Co-Expression Analysis of: CYP97C1, LUT1 (At3g53130) Institut de Biologie Moléculaire des Plantes











































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g53130 1.000 LUT1, CYP97C1 cytochrome P450 family protein, Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. -0.1 -0.31 0.07 1.12 0.11 0.05 0.69 0.24 0.15 0.06 0.03 0.03 0.03 -0.01 0.12 0.05 0.37 0.23 0.13 -0.03 -0.03 0.04 -0.17 -0.28 0.04 -0.12 -0.33 0.27 -0.48 -0.34 -0.01 0.13 -0.05 0.01 0.12 -0.1 -0.11 0.06 -0.08 0.03 0.03 0.03 0.03 -0.06 0.22 -0.11 -0.05 0.21 0.32 0.52 0.17 0.02 -0.18 -0.56 0.02 -0.1 -0.2 0.28 0.3 0.73 0.28 0.21 0.19 0.92 -0.05 0.03 0.19 0.14 0.36 0.36 -0.09 -0.19 -0.01 0.08 0.01 0.51 0.7 -1.54 -0.14 -2.04 0.01 -0.15 -0.23 0.06 0.03 -0.34 -0.42 0.07 -0.56 -0.46 0.37 0.2 0.28 -0.37 -0.03 -0.05 -0.09 0.45 -0.38 -0.7 -0.38 -0.36 -0.28 -0.07 0.25 -0.17 0.23 -0.46 -0.02 0.06 -0.23 0.01 0.18 0.01 0.03 -0.5 0.03 0.14 0.27 -0.35 -0.25 0.07 0.01 -0.07 0.1 -0.32 -0.24 -0.31 0.03 0.24 -0.49 0.25 0.28 0.24 -0.09 0.38 0.24 0.2 0.05 0.04 0.32 0.37 -0.18 -0.08 At3g53130 251969_at LUT1, CYP97C1 cytochrome P450 family protein, Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. 9 epsilon hydroxylase activity | carotenoid biosynthesis metabolism



Carotenoid and abscisic acid metabolism | carotenoid degradation cytochrome P450 family, carotenoid epsilon-ring hydroxylase, formation of lutein from ?-carotene 0.92 3.16
At1g48520 0.619 GATB Encodes Glu-tRNA(Gln) amidotransferase subunit B -0.1 0.32 0.35 1.56 0.1 0.03 0.47 -0.24 -0.01 -0.26 -0.03 -0.12 0 -0.36 -0.05 -0.34 -0.05 -0.25 -0.12 -0.06 0.18 0.28 0.07 -0.08 0.47 -0.02 -0.04 0.19 -0.12 -0.19 -0.04 -0.28 -0.5 0.19 -0.17 -0.24 -0.4 -0.04 -0.1 0 0 0 0 -0.23 0.32 -0.23 0.15 0.51 0.33 0.19 0.2 0.3 -0.07 -0.73 0.12 -0.08 -0.23 0.13 -0.02 0.34 0.06 0.14 0.13 1.03 -0.16 0.16 0.55 0.16 0.18 0.19 -0.36 -0.21 -0.22 -0.11 0.12 0.24 0.66 -0.64 0.13 -1.18 0 0.15 0.07 -0.1 0.12 -0.09 -0.03 -0.18 -0.66 -0.74 -0.15 0.16 0.18 -0.1 -0.04 -0.04 0.04 0.3 -0.35 -0.19 0.3 -0.7 -0.76 -0.27 -0.1 -0.05 -0.6 -0.37 -0.25 0.3 0.33 -0.03 0.17 0.11 0.05 -0.3 0.11 0.35 0.61 0.13 0.06 0.24 0.07 0.21 0 0.99 0.14 0.07 0 0 -0.27 0 0.2 -0.15 -0.25 0.24 -0.09 -0.05 -0.16 0.06 -0.13 0.05 -0.22 -0.24 At1g48520 261307_at GATB Encodes Glu-tRNA(Gln) amidotransferase subunit B 6


Other translation factors



1.06 2.74
At2g30150 0.614
UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.12 0.01 0.01 2.04 -0.28 0.13 0.79 -0.12 0.14 0.23 0.05 0.34 -0.04 0.12 0.33 -0.24 0.08 -0.14 0.18 -0.25 -0.35 0.33 -0.74 0.14 0.18 -0.44 -0.69 0.15 -0.21 -0.28 0.1 0.09 -1.02 0.13 0.07 0.41 0.21 -0.08 0.14 0.01 0.01 0.01 0.01 -0.28 0.49 0.09 -0.27 0.35 0.72 0.01 -0.2 0.17 0.01 -1.13 -0.28 0.04 -0.28 0.03 0.5 0.56 -0.06 -0.07 -0.25 3.06 -0.33 -0.1 0.45 -0.03 -0.3 -0.08 -0.22 -0.14 0.43 -0.4 0.27 0.28 0.11 -1.92 0.94 -1.72 0.3 0.38 -0.21 0.22 -0.22 -0.54 0.89 -0.39 -1.46 -2.76 0.19 0.25 0.03 -0.1 0.26 -0.05 0.16 0.23 -0.71 -0.36 0.56 -1.3 -0.02 -0.17 0.81 0.01 0.06 -0.02 -0.13 0.3 -0.26 -0.04 -0.23 -0.28 0.18 0.01 0.55 -0.03 -0.53 -0.01 0.2 -0.21 0.23 -0.2 0.15 -0.33 -0.03 0.36 0.01 0.06 -0.28 0.35 0.41 0.1 0.28 0.37 -0.18 0.26 0.77 0.55 -0.28 0.04 0.2 -0.28 At2g30150 267299_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 1.43 5.82
At1g11870 0.572
Similar to serine-tRNA ligase (EC 6.1.1.11) from Zea mays 0.25 0.17 0.07 0.69 0.05 -0.13 0.69 0.07 0.11 0.01 0.09 -0.2 0.44 0.11 0.2 0.26 0.28 0.28 0.26 0.02 0.02 -0.57 -0.28 -0.03 -0.43 0.1 -0.22 -0.07 -0.15 -0.02 0.05 -0.12 -1.54 0.09 0.07 -0.03 0.31 0.39 1.05 0.01 0.01 0.01 0.01 -0.07 0.43 -0.09 0.09 0.23 0.07 0.33 -0.15 0.17 0.25 -0.94 0.28 -0.04 -0.2 0.31 0.09 0.7 0.11 0.26 0.15 0.7 0 -0.04 0.23 0.36 0.08 0.48 -0.01 -0.23 0 0.41 0.16 0.75 0.4 -1.38 -0.28 -2 -0.08 -0.38 -0.15 0.13 -0.08 -0.52 1.53 0.12 -0.56 -1.02 0.41 0.53 0.48 -0.13 0.18 0.22 -0.06 0.1 -0.17 -0.39 0.33 -0.38 -0.56 0.35 0.16 -0.3 -0.56 -0.47 -0.19 -0.03 -0.06 0.04 0.21 -0.18 0.17 -0.12 0.01 -0.08 0.36 0.03 0.14 0.1 0.02 -0.05 0.05 -2.54 0.51 0.51 0.01 0.28 -0.68 -0.16 -0.28 -0.25 -0.55 -0.23 0.42 0.33 0.12 0.19 -0.45 -0.04 -0.16 -0.11 At1g11870 264350_at
Similar to serine-tRNA ligase (EC 6.1.1.11) from Zea mays 4

tRNA charging pathway Glycine, serine and threonine metabolism | Aminoacyl-tRNA biosynthesis



1.11 4.08
At4g31850 0.556 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 0.12 0.18 0.52 0.81 0.22 0 0.94 -0.02 0.14 0.03 -0.15 0.25 -0.26 -0.36 0.01 -0.08 -0.01 -0.02 0.01 0.14 0.15 0.32 -0.53 -0.03 -0.38 0.14 -0.12 -0.08 -0.27 0.02 0.04 0.3 0.59 0.24 0.02 -0.3 -0.43 0.35 0.03 0.05 0.05 0.05 0.05 0.1 -0.16 -0.28 0.28 0.5 0.5 0.6 0.35 0.27 0.03 -0.36 -0.18 -0.11 -0.13 -0.03 0.31 0.26 -0.09 -0.04 0 0.32 -0.04 0.02 0.01 0.21 0.04 0.32 -0.01 -0.3 0.23 0.13 0.43 0.23 0.35 -1.43 -0.19 -0.49 0.19 0.2 0 0.13 0.05 -0.63 0.21 -0.01 -2.09 -2.06 0.16 0.33 0.2 -0.28 0.13 0.14 -0.08 0.35 0.03 -0.21 0.18 -0.26 -0.34 -0.1 -0.35 -0.15 -0.85 -0.51 -0.32 0.08 -0.42 -0.16 0.27 -0.22 0.05 -0.02 0.05 0.07 0.22 -0.16 0.13 0.01 0.09 0.18 0.1 -0.21 0.14 -0.39 0.05 0.02 -0.33 -0.17 0.2 0.42 0.05 0.33 0.09 0.28 0.55 0.24 0.15 -0.23 -0.13 0.22 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


0.97 3.03
At3g15690 0.544
contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Arabidopsis thaliana) -0.25 0.06 0.06 0.06 -0.02 0.03 0.66 0.35 0.7 0.25 -0.43 0.17 0.36 -0.13 0 0.02 0.1 0.27 0.14 0.17 0.1 -0.28 -0.16 0.12 -0.44 0.02 -0.09 0.59 0.14 -0.12 0.11 -0.07 -0.16 -0.15 0.11 -0.02 0.23 0.45 0.06 0.06 0.06 0.06 0.06 0.2 -0.87 -0.39 -0.2 0.41 0.41 0.52 0.14 -0.12 -0.01 -0.05 -0.24 -0.32 0.01 0.28 0.14 0.54 0.33 0.37 0.04 0.06 0.25 0.32 0.02 0 0.15 0.75 -0.26 0.03 -0.13 0.09 0.12 0.44 0.84 -1.43 0.14 -1.77 -0.3 -0.02 0.68 0.1 -0.19 -1.19 -1.03 0.04 -0.94 -1.28 0.22 0.26 0.16 0.18 0.1 0.24 0.02 -0.11 -0.05 -0.35 -0.51 -0.86 0.34 0.12 0.11 0.07 -0.51 -0.22 -0.19 -0.08 0.41 0.14 -0.01 0.38 0.06 0.06 0.06 -0.2 0.24 -0.7 -0.11 0.11 0.09 0.11 0 1.41 -0.07 0.21 0.06 0.07 -0.51 -1.03 0.06 0.06 -0.06 0.02 0.1 0.11 0.4 0.56 -0.32 0.15 -0.45 -0.33 At3g15690 258269_at
contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Arabidopsis thaliana) 2

fatty acid biosynthesis -- initial steps




1.43 3.18
At1g53840 0.534 ATPME1 encodes a pectin methylesterase 0.3 1.2 -0.05 3.8 -0.14 -0.16 -0.07 -0.25 0.65 -0.08 0.11 -0.37 0.47 -0.55 0.48 -0.18 0.4 -0.23 0.83 -0.53 -0.01 -0.63 -0.75 -0.24 0.15 0.67 0.61 -0.31 -0.47 -0.6 -0.08 0.06 0.1 -0.05 0.06 -0.33 0.59 -0.17 0.65 -0.05 -0.05 -0.05 -0.05 -1.22 0.78 -0.32 0.17 0.01 0.19 0.21 0.35 0.72 0.38 -1.56 -0.02 -0.13 0.04 -0.09 0.04 -0.01 -0.36 -0.22 -0.23 3.43 0 0.11 0.19 0.16 0.16 0.07 0.21 0.5 -0.11 0.18 0.15 -0.77 -0.49 -2.52 -0.04 -2.02 -0.33 -0.17 0.81 0.47 0.05 -0.01 0.81 -0.28 -1.13 -0.82 -0.33 0.34 -0.08 -0.11 0.19 0.14 0.02 -0.03 -0.81 -0.65 -0.2 -0.55 -1.93 0.04 -0.16 -0.05 0.14 -0.52 -0.1 -0.09 0.28 -0.47 0.19 1.21 -0.05 -0.05 0.15 -0.22 1.01 -0.38 -0.46 -0.16 -0.17 -0.15 -0.12 0.65 0.42 0.09 -0.05 -0.18 -0.15 -0.48 -0.11 -0.23 0.1 0.3 -0.21 0.57 -0.22 0.16 0.21 0.53 0.56 0.18 At1g53840 262225_at ATPME1 encodes a pectin methylesterase 10


Pentose and glucuronate interconversions | Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | pectin metabolism


1.61 6.33
At5g49910 0.532 CPHSC70-2 heat shock protein 70 / HSP70 (HSC70-7) 0.19 0.35 0.8 2.06 0.01 -0.03 1.17 0.26 0.07 -0.3 0.18 0.17 0.07 -0.22 -0.33 0.04 0.01 0.54 -0.24 -0.03 0.09 0.3 -0.83 0.15 -0.02 -0.71 -1.04 0.1 -0.4 0.04 -0.48 -0.71 -0.75 0.41 -0.12 0.11 -0.1 -0.01 0.09 -0.06 -0.06 -0.06 -0.06 -0.21 0.04 0.1 0.4 0.87 0.57 1.05 0.7 0.59 -0.63 -1.11 -0.6 0.16 -0.11 0.14 0.17 0.7 -0.22 0.14 -0.24 1.57 0.42 0.68 0.69 0.65 0.79 0.86 -0.28 -0.35 -0.08 -0.56 -0.07 0.53 1.33 0.45 0.24 -0.95 -0.35 -0.32 -0.09 0.24 -0.35 -0.67 0.13 -0.38 -1.76 -1.91 0.53 0.22 0.5 -0.22 -0.17 0.19 0.09 0.03 -0.87 -0.7 -0.05 -0.45 -1.09 -0.14 0.52 -0.53 1.01 -0.3 -0.28 0.08 -1.03 0.06 0.09 -0.18 0.33 -0.16 0.51 -0.38 -0.8 -0.8 -0.62 -0.24 0.23 -0.17 0.07 1.23 0.56 -0.19 -0.06 0.12 -0.04 0.18 -0.48 -0.5 -0.33 -0.3 0.51 -0.06 0.02 -0.24 -0.33 0.55 0.21 0.24 At5g49910 248582_at CPHSC70-2 heat shock protein 70 / HSP70 (HSC70-7) 6 response to heat | protein folding

Folding, Sorting and Degradation | Protein folding and associated processing



1.73 3.98
At1g27480 0.530
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) 0 0.01 0.01 2.35 -0.17 0.02 0.83 0.17 0.72 0.01 0.01 0.01 0.01 -0.27 0.46 -0.28 0.18 0.1 0.53 -0.22 -0.24 0.44 -0.37 0.27 0.06 -0.39 -0.32 0.05 -1.06 -0.39 0.03 0.1 0.05 0.15 0.42 0.11 0.78 0.01 0.01 0.01 0.01 0.01 0.01 0.85 -0.33 -0.06 0.65 0.53 0.23 0.72 0.34 0.62 0.41 -0.01 0.16 -0.14 -0.4 0.3 0.55 1.94 0.45 1.24 1.33 1.19 -0.26 -0.36 -0.64 -0.25 -0.32 -0.32 -0.28 0.19 0.07 0.01 0.25 0.81 0.57 -2.71 -0.21 -2.81 0.15 0.18 0.1 0.24 0.01 -0.39 -0.35 0.07 -2.1 -3.93 0.35 0.48 0.73 -0.31 0.2 0.36 -0.3 -0.34 0.25 0.01 0.64 0.01 0.09 0.17 0.42 0.16 -0.94 -0.62 -0.08 -0.06 -0.66 0.16 0.19 0.01 0.01 0.01 0.01 -0.17 0.19 0.05 0.2 -0.14 0.01 -0.19 -0.14 1.77 -0.23 0.03 0.01 0.01 -0.17 0 -2.71 -2.71 -0.19 0.15 0.04 0.26 0.56 0.19 0.43 -0.22 0.3 -0.78 At1g27480 264442_at
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) 2




Synthesis of membrane lipids in endomembrane system

1.75 6.28
At5g63380 0.527
Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain lenth (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-Co -0.12 0.04 0.04 0.86 0.16 0.14 0.7 0.1 -0.25 -0.12 0.18 0.12 -0.1 0.4 -0.39 0 -0.25 -0.17 -0.28 -0.12 -0.08 -0.14 -0.61 0.03 0.24 -0.03 -0.01 0.14 0.02 0 0.51 -0.12 -0.17 0.16 0.16 0.27 -0.24 -0.28 -0.45 0.04 0.04 0.04 0.04 0.03 0.26 0.33 0.28 -0.02 0.38 0.42 0.08 -0.07 -0.08 -1.18 -0.21 -0.07 -0.09 0.09 0.19 -0.17 -0.31 -0.33 -0.31 0.83 0.43 0.28 0.2 0.38 -0.03 0.37 0.17 -0.07 0.28 0.4 0.89 0.04 0.24 -1.09 -0.14 -1.13 0.04 0.04 0.33 -0.12 -0.02 0 0.21 0.1 -1.49 -1.49 0.25 -0.15 -0.02 0.12 0.01 0.15 0 0.37 -0.08 0.17 0.02 0.14 -0.55 0.22 0.22 0.42 0.15 -0.45 -0.09 0.12 0.53 0.04 -0.05 -0.09 0.04 0.05 0.04 0.07 -0.22 -0.13 -0.32 0.18 -0.01 0.15 -0.09 -1.21 0.05 0.01 0.04 0.25 -0.28 0.18 0.31 -0.27 0.32 0.66 0.11 -0.38 -0.1 0 0.33 -0.4 -0.22 0.06 At5g63380 247380_at
Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain lenth (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-Co 6 fatty-acyl-CoA synthase activity | jasmonic acid biosynthesis
lignin biosynthesis | flavonoid biosynthesis


Phenylpropanoid pathway Acyl activating enzymes , CoA ligases, clade IV, 4-coumarate-CoA ligase like 0.96 2.38
At1g52670 0.508
similar to Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) from Anabaena sp. -0.02 -0.18 -0.07 0.85 0.12 0.1 0.25 0.33 0.44 -0.11 0.2 -0.09 -0.52 0.19 -0.49 0.25 0.07 0.26 0.15 0.01 0.05 -0.56 -0.63 -0.2 0.3 -0.28 -0.28 0.11 -0.03 -0.15 0.12 -0.35 -0.12 0.17 0.24 -0.02 -0.15 0.23 -0.26 0.02 0.02 0.02 0.02 -0.11 0.22 0.2 -0.2 0.44 0.35 0.83 0.11 0.33 -0.21 -0.44 -0.28 -0.06 -0.11 -0.19 0.04 0.23 -0.11 0.35 0.17 0.48 0.04 0.23 0.16 0.04 0.32 0.52 -0.11 -0.35 -0.2 0.06 -0.12 0.24 1.06 0.96 -0.21 -1.58 -0.07 0.08 0.38 0.3 -0.14 0.12 -0.51 0.19 -0.48 -0.55 0.43 0.09 0.25 -0.12 0.24 0.47 -0.08 0.26 -0.49 -0.36 -0.37 -0.63 -0.44 0.11 -0.33 -0.1 -0.34 -0.32 -0.39 0.04 0.08 0.18 0.24 0.19 -0.04 0.23 -0.14 0.1 0.42 -0.57 -0.42 0.12 -0.21 0.11 -0.1 0.13 -0.08 0.28 0.02 0.21 -0.21 -0.12 -0.25 -0.31 -0.12 0.08 0.28 -0.3 0.24 0.28 -0.19 -0.28 -0.33 0.18 At1g52670 262157_at
similar to Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) from Anabaena sp. 2

fatty acid biosynthesis -- initial steps




0.95 2.65
At2g47940 0.504 DEGP2 DegP2 protease 0.22 1.32 0.82 2.89 0.17 -0.02 1.03 0.11 -0.02 0.02 0.35 -0.22 0.31 -0.18 -0.31 0 -0.09 0.07 -0.21 0.04 0.09 -0.75 -0.18 -0.05 0.35 0.28 0.11 0.05 -0.24 -0.34 0.19 -0.24 -1.49 0.22 0.06 -0.26 -0.55 0.02 0.4 0.08 0.08 0.08 0.08 -1.17 0.67 -0.26 -0.14 -0.11 0.22 0.33 -0.1 -0.03 0.14 -1.45 -0.37 0.1 -0.14 0.12 0.46 0.07 -0.06 0.05 0.09 1.96 -0.48 -0.38 -0.38 -0.46 -0.4 -0.27 -0.36 -0.44 0.05 0.52 0.26 -0.06 1.01 0.57 -0.32 -2.54 0.33 0.52 0.17 0.4 -0.25 0.05 0.6 -0.06 -1.56 -1.72 0.25 0.31 0.14 -0.24 0.28 0.28 -0.03 0.28 -0.06 -0.77 0.39 -0.22 -0.74 -0.12 -0.12 0 -0.84 -0.76 -0.31 0.12 -0.09 -0.18 0.11 0.36 -0.07 0.19 -0.1 0.33 1.43 0.02 -0.05 0.41 -0.03 0.27 0.17 0.21 0.25 0.04 0.08 0.06 -0.76 -0.08 -0.32 -0.08 0.19 0.2 0.14 -0.17 0.88 0.23 -0.24 -0.53 -0.05 -0.07 At2g47940 266509_at DEGP2 DegP2 protease 4 serine-type endopeptidase activity | photosystem II repair


Chloroplastic protein turnover | DegP protease


1.57 5.44
At5g14660 0.501 PDF1B encodes a peptide deformylase-like protein 0.11 0.14 -0.2 0.66 -0.04 -0.04 0.84 0.4 0.21 0.02 0.02 0.02 0.02 -0.27 -0.13 0.22 0.25 0.54 0.16 0.02 0.11 0.13 -0.13 -0.05 0.05 -0.23 -0.24 0.24 -0.25 0 -0.22 -0.06 -0.07 0.08 0.18 -0.22 -0.14 0.02 0.02 0.02 0.02 0.02 0.02 -0.19 0.02 -0.15 -0.41 -0.11 0.02 0.25 -0.4 -0.16 -0.24 -0.4 -0.1 -0.06 -0.07 -0.28 -0.23 0.62 0.1 0.32 0.13 0.02 -0.08 0.09 0.2 0.33 0.36 0.4 0.16 -0.32 -0.18 0.18 0.4 0.75 1.15 0.93 -0.17 -2.77 0.02 1.23 -0.4 0.07 0.02 -0.35 1.31 -0.35 -0.14 -0.37 0.48 0.54 0.14 -0.35 0.06 0.09 0.03 0.44 0.15 -0.34 -0.08 -1.11 -0.65 -0.13 -0.26 0 -0.41 -0.43 -0.33 -0.04 -0.13 0.13 -0.03 0.03 0.02 -0.75 0.02 0.15 0.13 0.13 0.16 0.01 -0.03 -0.08 0.11 0.25 0.14 -0.06 0.02 0.08 -0.5 -0.14 -0.17 -0.05 -0.43 -0.14 0.25 0.16 0.21 0.16 -0.54 0.12 -0.36 -0.07 At5g14660 250146_at PDF1B encodes a peptide deformylase-like protein 10
protein modification

Translation (chloroplast)


1.04 4.09



































































































































































page created by Juergen Ehlting 06/08/06