 -0.15 0.89 -0.41 0.45 0.19 0.28 0.18 0.14 0.12 0 -0.13 0.07 -0.93 0.04 -0.39 0.28 -1.2 -0.08 -2.52 0.6 -0.48 1.79 0.38 -0.3 -0.34 0.16 -0.08 -2.06 1.92 At3g26570 257311_at PHT2;1 low affinity phosphate transporter 9 low affinity phosphate transporter activity | phosphate transport

Membrane Transport | Other ion-coupled transporters



1.76 4.44
At3g25920 0.671 RPL15 50S ribosomal protein L15, chloroplast (CL15) -0.84 0.15 0.36 0.28 -0.01 -0.3 0.08 -0.11 -1.49 -0.84 -0.15 0.25 -2.77 -0.18 -0.36 -1.07 0.2 -0.03 -0.79 -0.11 -0.56 -1.11 0.01 -0.04 -0.47 -0.36 0.21 0 0 -0.21 -0.62 -0.22 0.25 0.09 -0.11 0.32 0.45 0.4 0.11 0.21 0.68 0.46 -0.06 -0.35 -1.44 0.18 0.37 -0.54 -0.55 -0.46 0.1 0.31 -0.11 0.24 -0.38 0.19 -0.76 0.25 -0.66 0.16 -0.61 0.23 -0.02 0.38 0.35 -0.04 -0.24 -0.1 -0.05 0.1 0.12 0.14 0.02 0.19 0.36 0.09 0.25 -0.28 0.35 0.12 0.07 -0.09 -0.21 -0.34 0.18 -0.08 0.1 0.28 0.08 0.2 0.28 -0.03 0.12 0.15 -0.09 -0.23 0.21 0.26 0.93 0.69 0.44 0.46 0.32 0.42 -0.02 -0.43 -1.43 -2.15 0.38 0.1 0.34 0.33 0.33 -0.04 0.32 0.35 0.16 -0.32 -0.37 -0.75 0.59 0.27 0.15 0.36 -0.09 -0.18 0 0.36 0.15 -0.02 -0.08 -0.18 -0.2 -0.33 0.22 0.15 0.18 0.16 0.19 0.05 0.02 0.04 -0.36 -0.03 -0.18 0.26 0.24 -0.08 -0.17 -0.47 0.17 0.22 0.12 0.31 0.17 -0.17 -0.43 -0.13 0.11 0.35 0.46 0.14 0.19 0.09 -0.05 -0.34 -0.25 0.05 0.27 0.19 0.03 0.44 0.1 0.3 0.24 0.23 0.17 0.1 -0.18 -0.32 -0.28 -0.14 0.43 0.32 0.21 0.42 0 0.51 0.28 0.32 0.14 0.59 0.5 0.06 0.18 -0.59 -0.21 0 -0.1 0 0.33 -0.12 -0.05 -0.47 -2.15 1.48 1.19 1.02 0.41 0.14 0.5 -0.05 -0.05 -0.47 1.51 At3g25920 258076_at RPL15 50S ribosomal protein L15, chloroplast (CL15) 6 protein biosynthesis | protein biosynthesis | plastid large ribosomal subunit

Ribosome



1.27 4.28
At4g31850 0.671 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs -0.84 0.24 0.25 -0.4 -0.22 -0.68 -0.41 -0.42 -1.5 -0.82 -0.57 -0.09 -1.79 -0.61 -0.96 -1.3 -0.44 0.06 -0.55 -0.37 -0.83 -0.78 -0.04 -0.24 -0.62 -0.07 0.14 0.05 -0.01 -0.51 -0.41 0.16 0.07 -0.09 -0.34 0.28 0.22 0.14 0.05 0.33 0.24 -0.01 -0.34 -0.32 -1.02 -0.13 -0.66 -0.89 -0.57 -0.45 -0.04 0.48 0.08 0.23 -0.14 -0.04 -1.22 -0.01 -1.09 0.12 -0.92 0.49 -0.12 0.01 0.2 -0.24 -0.09 0.25 -0.04 0.1 0.2 0.43 0.47 0.36 0.19 0.15 0.56 -1.34 0.3 0.34 0.2 0.16 -0.1 -0.57 0.52 0.21 0.37 0.22 0.35 0.54 0.41 0.01 0.45 0.32 -0.34 -0.18 0.22 -0.14 0.56 0.47 0.3 0.19 0.26 0.21 -0.77 -0.79 -1.92 -1.41 0.78 0.65 0.4 0.56 0.47 0.66 0.33 0.2 -0.15 -0.59 -0.93 -0.98 0.47 0.42 -0.19 0.04 0.61 0.02 0.02 0.53 -0.01 -0.07 -0.1 0.17 -0.14 0.02 -0.15 0.02 0.11 0.13 0.35 0.66 0.43 -0.63 -1.19 0.34 0.06 0.53 0.25 0.16 -0.12 -0.3 -0.1 0.56 0.59 0.65 0.6 0.63 0.56 -0.89 -0.22 0.05 0.53 0.49 -0.25 -0.76 0.55 0.67 0.31 0.14 0.17 0.64 -0.22 0.52 -0.07 0.69 0.57 0.65 -0.23 0.48 0.84 0.6 0.44 0.3 0.09 0.26 0.2 0.56 0.35 0.52 0.38 0.6 0.55 0.6 0.44 0.39 -0.09 -0.87 -0.37 -0.1 0.16 0.09 0.19 0.43 -1 -0.35 -2.29 0.65 0.75 2 0.19 0.04 0.42 0.28 0.83 -1.11 0.54 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


1.69 4.31
At2g33800 0.670
ribosomal protein S5 family protein -0.76 0.11 0.25 0.34 -0.02 -0.34 -0.02 -0.14 -1.72 -1.2 -0.3 -0.14 -2.42 -0.25 -0.49 -1.1 -0.19 -0.04 -0.72 -0.31 -0.89 -0.83 -0.07 -0.06 -0.48 -0.42 0.08 -0.12 0.2 -0.25 -0.69 -0.14 0.21 0.06 -0.13 0.31 0.46 0.41 0.27 0.19 0.43 0.32 0.02 -0.4 -1.4 0.21 0.16 -0.62 -0.55 -0.37 0.06 0.39 -0.23 0.42 -0.24 0.25 -0.83 0.39 -0.56 0.28 -0.66 0.32 -0.09 0.44 0.33 0.06 -0.28 -0.09 0.12 0.12 0.32 -0.05 0.09 0.37 0.37 0.15 0.28 -0.36 0.41 0.22 0.23 0.05 0.04 -0.01 -0.06 0.07 0.28 0.21 -0.09 0.44 0.5 0.24 0.28 0.23 -0.02 0.01 0.02 0.09 0.37 0.12 -0.01 0.07 0.24 0.26 -0.11 -0.66 -0.99 -1.35 0.04 0.1 0.42 0.22 0.34 0.15 0.42 0.32 0.05 -0.41 -0.37 -0.77 0.21 0.12 -0.24 -0.49 -0.31 -0.28 0.02 0.51 0.21 0.12 0.05 -0.05 0.04 0.19 0.34 -0.05 0.12 0.4 0.1 0.03 0.26 -0.03 -0.1 -0.07 -0.24 0.42 0.13 -0.07 -0.28 -0.35 0.2 0.13 0.16 0.18 -0.17 -0.1 -0.35 0.02 0.13 0.22 0.6 0.26 0.37 0.44 0.37 -0.02 0.05 0.26 0.67 0.25 0.28 0.49 0.46 0.35 0.17 0.37 0.02 -0.1 -0.12 -0.17 -0.1 -0.41 0.31 0.53 0.3 0.19 0.09 0.62 0.26 0.28 0.35 0.48 0.27 0.35 0.01 -0.6 -0.04 0.19 0.07 0.08 0.3 -0.11 -0.43 -0.74 -2.67 1.75 0.41 0.68 0.21 0.43 0.11 -0.19 0.15 -0.34 1.6 At2g33800 267435_at
ribosomal protein S5 family protein 2


Ribosome



1.25 4.42
At5g14320 0.670 CS13 30S ribosomal protein S13, chloroplast (CS13) -1.29 0.18 0.17 0.32 -0.12 -0.56 -0.2 -0.24 -1.56 -0.96 -0.19 -0.12 -2.16 -0.31 -0.48 -1.07 -0.02 0.04 -0.68 -0.08 -0.89 -0.8 -0.21 -0.02 -0.44 -0.18 0.17 -0.13 0.03 -0.25 -0.47 -0.12 0.06 0.04 -0.07 0.28 0.43 0.49 0.2 0.07 0.39 0.12 -0.21 -0.25 -1.31 0.07 0.12 -0.28 -0.47 -0.37 0 0.25 0.03 0.22 -0.24 0.17 -0.7 0.2 -0.68 0.14 -0.54 0.22 0.04 0.35 0.22 -0.11 -0.37 -0.08 0.12 0.15 0.5 0.21 0.04 0.37 0.41 0.36 0.08 -0.3 0.4 0.14 0.35 0.36 0.42 0.19 0.39 0.26 0.3 0.27 0.37 0.53 0.28 0.16 0.05 0.21 0.07 0.09 0.38 0.33 0.38 0.27 0.11 -0.26 0.13 0.12 -0.11 -0.39 -1.04 -1.21 0.03 0.05 0.4 0.31 0.38 -0.19 0.28 0.2 0.1 -0.25 -0.31 -0.55 0.24 0.08 -0.49 -1.01 -0.23 -0.47 -0.09 0.66 0.21 0.05 -0.03 0.15 0.14 0.27 0.45 0.06 0.16 0.23 0.24 0.33 0.18 0.14 -0.08 -0.23 -0.34 0.3 0.04 -0.11 -0.24 -0.19 0.08 0.16 0.26 0.27 -0.09 0.03 -0.77 0.15 0.35 0.23 0.54 0.33 0.42 0.42 0.12 -0.13 -0.07 0.12 0.59 0.13 0.27 0.52 0.31 0.17 0.37 0.18 0 0.02 -0.13 -0.73 -0.43 -0.54 0.17 0.09 0.39 0.49 0.25 0.82 0.09 0.44 0.27 0.53 0.17 0.27 -0.11 -0.56 -0.01 0.16 0.14 0.03 0.44 -0.48 -0.21 -0.53 -2.73 1.71 -0.36 0.78 0.01 0.15 0.37 -0.01 0.18 -0.14 1.89 At5g14320 250190_at CS13 30S ribosomal protein S13, chloroplast (CS13) 6
protein synthesis | ribosome biogenesis
Ribosome



1.33 4.62
At3g15850 0.669 FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. -0.13 0.37 0.03 1.36 -0.71 -0.98 -0.4 -0.52 -1.65 -0.88 -0.54 0.21 -2.33 -0.34 -1.11 -0.87 0.14 0.23 -0.62 -0.57 -1.03 -0.96 -0.03 -0.4 -0.85 -0.41 0.23 0.31 0.04 -0.92 -1.08 -0.23 -0.15 -0.01 -0.95 0.21 0.35 0.34 0.08 0.28 0.56 0.56 0.49 -0.26 -2.5 0.16 -0.5 -0.96 -0.49 -0.47 0.06 0.57 0.11 0.19 -0.22 -0.09 -1.24 -0.03 -1.15 -0.1 -0.89 0.38 0.09 0.23 0.22 0.03 0.33 0.56 0.59 0.94 0.26 0.12 0.45 0.55 0.48 0.24 0.35 -1.25 0.22 0.22 -0.05 -0.08 -0.09 -0.18 0.1 0.21 0.42 0.22 0.25 0.38 -0.05 -0.07 0.14 -0.02 -0.45 -0.08 0.3 0.43 0.7 0.32 0.33 0.15 0.21 -0.03 -0.88 -1.62 -2.88 -3.41 0.27 0.44 0.66 0.36 0.55 0.24 0.21 0.04 -0.37 -0.65 -1.36 -1.3 0.37 0.11 0.11 0.13 0.09 -0.05 0.16 0.43 -0.18 -0.03 -0.08 0.16 -0.07 -0.03 0.59 0.18 0.32 0.41 0.24 0.34 0.07 -0.77 -0.77 0.59 -0.68 0.27 0.63 0.75 0.83 0.53 -0.99 0.48 0.65 0.45 0.17 0.32 0.26 -0.05 0.34 0.28 0.43 -0.18 -0.16 0.55 0.49 -0.01 0.11 0.51 0.52 0.38 0.36 0.42 0.86 0.48 0.64 0.16 0.01 -0.36 -0.38 0.19 0.62 0.41 0.75 0.46 0.74 0.57 0.56 1.59 0.57 0.55 0.22 0.37 0.46 0.19 0.16 -0.25 0 0.2 -0.92 0 0.08 -0.31 -0.23 0.27 -0.45 0.85 0.39 1.04 0.17 0.28 0.54 0.5 -0.05 -1.13 1.51 At3g15850 258250_at FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 7 fatty acid desaturation | 16:0 monogalactosyldiacylglycerol desaturase activity | photoinhibition
glycosylglyceride desaturation pathway
Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.86 5.00
At1g36390 0.666
similar to co-chaperone CGE1 precursor isoform b (Chlamydomonas reinhardtii) -0.28 -0.03 -0.03 0.57 0.16 -0.56 -0.18 -0.2 -1.01 -0.43 -0.18 -0.2 -0.76 -0.27 -0.52 -0.8 -0.15 -0.19 -0.27 -0.08 -0.55 -0.26 -0.03 0.09 0 0.17 0.13 -0.01 0.2 0.2 0.1 -0.12 0.19 0.25 0.07 0.38 0.35 0.18 0.35 0.28 0.34 0.39 0.06 -0.05 -0.46 0.22 0.28 -0.49 -0.28 -0.03 -0.08 0.06 -0.25 -0.13 -0.27 0.05 -0.99 0.01 -0.75 0.02 -0.5 0.13 -0.16 0.28 0.55 0.09 0.07 0.44 0.69 0.08 0.44 0.33 0 0.23 0.14 0.16 0.09 -0.59 0.43 0.2 0.08 -0.32 -0.06 -0.72 0.15 0.1 -0.06 0.09 0.08 0.26 0.11 -0.37 0.08 -0.26 -0.28 -0.26 0.33 -0.08 0.16 0.17 0.18 0 0.21 0.16 -0.56 -1.21 -1.22 -1.47 0.28 -0.08 -0.13 -0.07 -0.28 -0.14 0.28 0.03 0.05 -0.45 -0.21 -0.77 0.28 -0.3 -0.23 -0.33 -0.4 -0.33 0 0.11 0.07 0.04 -0.01 -0.47 0.15 -0.49 0.35 0.05 -0.19 0.24 0.34 0.15 0.15 -0.33 -0.68 0.25 0.08 0.44 0.1 -0.01 -0.6 -0.15 -0.47 0.36 0.22 -0.08 0.03 -0.27 -0.84 -0.03 0.71 -0.07 0.56 0.4 0.13 0.08 0.56 0.15 0.25 0 0.45 0.49 0.24 0.36 0.65 0.74 0.18 0.35 -0.13 -0.18 -0.36 -0.53 -0.02 -0.24 0.53 0.21 0.49 0.45 0.06 0.27 0.16 0.26 0.15 0.52 0.6 0.26 0.1 -0.5 0.51 -0.31 0.02 -0.13 -0.19 -0.12 0.23 -0.45 0.17 0.81 0.28 -0.07 0.48 0.22 0.39 0.57 -0.16 -0.1 1.21 At1g36390 260125_at
similar to co-chaperone CGE1 precursor isoform b (Chlamydomonas reinhardtii) 4



Protein folding / chaperonins (chloroplast)


1.24 2.68
At3g17040 0.666 HCF107 Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. 0.31 0.17 0.19 0.76 -0.92 -0.44 0.05 -0.28 -1.9 -1.09 -0.59 0.3 -1.9 -0.62 -0.23 -1.18 -0.16 0.13 -0.56 -0.51 -0.75 -1.03 0 -0.28 -0.61 -0.05 0.04 0.19 -0.34 -0.6 -0.31 -0.3 -0.25 -0.05 -0.8 0.16 0.22 0.12 0.06 0.24 0.1 0.19 -0.25 -0.36 -1.72 0.01 -0.12 -0.83 0.1 0.12 -0.24 0.49 -0.04 0.12 -0.11 -0.03 -0.91 0.03 -0.79 -0.13 -0.32 0.21 0.03 -0.1 -0.15 -0.32 -0.1 -0.11 0.4 -0.15 0.39 0.09 -0.21 0.41 0.16 0.02 0.16 -0.89 0.06 0.19 0.2 0.08 0.02 -0.3 0.3 0.1 -0.03 0.19 0.11 0.46 0.35 0.13 0.4 0.28 0.06 -0.21 0.53 0 0.35 0.04 0.13 -0.12 -0.07 0.18 -0.28 -0.41 -0.52 -1.68 0.13 -0.39 0.02 0.34 0.95 0.95 0.16 0.22 0.23 0.11 -0.17 -1.08 0.8 -0.05 0.17 -0.72 -0.11 0.34 -0.01 0.16 -0.23 0.08 0.11 0.12 0.55 0.14 0.85 0.13 -0.08 0.24 0.15 0.15 0.08 -1.15 0.49 0.22 0.02 0.04 0.3 0.17 0.4 0.43 -1.82 0.69 0.28 0.56 -0.13 -0.28 -0.64 -0.49 0.01 0.12 0.32 0.25 0.24 0.51 0.42 -0.38 0.48 -0.08 0.47 0.41 0.06 0.75 0.57 0.19 0.41 0.52 0.19 0.19 0.28 0.19 0.19 0.19 0.19 0.19 0.3 1.32 1.43 0.63 0.19 0.35 0.36 0.17 0.02 0.5 -0.44 -0.32 0.47 -0.24 -0.2 0.41 0.14 -0.04 -1.32 -0.87 -0.39 1.12 1.31 0.19 0.55 0.28 0.19 -0.2 -0.02 -1.02 1.92 At3g17040 257932_at HCF107 Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. 4 RNA processing | plastid organization and biogenesis


mRNA processing in chloroplast


1.73 3.82
At1g79850 0.665 RPS17 nuclear-encoded 30S chloroplast ribosomal protein S17 -0.98 -0.01 0.34 0.51 0 -0.47 0.08 -0.06 -1.62 -0.66 -0.08 -0.04 -2.38 -0.02 -0.34 -1.02 0.16 -0.01 -0.56 0.03 -0.92 -0.8 -0.12 0.02 -0.45 -0.04 0.27 0 0.13 -0.32 -0.36 0.04 0.31 0.26 -0.24 0.41 0.55 0.54 0.18 0.28 0.62 0.46 0.17 -0.18 -1.23 0.1 0.39 -0.46 -0.41 -0.06 0.36 0.4 -0.13 0.28 -0.25 0.15 -0.54 0.28 -0.51 0.14 -0.49 0.34 0.18 0.54 0.36 0.14 -0.17 -0.19 0.13 -0.11 0.6 0.45 0.04 0.7 0.22 0.14 0.5 -0.17 0.33 0.37 0.24 0.07 0.15 -0.14 0.34 0.11 0.31 0.18 0 0.39 -0.04 0.01 0.07 -0.09 -0.13 -0.18 0.47 0.18 0.62 0.15 0.09 0.28 0.21 0.35 -0.19 -1.06 -1.44 -1.79 0.33 -0.27 -0.22 -0.68 -0.55 -0.33 0.11 0.37 0.16 -0.33 -0.42 -0.83 0.23 -0.41 -0.97 -1.61 -0.61 -0.38 0.1 0.7 0.12 0.11 -0.03 -0.27 -0.01 -0.03 0.31 -0.03 -0.2 0.3 0.02 0.33 0.55 0.1 -0.45 0.16 0.12 0.07 0.53 0.1 -0.15 -0.26 -0.03 0.59 0.16 1.08 0.23 -0.16 0.11 -0.12 -0.13 0.12 0.08 0.61 0.6 0.34 -0.78 -0.03 -0.1 -0.34 0.2 0.44 0.03 -0.52 -0.68 0.77 -0.3 0.36 0.06 0 -0.52 -0.52 0.04 0.18 0.57 0.75 0.42 0.55 0.12 1.12 0.41 0.38 0.67 0.51 0.12 0.22 -0.1 -0.51 0.13 0.04 0 0.2 0.32 -0.23 0.02 -0.07 -2.52 0.72 -0.15 1.63 0.3 -0.34 0 -0.03 0.13 -0.12 1.93 At1g79850 260165_at RPS17 nuclear-encoded 30S chloroplast ribosomal protein S17 6 protein biosynthesis

Ribosome



1.55 4.45
At3g63190 0.664
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); -0.52 0 0.23 1.07 -0.23 -0.4 -0.11 -0.19 -1.35 -1.34 -0.24 0.15 -2.72 -0.26 -0.86 -1.56 -0.08 -0.14 -0.83 -0.11 -0.87 -1.06 0 -0.28 -0.52 -0.17 0.04 -0.05 -0.01 -0.21 -0.56 -0.03 0.22 0.18 -0.48 0.37 0.43 0.34 0.23 0.26 0.44 0.17 0.16 -0.41 -1.4 0.14 0.03 -0.62 -0.74 -0.41 0.02 0.49 -0.24 0.32 -0.53 0.17 -0.87 0.32 -0.89 0.54 -0.83 0.28 -0.17 0.55 0.42 0.14 -0.15 -0.36 0.2 0.17 0.52 0.22 0.19 0.18 0.5 0.77 0.21 -0.43 0.33 0.48 0.76 0.38 0.44 0.27 0.46 0.24 0.31 0.32 0.17 -0.04 0.33 0.57 0.57 0.18 0.05 -0.1 0.26 0.39 0.49 0.42 0.24 -0.22 0.12 -0.01 -0.3 -1.38 -1.62 -1.93 0.35 0.16 -0.04 -0.17 0.23 0.17 0.06 0.42 0.16 -0.55 -0.54 -1.14 0.43 0.17 -0.14 0.08 0.13 -0.28 0.05 0.59 0.46 0.44 0.34 -0.45 -0.05 -0.03 0.17 0.3 0.54 0.51 0.39 0.42 0.31 0.11 -0.57 0.2 0.11 0.48 0.44 0.07 0.08 -0.05 0.11 0.44 0.21 -0.01 -0.09 0.08 -0.09 -0.33 0.23 0.3 0.88 0.56 0.48 0.3 -0.28 -0.14 0.38 0.38 0.35 0.16 -0.03 -0.05 0.57 0.37 0.49 0.24 -0.07 -0.27 -0.56 -0.63 -0.37 -0.06 0.17 0.23 0.12 0.1 -0.08 0.46 0.35 0.37 0.01 0.59 0.05 0.03 -0.04 -0.86 -0.02 0.27 -0.19 0.04 0.4 -0.01 -0.97 -0.28 -2.96 1.31 -0.04 2.31 0.09 -0.33 0.47 -0.12 0.06 -0.67 1.55 At3g63190 251172_at
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); 4
protein synthesis | biogenesis of chloroplast
Translation factors



1.58 5.29
At4g02510 0.663 TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. -0.72 0.27 0.25 0.43 0.08 -0.84 -0.37 -0.37 -1.04 -0.56 -0.26 -0.05 -1.12 -0.28 -0.89 -0.55 -0.35 -0.1 -0.3 -0.28 -0.7 -0.4 0.12 -0.05 -0.33 0.03 0.28 0.28 0.06 -0.25 -0.02 0.26 0.21 -0.11 -0.25 0.33 0.11 0.24 0.08 0.11 0.05 0.4 0.34 -0.01 -0.63 0.03 -1.12 -0.7 -0.16 -0.07 0.04 0.21 -0.17 0.08 -0.38 -0.11 -1.11 -0.03 -1.13 -0.03 -0.93 -0.05 -0.27 0.46 0.38 0.13 0.08 0.38 0.39 0.17 0.46 0.3 0.16 0.21 0.35 0.12 0.22 -0.75 0.2 0.21 0.13 0.01 0.06 -0.15 0.21 0.27 0.23 0.22 -0.01 0.16 0.2 0.25 0.23 0.17 0.12 -0.03 0.28 0.32 0.31 0.09 0.02 0.14 0.16 0.36 -0.7 -0.5 -0.87 -0.6 0.1 -0.02 0.05 0.07 0.16 0.24 -0.01 0.25 -0.25 -0.56 -0.61 -0.49 0.18 0.09 -0.25 -0.85 -0.26 -0.19 -0.3 0.53 -0.1 -0.01 -0.05 -0.05 -0.11 -0.08 0.42 0.2 0.07 -0.03 0.12 -0.03 0.09 -0.61 -0.5 0.21 0.35 0.04 0.22 0.28 0.23 -0.14 -0.15 0.17 0.16 0.17 -0.14 -0.03 0.32 -0.87 -0.5 -0.28 0.21 0.18 -0.11 0.09 0.57 0.28 0.13 0.03 0.14 0.35 -0.06 -0.13 0.33 0.49 0.11 0.15 0.24 0.16 -0.03 0.38 0.51 0.52 0.49 0.18 0.16 0.2 0.2 0.65 0.42 0.28 0.18 0.52 0.16 0.11 0.28 -0.09 0.2 0.26 -0.04 -0.39 -0.17 0.49 -0.59 0.43 -1.78 0.32 -0.26 2.25 0.38 -0.3 0.13 0.54 0.15 -0.38 1.48 At4g02510 255482_at TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. 9 transmembrane receptor activity | protein-chloroplast targeting protein targeting, sorting and translocation | transport routes | chloroplast transport

Chloroplastic protein import via envelope membrane | Toc apparatus


1.33 4.04
At5g52100 0.661
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) -0.7 -0.2 0.31 0.31 0.06 0.31 0.31 0.95 -1.87 -1.36 -0.22 -0.15 -2.63 -0.02 -1.05 -1.41 -0.15 -0.01 -1.12 -0.27 -0.61 -0.94 -0.06 -0.03 -0.52 -0.08 0.4 -0.06 -0.2 -0.33 -0.41 0.15 0.05 -0.03 -0.59 0.31 0.45 0.56 0.31 0.28 0.68 0.44 0.06 -0.28 -1.62 0.38 0 -0.79 -0.69 -0.65 0 0.7 0.05 0.51 -0.33 0.22 -0.89 0.37 -0.87 0.13 -0.84 0.55 -0.25 0.13 -0.21 -0.34 -0.04 0.14 -0.22 0.07 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.81 0.11 0.17 0.63 0.48 0.37 0.06 0.31 0.31 0.31 0.31 0.31 0.31 0.62 0.37 0.57 0.28 -0.22 0 0.31 0.31 0.31 0.31 0.31 0.31 0.61 0.18 -0.42 -1.03 -2 -2.15 0.31 0.31 0.31 0.31 0.31 0.31 0.42 0.2 0.05 -0.46 -0.8 -1.12 0.31 0.31 0.31 0.31 0.31 0.31 0.35 0.16 0 0.33 0.2 0.19 -0.15 0.05 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 -0.5 -0.28 -0.68 0.71 0.86 0.27 -0.1 -0.72 -1.4 0.31 0.31 0.31 0.31 0.31 0.31 0.11 0.77 0.31 0.67 0.5 0.44 0.38 0.61 0.35 0.34 0.61 0.31 0.31 0.31 0.16 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 0.24 -0.42 -1.04 -0.48 -0.14 -0.12 0.35 0.34 -0.14 -2.15 -1.93 -1.87 0.12 -0.57 1.26 0.16 0.65 0.31 -0.53 0.31 -2.25 0.31 At5g52100 248402_at
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) 2

lysine biosynthesis I Lysine biosynthesis Biosynthesis of Amino Acids and Derivatives | Lysin from aspartate


1.99 3.89
At5g54600 0.661 CL24 50S ribosomal protein L24, chloroplast (CL24 -1.17 -0.08 0.42 0.75 -0.1 -0.42 -0.09 -0.16 -1.06 -0.75 -0.13 -0.02 -1.69 -0.23 -0.6 -0.8 0.03 -0.13 -0.56 -0.09 -0.77 -0.82 -0.03 -0.23 -0.44 -0.09 0.09 -0.06 -0.14 -0.25 -0.53 -0.28 0.11 0.06 -0.16 0.22 0.47 0.47 0.12 0.27 0.42 0.02 -0.09 -0.13 -1.23 0.17 -0.1 -0.16 -0.52 -0.34 0.09 0.27 -0.26 0.22 -0.37 0.28 -0.74 0.23 -0.66 0.07 -0.57 0.21 -0.17 0.36 0.4 0.07 -0.13 -0.13 0.13 0.1 0.33 0.16 0.04 0.44 0.49 0.17 0.4 0.04 0.23 0.28 0.21 -0.17 0.16 -0.11 0.38 0.18 0.13 0.28 0.39 0.31 0.03 0.14 0.12 -0.05 -0.04 -0.28 0.24 0.22 0.35 0.27 0.23 0.15 0.18 0.14 -0.19 -1.02 -1.17 -1.49 0.03 -0.2 -0.05 0.03 0.09 -0.31 0.2 0.12 0.13 -0.35 -0.22 -0.74 0.13 -0.13 -0.2 -0.44 0.03 -0.17 -0.06 0.3 0.07 0.03 -0.01 -0.28 0.05 -0.28 0.31 -0.3 -0.04 0.24 0.28 0.13 0.19 0.09 0.18 0.07 -0.25 0.38 0.4 0.06 -0.23 -0.14 -0.01 0.23 0.41 0.46 -0.04 -0.28 -0.76 0.01 0.23 0.16 0.4 0.31 0.43 0.41 0.27 -0.2 0.23 0.12 0.27 0.14 0.42 0.56 0.62 0.28 0.48 0.39 0.1 0.16 -0.03 -0.02 -0.18 -0.36 0.34 0.06 0.27 0.25 0.17 0.38 0.22 0.5 0.14 0.33 0.25 0.11 -0.12 -0.56 0 -0.02 0.05 -0.11 0.43 -0.34 0.23 -0.66 -3.51 2.64 0.79 1.08 0.1 -0.16 0.34 -0.18 0.28 -0.17 1.84 At5g54600 248174_at CL24 50S ribosomal protein L24, chloroplast (CL24 6


Ribosome



1.24 6.15
At3g10230 0.659 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -0.62 0.39 0.35 0.31 -0.41 -0.77 -0.16 -0.3 -0.69 -0.65 -0.42 -0.04 -0.52 -0.34 -0.72 -0.66 -0.37 -0.07 -0.39 -0.48 -0.69 -0.56 0.05 -0.26 -0.4 -0.12 0.12 0.11 -0.14 -0.48 -0.28 0.15 -0.23 -0.08 -0.48 0.34 0.25 0.14 0.21 0.24 -0.07 -0.05 -0.18 -0.2 -1 0.18 -0.87 -0.83 0.02 -0.31 0.19 0.36 0.18 0.07 0.04 -0.06 -0.72 -0.17 -0.66 -0.13 -0.47 0.26 0.08 -0.08 -0.01 -0.23 0.18 -0.06 0.07 0.19 0.63 0.28 0.36 0.52 0.34 0.54 0.34 -0.67 -0.04 0.26 0.19 0.28 0.03 -0.22 0.11 0.13 0.45 0.22 0.13 0.28 0.18 0.22 0.34 0.53 0.04 0.01 0.12 0.33 0.35 0 0.15 0.18 -0.05 0.01 -0.33 -0.03 -0.81 -0.98 0.03 -0.02 0.09 0 0.53 0.21 0.16 0.28 0.08 0.06 -0.63 -0.69 0.24 0.15 -0.2 -0.57 0.02 -0.3 0.34 0.45 0.01 0.22 0.13 0.47 0.19 -0.04 0.27 -0.12 -0.18 0.32 0.26 0.33 0 -0.7 -0.44 0.23 0.12 0.35 0.43 0.47 0.79 0.34 -1.04 0.35 0.52 0.5 0.51 0.45 -0.61 -0.91 0.1 0.03 0.35 0.07 -0.08 -0.33 0.21 0.27 0.51 0.03 0.34 0.27 0.43 0.23 0.28 -0.07 0.68 0.2 0.25 0.37 0.21 -0.82 -0.5 -0.34 0.14 0.11 0.56 0.17 0.27 0.52 0.31 0.4 0.37 0.31 0.1 0.31 -0.13 -0.19 -0.31 -0.17 -0.54 0.24 0.22 -0.04 -0.56 -0.45 -0.67 0.66 0.16 0.98 0.32 0.23 -0.22 0.11 0.17 -1.46 0.51 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.24 2.44
At4g25050 0.659 ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. -0.43 0.18 0.24 1.03 -0.19 -0.36 0.17 0.05 -1.92 -0.54 -0.35 -0.05 -2.56 -0.17 -0.56 -1.14 -0.02 0.42 -0.61 -0.12 -0.48 -0.83 -0.07 -0.08 -0.62 -0.41 0.2 0.19 0 -0.34 -0.72 -0.09 0.33 -0.03 -0.09 0.46 0.42 0.5 0.1 0.13 0.6 0.68 0.3 -0.27 -1.74 0.2 0.64 -0.28 -0.35 -0.73 0.24 0.33 0.02 0.42 -0.24 0.43 -0.75 0.24 -0.71 0.15 -0.65 0.32 0.05 0.33 0.21 0.12 0 -0.08 0.26 0.1 0.26 0.07 -0.21 0.25 0.73 0.48 0.53 -0.52 0.41 0.27 0.21 0.01 0.32 0.03 0.08 -0.25 0.33 0.67 0.43 0.45 0.26 0.15 0.16 -0.05 -0.34 0.06 0.09 -0.28 0.51 0.47 -0.04 0.13 0.07 -0.08 -1.21 -2.49 -3 -2.69 -0.5 -0.73 0.25 0.38 0.49 0.56 0.17 0 -0.7 -0.95 -0.83 -1.17 0.18 -0.56 -0.28 0.07 0.03 0.53 -0.08 0.53 -0.1 -0.16 -0.25 -0.24 0.08 0.05 0.59 -0.48 0.22 0.15 0.53 0 0.35 -0.01 -0.34 0 -0.56 0.07 0.25 0.38 0.2 0.51 0.02 0.06 0.11 0.75 0.71 0.28 -0.36 -0.05 0.59 0.74 0.33 0.18 0.2 0.32 -0.06 -0.23 -0.2 -0.08 0.3 0.08 -0.63 0.47 0.86 0.62 -0.11 0.06 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.03 0.41 -0.12 0.74 0.4 0.4 0.42 0.57 0.28 0.4 0.2 -0.62 0.14 -0.03 -0.34 0.1 0.2 -0.31 0.12 -0.13 -1.48 0.86 0.24 0.67 0.22 0.35 0.71 0.21 -0.13 -0.23 2.54 At4g25050 254102_at ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. 6 response to light | fatty acid biosynthesis


Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of fatty acids in plastids

1.54 5.54
At4g18480 0.658 CHLI1 Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. -0.26 0.09 0.11 1.05 -0.31 -0.71 -0.28 -0.32 -1.77 -0.86 -0.63 0.01 -2.39 -0.43 -1.12 -0.82 -0.2 0.03 -0.5 -0.39 -0.83 -0.59 -0.03 -0.09 -0.69 -0.19 0.3 0.13 -0.02 -0.4 -0.48 -0.02 0.41 -0.01 -0.51 0.25 0.36 0.38 0.1 0.16 0.54 0.55 0.53 -0.08 -1.3 0.28 0.69 -0.6 -0.37 -0.22 0.23 0.39 -0.07 0.24 -0.45 0.22 -1.1 0.28 -0.94 0.19 -0.88 0.34 0 0.48 0.36 0.04 -0.04 -0.08 0.22 0.28 0.15 0.22 0.03 0.57 0.37 0.4 0.54 -0.48 0.44 0.33 0.39 0.06 0.26 0.1 0.38 0.23 0.35 0.21 0.34 0.41 0.05 0.21 0.32 0.1 0.06 -0.07 0.43 0.23 0.41 0.17 0.32 0.44 0.39 0.23 -0.23 -1.19 -1.52 -1.68 0.11 -0.17 -0.06 -0.31 0.18 0.65 0.28 0.13 0.02 -0.4 -0.3 -0.56 0.22 0.03 0 -0.4 0.12 0.61 -0.09 0.47 0.27 0.16 0.17 -0.28 0.16 -0.01 0.38 -0.08 -0.21 0.48 0.25 0.37 0.28 -0.08 -0.23 0.09 0.26 0.31 0.34 0.24 0.22 0.37 0.12 0.71 0.49 1.13 0.66 0.21 -0.66 -0.43 0.56 0.31 0.5 0.38 0.22 -0.26 -0.28 -0.22 0.19 0.23 0.34 0.32 -0.67 -0.05 0.13 -0.08 -0.03 0.22 -0.12 -0.37 -0.73 -0.26 -0.26 -1.05 0.23 -0.14 0.31 0.78 0.12 0.84 0.11 0.42 0.44 0.66 0.32 0.03 -0.09 -0.77 0.16 0.16 -0.22 0.08 0.2 0 -0.53 -0.78 -4.84 1.06 0.27 1.15 0.12 0.25 0.28 -0.03 -0.2 -0.96 3.13 At4g18480 254623_at CHLI1 Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. 10 magnesium chelatase activity | chlorophyll biosynthesis | magnesium chelatase complex
chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.60 7.97
At4g35250 0.658
low similarity to vestitone reductase (Medicago sativa subsp. sativa) -1.5 0.38 0.26 1.41 -0.18 -0.8 -0.49 -0.59 -1.87 -0.98 -0.14 0.22 -1.97 -0.4 -0.83 -1.48 0.09 -0.16 -0.98 0.01 -0.95 -1.2 -0.25 -0.28 -0.48 -0.24 -0.14 0.07 0.14 -0.28 -0.55 -0.31 -0.06 0.23 -0.38 0.32 0.24 0.3 0.06 0.11 0.09 -0.07 -0.4 -0.24 -1.74 0.07 -0.64 -0.78 -0.44 -0.28 0.12 0.33 -0.02 0.28 -0.22 -0.07 -1.01 0.16 -0.92 0.08 -0.84 0.43 -0.05 0.3 0 -0.04 -0.11 -0.31 0.03 0.17 0.65 0 0.23 0.42 0.39 0.36 0 -0.26 0.21 0.25 0.42 0.38 0.07 -0.01 0.21 0.1 0.66 0.28 0.05 0.24 -0.03 0.05 0.4 0.46 -0.13 -0.16 -0.11 0.19 0.56 -0.18 0.07 0.13 -0.01 0.03 0.34 0 -1.04 -1.45 -0.17 -0.28 0.33 0.03 0.57 0.23 0.2 0.33 0.5 0.22 -0.48 -0.75 0.28 -0.13 -0.66 -0.94 -0.02 0.14 0.31 0.48 0.12 0.22 0.27 0.27 -0.05 -0.21 0.74 -0.13 -0.01 0.33 0.03 0.39 -0.12 -0.02 -0.75 0.09 0.03 0.48 0.25 0.38 0.91 0.9 -0.13 0.34 0.6 0.38 0.17 -0.16 -0.38 0.04 0.56 0.26 0.72 0.08 0.12 -0.22 -0.15 -0.19 0.44 0.16 0.86 0.04 0.19 0.15 1.07 0.04 0.96 0.65 0.07 -0.15 -0.15 -0.03 -0.03 -0.43 0.32 -0.32 0.56 0.87 1.64 1.41 0.62 0.81 0.67 0.46 0.06 0.08 0.44 -0.15 -0.21 -0.28 -0.37 0.42 0.37 -0.24 -1.3 -0.92 -3.12 0.69 -1.57 3.8 0.45 0.18 0.14 -0.52 0.08 0.21 0.52 At4g35250 253197_at
low similarity to vestitone reductase (Medicago sativa subsp. sativa) 2

lysine biosynthesis I | colanic acid building blocks biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




1.78 6.92
At4g09650 0.656
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) -1.5 0.26 0.72 0.48 -0.3 -0.71 -0.13 -0.02 -1.7 -0.69 -0.72 0.01 -2.38 -0.4 -1.17 -0.99 -0.13 0.07 -0.61 -0.49 -0.8 -1.03 0.04 0.12 -0.45 -0.19 0.16 0.1 0.1 -0.34 -0.34 -0.23 0.31 0.1 -0.4 0.23 0.23 0.45 0.16 0.17 0.51 0.57 0.09 -0.09 -1.53 0.2 0.49 -0.55 -0.25 -0.37 0.22 0.33 0.02 0.27 -0.31 0.17 -0.83 0.28 -0.74 0.22 -0.73 0.39 -0.1 0.06 0.22 0.06 0.03 -0.26 0.08 0.01 -0.01 0.13 0.2 0.33 0.38 -0.35 0.38 -0.67 0.44 0.31 0.31 0 0.2 0.13 0.07 0.51 0.13 0.09 0.36 0.39 -0.06 0.21 0.4 -0.01 0.11 0.06 0.08 0.56 0.6 0.43 0.31 0.43 0.12 0 -0.37 -0.87 -1.63 -1.95 0.15 0.47 0.06 0.24 0.1 0.39 0.28 0.3 0.25 -0.25 -0.41 -0.67 0.15 0.4 -0.18 0.04 0.04 0.74 0.02 0.25 0.19 0.16 0.14 -0.06 0.13 0.25 0.17 -0.16 0.47 0.26 0.21 0.23 0.35 -0.21 0.43 0.08 -0.45 0.21 0.57 0.27 0.11 0.05 -0.49 0.41 0.69 0.87 0.21 -0.53 -0.6 0.2 0.7 -0.06 0.22 0.4 0.53 0.13 -0.16 -0.05 -0.03 0.09 0.28 0.02 -0.07 -0.15 0.34 0.45 -0.23 0 -0.03 -0.09 -0.24 -0.1 0.18 0.12 -0.21 0.66 0.23 0.76 0.88 0.9 0.26 0.39 0.24 0.22 0.17 0.18 -0.17 -0.77 0.01 -0.08 -0.09 0.09 0.08 -0.4 0.01 -2.33 -3.1 1.46 0.41 0.87 0.44 0.26 0.8 -0.03 0.19 -0.63 1.3 At4g09650 255046_at
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) 4
transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


1.60 4.57
At4g11175 0.655
translation initiation factor IF-1, chloroplast, putative -1.13 0.28 -0.06 0.56 -0.36 -0.38 0.06 -0.05 -0.96 -0.51 -0.6 -0.09 -0.87 -0.33 -0.64 -0.95 -0.44 -0.07 -0.44 -0.44 -0.75 -0.81 0.28 0.07 -0.18 -0.16 0.28 0.17 0.27 -0.11 -0.46 0.1 0.4 0.18 -0.13 0.27 0.45 0.44 0.22 0.11 0.43 0.36 0.22 -0.12 -0.65 0.21 0.48 -0.66 -0.15 -0.15 -0.01 0.51 -0.03 0.11 -0.3 0.13 -0.95 0.22 -0.87 -0.06 -0.56 0.19 -0.13 0.21 0.15 -0.31 -0.05 0.14 -0.04 0.03 0.08 0.42 0.48 0.34 0.62 0.05 0.28 -0.81 0.01 0.08 -0.14 -0.1 -0.23 -0.5 0.27 0.15 -0.15 0.19 -0.38 0.13 -0.36 -0.19 0.09 -0.07 -0.57 -0.24 0.28 0.22 -0.07 0.35 -0.06 0.17 -0.18 -0.09 -0.62 -0.69 -1.29 -1.34 0.06 0.24 -0.19 0.1 0.03 0.03 0.12 0.02 0.05 -0.16 -0.27 -0.51 0.14 0.09 0.53 0.51 -0.15 -0.23 0.24 0.36 -0.19 -0.23 -0.41 -0.23 -0.16 -0.24 0.24 -0.1 -0.16 0.08 0.16 -0.24 0.14 -0.17 -0.78 0.67 0.48 0.41 0.17 0.34 0.07 0.05 -0.12 0.25 0.27 0.16 0.08 -0.12 -0.35 -0.48 0.05 0.23 0.53 0.17 -0.09 -0.47 0.32 0.33 0.13 0.39 0.18 0.18 0.19 0.49 0.94 0.76 0.51 0.74 0.03 0.08 0.07 -0.18 0.17 0.11 0.57 0.4 0.54 0.47 0.39 0.11 0.54 0.42 0.35 0.6 0.28 -0.08 -0.14 -0.66 -0.08 0.03 -0.1 0.01 -0.07 -0.16 0.08 -0.61 -0.63 0.09 0.15 0.85 0.51 0.78 0.04 0.65 0.31 -0.72 0.93 At4g11175 254910_at
translation initiation factor IF-1, chloroplast, putative 4


Translation factors Translation (chloroplast)


1.33 2.28
At1g48030 0.653
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) -0.44 0.23 0.1 0.56 0.06 -0.19 -0.23 -0.04 -1.02 -0.65 -0.19 -0.18 -1.33 -0.21 -0.25 -0.66 0.03 0.12 -0.39 -0.13 -0.33 -0.71 0.06 -0.11 -0.22 -0.09 0.05 -0.12 0.01 -0.3 -0.27 -0.01 0.22 0.01 -0.31 0.16 0.17 0.16 0.07 0.2 0.05 0.06 -0.18 -0.04 -0.66 0.12 -0.67 -0.55 -0.31 -0.38 -0.03 0.32 -0.12 0.19 -0.37 0.17 -0.73 0.17 -0.76 0.22 -0.56 0.39 -0.16 -0.2 -0.05 -0.14 -0.01 -0.07 -0.01 0.05 0.11 0.04 -0.09 -0.09 0 0.01 0 -0.41 0.1 0.23 0.56 0.36 0.21 0.21 0.22 0.11 0.12 -0.09 0.14 0.05 0.28 0.2 0.39 0.36 0.21 0.1 0.01 -0.01 0.11 0.19 0.01 0.15 0.15 0.11 -0.1 0.01 -0.75 -0.76 0.06 0.07 0.2 0.37 0.28 0.27 0.31 0.41 0.35 0.24 -0.3 -0.37 0.06 0.01 -0.19 -0.24 0.23 0.15 -0.06 0.28 0.25 0.36 0.43 0.24 -0.03 0.26 0.11 0.14 -0.03 0.14 0.26 0.24 0.28 -0.01 0.1 0.14 -0.45 0.57 0.56 0.31 0.24 -0.34 -0.33 0.21 0.03 0.14 -0.03 -0.07 -0.01 -0.23 0.3 0.12 0.36 0.3 0.15 -0.45 -0.11 0.2 0.23 0.2 0.27 0.01 -0.08 -0.46 0 0.26 0.28 0.31 0.11 -0.04 -0.25 -0.35 -0.23 -0.07 0.28 0.09 0.09 -0.01 -0.04 -0.03 0.11 0.09 0.12 0.19 0.21 0.23 -0.09 -0.39 -0.24 0.07 0.07 -0.24 -0.09 0.08 0.42 -0.52 -0.26 0.14 0.16 0.99 0.28 -0.19 0.44 -0.31 0.26 -0.94 0.31 At1g48030 260730_at
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) 10 response to light C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)
Glycolysis / Gluconeogenesis | Citrate cycle (TCA cycle) | Pyruvate metabolism | Glycine, serine and threonine metabolism Intermediary Carbon Metabolism metabolism of acyl-lipids in mitochondria

1.03 2.32
At1g55490 0.652 CPN60B encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. -1.13 -0.11 0.3 1.45 0.34 -0.1 0.04 0.01 -2.02 -1.56 -0.15 -0.02 -3.33 -0.32 -0.63 -0.92 -0.23 -0.27 -0.91 -0.07 -0.98 -1.07 -0.18 -0.19 -0.8 -0.24 0.49 -0.01 0.04 -0.35 -0.85 0.07 0.44 -0.27 -0.39 0.48 0.46 0.3 0.15 0.32 0.7 0.87 0.23 0.07 -1.52 0.28 0.18 -0.61 -0.73 -0.4 0.14 0.4 -0.12 0.23 -0.38 0.41 -0.76 0.5 -0.73 0.41 -0.62 0.32 -0.14 0.63 0.63 0.16 -0.23 0.23 0.31 0.28 0.09 0.06 0.01 0.36 -0.11 -0.17 0.08 -0.3 0.7 0.38 0.23 -0.09 0.04 -0.06 0.2 0.06 0.14 0.1 0.08 0.01 0.38 0.12 0.17 -0.1 -0.23 -0.07 0.43 -0.11 0.28 -0.02 -0.17 -0.61 0.41 0.54 -0.17 -1.53 -1.96 -2.34 0.33 0.06 0.19 -0.4 -0.79 -1.12 0.32 0.32 -0.03 -0.71 -0.52 -0.83 0.24 -0.15 -0.21 -0.71 -0.96 -0.79 -0.16 0.8 0.49 0.26 -0.05 -0.28 0.09 -0.15 0.51 0.32 0 0.18 0.1 0.28 0.31 0.05 -1.28 0.7 0.36 0.57 0.27 0.38 0 -0.09 0.45 0.28 0.07 0.35 0.19 0.23 0.56 -0.45 0.39 0.07 0.72 0.28 0.21 0.21 0.6 -0.14 0.03 0.32 0.28 0.23 -0.09 -0.2 0.07 0.09 0.42 0.47 0.13 -0.02 -0.07 0.04 0.28 -0.12 1 0.62 0.38 0.59 0.18 1.37 0.17 0.2 0.22 0.88 0.59 0.37 0.41 -0.28 0.1 0.07 -0.07 -0.66 0.02 0.67 -0.98 0.1 -3.31 0.76 0.06 2.76 0.36 0.07 0.61 0.28 0.06 -0.65 3.98 At1g55490 265076_at CPN60B encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. 10 chaperone cofactor dependent protein folding | cell death | systemic acquired resistance | protein folding


Protein folding / chaperonins (chloroplast)


1.79 7.32










































































































































































































































page created by Alexandre OLRY 05/24/06