Co-Expression Analysis of: CYP97C1, LUT1 (At3g53130) Institut de Biologie Moléculaire des Plantes

















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap
































































































































































































































MS Excel table
































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.





























































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3






















































































































































































































greater than zero                                                         


























































































































































































































less than zero                                                         


























































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g53130 1.000 LUT1, CYP97C1 cytochrome P450 family protein, Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. -0.59 0.11 0.24 0.83 0.12 -0.07 -0.01 -0.01 -1.24 -0.51 -0.05 0.15 -1.77 0.03 -0.57 -0.99 0.04 0.18 -0.61 -0.03 -0.21 -0.74 -0.13 -0.31 -0.13 -0.02 0.22 0.13 0.03 -0.24 -0.21 -0.01 -0.09 0.19 -0.42 0.11 0.3 0.21 -0.03 0.4 0.42 0.43 0.23 -0.07 -1.04 0.21 0.01 -1.12 -0.34 -0.15 0.22 0.28 0.04 0.28 -0.07 0.3 -0.6 0.47 -0.66 0.51 -0.69 0.25 -0.08 0.43 0.31 0.03 -0.16 0.17 0.01 0.18 -0.6 -0.68 -0.2 -0.24 0.5 -0.51 -0.12 -0.62 0.42 0.23 0.22 0.04 0.11 -0.28 -0.86 -0.27 0.24 0.03 -0.55 0.42 0.02 0.09 0.27 0.03 -0.02 0.05 -0.82 -0.17 -0.23 1.04 -0.32 -0.07 0.12 0.37 -0.42 -0.76 -1.58 -1.94 0.51 0.24 0.24 1.1 0.63 0.49 0.16 0.23 -0.28 -0.61 -0.65 -0.8 -0.3 -0.19 -0.16 1.49 0.07 0.42 0.19 0.55 0.22 0.18 -0.08 -0.01 -0.05 -0.04 0.14 0.13 -1.05 -0.3 0.46 -0.49 0.28 -0.24 -0.93 0.46 0.08 0.31 0.4 0.33 0 -0.56 -0.74 0.04 -0.21 -0.2 1.49 0.63 0.79 0.05 0.7 -0.2 0.47 0.33 -0.01 0.11 0.28 0.16 0.04 0.14 0.17 -0.08 0.24 -0.6 -0.54 1.49 0.3 -0.31 0.13 0.59 0.88 1.05 0.72 0.34 0.62 0.28 0.59 -0.37 -0.24 -0.62 0.33 -0.69 0.31 0.39 -0.01 0.06 0.39 -0.8 -0.08 0.1 -0.47 -0.17 -0.09 -0.04 -0.07 -0.49 -1.5 1.74 -0.7 1.92 0.51 0.49 0.24 0.12 -0.25 -0.93 1.6 At3g53130 251969_at LUT1, CYP97C1 cytochrome P450 family protein, Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. 9 epsilon hydroxylase activity | carotenoid biosynthesis metabolism



Carotenoid and abscisic acid metabolism | carotenoid degradation cytochrome P450 family, carotenoid epsilon-ring hydroxylase, formation of lutein from ?-carotene 1.68 3.86
At3g55330 0.691
photosystem II reaction center PsbP family protein -1.46 0.12 -0.31 1.01 0.17 -0.1 -0.06 -0.14 -1.9 -1.15 -0.05 -0.14 -3.26 -0.05 -0.89 -1.8 0.05 -0.15 -0.82 -0.07 -0.73 -1.15 0.1 -0.18 -0.47 -0.19 0.18 0.09 0.02 -0.21 -0.5 -0.14 0.27 -0.03 -0.52 0.49 0.43 0.47 0.2 0.24 0.41 0.33 -0.06 -0.25 -1.35 0.37 -0.02 -0.69 -0.67 -0.68 0.15 0.3 -0.14 0.33 -0.33 0.34 -0.76 0.35 -0.75 0.34 -0.65 0.33 -0.15 0.22 0.08 -0.15 -0.18 -0.11 -0.05 -0.1 0.28 0.38 0.23 0.1 0.3 0.23 0.23 -0.41 0.31 0.35 0.5 0.42 0.37 0.24 0.23 0.23 0.23 0.23 0.23 0.23 0.27 0.21 0.28 0.12 -0.05 0.15 0.08 0.3 0.23 0.44 0.23 0.23 0.27 0.39 -0.21 -1.27 -2.06 -2.38 0.23 0.23 0.23 0.23 0.23 0.23 0.35 0.53 -0.2 -0.74 -0.76 -0.7 0.23 0.23 0.23 0.23 0.23 0.23 0.25 0.63 0.26 0.31 0.26 0.23 -0.03 0.18 0.23 0.23 0.52 0.23 0.23 0.23 0.23 0.06 -0.78 0.2 -0.39 0.6 0.4 0.4 0.11 -0.68 -0.23 0.23 0.23 0.04 0.23 0.23 0.23 -0.2 0.12 0.23 0.51 0.39 0.34 0.11 -0.17 0.13 0.1 0.25 0.23 0.75 0.23 0.23 0.23 0.23 0.35 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.43 0.23 0.23 0.42 0.05 0.23 0.09 -0.82 -0.37 0.06 -0.03 0.31 0.19 -0.53 -0.67 -1.3 -3.5 2.73 0.82 1.15 0.64 0.17 0.28 -0.28 0.04 -0.43 0.55 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.67 6.23
At1g32550 0.687
Similar to ferredoxin from Synechocystis sp. -1.53 0.22 0.12 1.57 -0.12 -0.7 -0.24 -0.41 -2.06 -1.2 -0.35 -0.08 -2.19 -0.01 -0.92 -1.13 0.11 0.02 -0.56 -0.13 -0.72 -0.79 -0.09 -0.24 -0.47 -0.01 0.11 -0.03 -0.04 -0.4 -0.24 0.04 -0.03 0.39 -0.41 0.23 0.3 0.4 -0.06 0.17 0.26 0.35 -0.21 -0.32 -1.28 -0.06 0 -0.82 -0.47 -0.07 -0.09 0.44 -0.12 0.23 -0.24 0.22 -0.84 0.4 -0.76 0.28 -0.67 0.4 -0.11 0.08 0.16 -0.12 -0.13 -0.12 -0.06 0.03 0.48 0.46 -0.48 0.28 0.01 -0.12 0.42 -0.49 0.17 0.16 0.18 -0.08 -0.04 -0.41 -0.06 -0.49 -0.33 0.14 -0.05 0.5 -0.05 -0.1 0.09 -0.1 -0.26 -0.16 0.17 -0.01 0.71 0.3 0.13 0.56 0.23 0.27 -0.02 -0.67 -0.93 -0.92 0.18 -0.2 0.49 0.55 -0.06 0.68 0.19 0.26 0.12 -0.32 -0.25 -0.3 0.19 0.02 0.68 0.75 -0.44 0.26 0.32 0.24 -0.04 -0.12 -0.21 -0.32 -0.11 -0.04 0.33 -0.07 -0.31 0.32 0.16 0.37 0.64 0 -1.03 0.04 0.28 0.28 0.46 0.09 -0.16 -0.48 -0.01 0.01 -0.09 0.61 0.33 0.38 0.56 -0.12 0.47 -0.43 0.49 0.41 0.47 0.24 -0.26 -0.03 0.18 0.23 0.68 0.31 0.8 0.91 0.28 0.8 0.89 0.98 0.67 0.65 0.51 0.8 0.66 0.71 0.09 0.51 0.49 0.04 -0.26 0.71 0.23 0.35 0.23 0.48 0.33 0.1 -0.42 -1.2 -0.22 -0.05 0.04 0.06 0.13 -0.48 0.15 -1.4 -2.87 1.14 -1.23 1.11 0.49 0.31 0.1 0 -0.05 -0.79 0.91 At1g32550 256468_at
Similar to ferredoxin from Synechocystis sp. 4


Photosynthesis Photosystems | Ferredoxin


1.68 4.44
At3g18890 0.686
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) -1.27 0.16 0.35 0.72 0.67 0.12 0.61 0.14 -2 -0.93 -0.1 -0.14 -3.7 -0.36 -0.21 -1.65 0.03 -0.3 -0.88 -0.1 -0.43 -1.34 -0.24 -0.12 -0.42 -0.1 0.21 0.15 0.09 -0.11 -0.25 -0.16 0.23 0 -0.37 0.38 0.33 0.47 0.26 0.3 0.56 0.54 0.27 0.01 -1.4 -0.06 0.19 -0.61 -0.84 -0.28 0.14 0.6 -0.04 0.38 -0.39 0.44 -0.68 0.42 -0.56 0.48 -0.5 0.55 0.07 0.39 0.23 0.28 -0.08 -0.34 -0.04 0.24 0.35 0.35 0.08 -0.19 0.35 0.67 0.44 -0.63 0.16 0.55 0.21 0.02 0.12 -0.02 0.35 0.05 0.35 0.02 0.41 -0.02 0.03 0.12 0.13 -0.12 -0.19 -0.2 -0.22 0.23 -0.25 0.41 0.28 0.09 -0.08 0.18 -0.72 -2.17 -2.7 -3.27 0.21 0.35 0.35 0.35 0.67 0.44 0.03 0.56 0.02 -0.3 -0.66 -1.48 0.35 -0.11 0.35 0.35 0.38 0.52 -0.02 0.71 -0.05 0.24 0 -0.95 -0.26 -0.1 0.11 -0.12 0.14 -0.07 0.21 0.67 0.32 -0.04 0.11 0.23 -0.43 0.57 0.57 0.16 -0.16 -0.2 -0.4 0.35 0.35 0.35 0.39 0.43 0.44 0.28 1.22 0.96 1.08 0.64 0.59 0.04 0.2 -0.65 0.27 0.35 0.11 0 0.35 0.35 0.51 0.34 0.67 0.44 0.46 0.31 0.46 0.03 -0.11 0.35 0.35 0.4 0.55 -0.31 -0.44 0.18 -0.15 0.4 0.44 0.18 -0.07 0.27 -0.49 -1.14 -0.19 -0.21 0.43 0.4 0 0.04 -0.13 -1.99 -2.29 -0.35 -1.14 3.2 0.62 -0.1 0.35 -0.28 0.09 -0.94 2.02 At3g18890 256655_at
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) 4



Chloroplastic protein import via envelope membrane | Tic apparatus


1.96 6.90
At3g01440 0.663
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; -2.31 0.18 0.35 0.35 0.27 0.15 0.88 0.69 -2.02 -1.2 -0.28 -0.23 -3.56 -0.02 -1.36 -1.67 -0.32 -0.35 -1.04 -0.35 -1 -1.12 0.06 -0.22 -0.71 -0.31 0.09 0.17 0.11 -0.68 -0.81 0.12 0.24 0.08 -0.91 0.54 0.41 0.52 0.31 0.12 0.43 0.38 -0.2 0.09 -1.33 0.24 -0.72 -1 -0.71 -0.98 0.48 0.36 0.22 0.36 -0.04 0.18 -1.19 0.09 -0.88 0.35 -0.59 0.61 -0.09 0.31 0.25 -0.17 -0.28 0.05 -0.33 -0.27 0.35 0.35 0.7 0.35 -0.1 0.35 0.81 -1.41 0.1 0.32 0.3 0.27 0.11 -0.26 -0.1 0.7 0.35 0.35 -0.11 0.45 -0.33 0.28 0.22 0.35 -0.08 0.07 0.35 -0.27 0.35 0.21 0.35 0.81 -0.03 0.4 -1.1 -1.57 -2.49 -2.73 0.43 0.7 0.1 0.35 0.35 0.81 0.18 0.65 -0.22 -1.02 -0.95 -1.23 0.35 0.62 0.35 0.35 0.35 0.71 0.62 1.05 0.15 0.22 -0.48 0.2 -0.19 0.06 0.35 0.35 0.7 -0.09 0.35 0.35 0.81 -0.07 -1.79 0.36 -0.17 1.09 0.37 0.74 -0.18 -1.45 -0.98 0.35 0.7 0.35 0.35 0.35 0.81 -0.67 0.49 0.35 1.39 0.84 0.26 0.7 1.67 1.43 0.55 0.7 0.35 0.35 0.7 0.35 0.2 0.35 0.2 0.81 0.35 0.35 0.35 0.66 0.66 0.35 0.35 0.35 0.35 -0.32 0.7 0.35 0.35 -0.07 0.81 0.73 0.36 0.33 -0.14 -1.36 -0.53 -0.19 0.45 -0.3 -0.05 -0.35 -1.2 -3.9 -3.51 2.58 1.24 1.58 0.47 0.72 0.35 0.28 0.35 -2.66 0.35 At3g01440 258956_at
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; 4 oxygen evolving complex | photosynthesis, light reaction


Photosystems | Photosystem II | Oxygen-evolving enhancer protein


2.29 6.48
At2g39470 0.661
photosystem II reaction center PsbP family protein -3.12 0.24 0.31 0.54 -0.08 -0.41 -0.06 -0.09 -1.66 -1.47 -0.11 -0.02 -3.85 0.16 -0.37 -1.53 0.06 -0.03 -0.8 0 -0.68 -1.52 0.06 -0.05 -0.31 -0.06 0.22 -0.08 -0.04 -0.23 -0.38 -0.11 0 0.3 -0.48 0.39 0.38 0.41 0.26 0.38 0.28 0.22 -0.28 -0.05 -1.87 0.41 -0.51 -0.88 -0.74 -0.35 0.13 0.61 -0.03 0.44 -0.26 0.35 -0.85 0.41 -0.87 0.41 -0.76 0.69 -0.27 0.04 0.07 -0.2 -0.08 0.09 -0.12 0.27 0.1 0.42 0.31 0.18 0.28 0.02 0.25 -0.6 0.14 0.18 0.34 0.17 -0.01 -0.18 0.15 0.36 0.44 0 -0.07 -0.14 0.21 0.1 0.25 0.32 -0.12 0.03 0.03 0.19 0.01 0.46 -0.18 0.2 0.06 0.21 0.07 -0.6 -1.63 -2.49 0.61 0.7 0.75 0.5 0.49 0.26 0.45 0.49 0.44 -0.14 -0.73 -1.07 0.25 0.39 0.3 0.85 1.08 1.15 0.62 0.37 0.01 0.15 0 0.21 -0.13 0.15 0.27 0.44 0.92 0.5 0.44 0.05 -0.11 -0.43 0.1 0.21 -1 0.73 0.94 0.44 0.23 -0.59 -0.78 0.38 0.79 0.74 0.64 0.5 0.73 -0.37 0.43 0.54 0.85 0.35 0.22 -0.16 0.49 0.27 0.4 0.49 0.54 0.46 0.56 0.05 0.35 0.6 0.17 -0.16 0.31 0.31 0.31 0.31 0.21 0.31 0.31 0.46 0.44 0.27 0.3 -0.25 0.06 -0.04 0.16 0.51 0.28 0.28 -0.33 -1.28 -0.56 -0.1 0.02 0.16 0.15 -0.47 -0.65 -3.08 -5.24 2.76 0.92 1.26 0.35 0.84 0.33 -0.65 -0.15 -1.45 0.28 At2g39470 266979_at
photosystem II reaction center PsbP family protein 2



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


2.22 8.00
At3g56650 0.656
thylakoid lumenal 20 kDa protein 0.03 0.08 0.17 0.17 -0.33 -0.22 0.14 -0.16 -1.03 -0.83 -0.2 -0.05 -1.4 -0.01 -0.55 -0.82 0.15 0.06 -0.55 -0.02 -0.71 -0.75 0.1 -0.14 -0.33 -0.08 0.21 -0.05 0.04 -0.2 -0.37 -0.04 -0.02 0.12 -0.36 0.44 0.41 0.54 0.34 0.35 0.52 0.49 0.02 -0.41 -1.25 -0.3 0.24 -0.7 -0.61 -0.39 0.07 0.21 -0.11 0.18 -0.26 0.02 -0.86 0.2 -0.83 0.11 -0.65 0.35 -0.12 0.17 -0.09 -0.1 -0.28 -0.16 -0.18 0.01 0.3 0.32 0.57 0.35 0.48 0.06 0.46 -0.6 0.08 0.11 0.25 0.16 0 -0.13 0.28 0.3 0.18 0.14 0.27 0.39 0.11 -0.01 0.28 0.34 0.09 0.11 0.43 0.35 0.24 0.48 0.47 0.54 0.04 0.01 -0.37 -1.07 -1.6 -1.96 0.61 0.01 0.37 0.23 0.22 0.25 0.21 0.09 -0.11 -0.52 -0.48 -1.03 0.46 0.32 0.48 0.79 0.64 0.2 0.3 0.24 -0.11 0.19 0.11 -0.05 -0.11 -0.21 0.1 0.37 -0.14 0.06 0.28 0.02 0.04 -0.12 -0.23 -0.1 -0.57 0.22 0.25 -0.05 -0.43 -0.42 -0.39 0.46 0.33 0.21 -0.04 0.75 0.39 -0.46 0.21 0.17 0.47 0.3 0.37 -0.19 -0.5 -0.35 0.04 0.11 0.38 0.39 0 0.28 0.44 0.46 0.31 0.09 -0.06 0.33 0.33 0.7 0.42 0.55 -0.17 0.17 0.31 0.41 0.17 0.22 0.18 0.3 0.27 0.33 0.12 0.19 -0.26 -1.14 -0.47 -0.04 -0.11 0.16 0.52 -0.61 -0.66 -1.19 -2.35 1.19 0.42 1.36 0.14 0.17 0.02 -0.07 0.17 -0.62 0.17 At3g56650 251701_at
thylakoid lumenal 20 kDa protein 6



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.37 3.72
At1g60600 0.655
UbiA prenyltransferase family protein -0.19 0.04 0.37 1.05 0.02 -0.11 0.22 0.38 -1.66 -1.07 -0.36 -0.27 -1.85 -0.41 -0.56 -0.89 -0.22 0.11 -0.57 -0.26 -0.63 -0.95 0.07 -0.3 -0.48 0.06 0.35 -0.06 0.06 -0.53 -0.6 0.1 0.04 0.13 -0.46 0.43 0.48 0.42 0.25 0.39 0.6 0.46 0.28 -0.28 -0.76 0.31 0.26 -1.07 -0.57 -0.41 -0.19 0.38 -0.17 0.08 -0.5 0.09 -1.32 -0.02 -1.12 0.2 -1.04 0.32 -0.13 0.19 0.11 -0.22 -0.05 -0.1 0.12 -0.09 -0.08 0.44 0.32 0.27 -0.03 -0.19 0.43 -0.77 0.24 0.12 0.32 0.14 0.17 -0.26 0.09 0.38 0.02 -0.01 0.11 0.17 0.18 0.04 0.26 0.04 -0.1 -0.02 0.06 0.38 0.24 0.3 -0.01 0.35 0.2 0.13 -0.6 -1.35 -1.55 -1.86 0.8 0.43 0.08 0.36 0.57 0.32 0.28 0.24 0.02 -0.45 -0.52 -0.47 -0.03 0.21 -0.08 0.33 0.31 0.33 0.19 0.8 0.25 0.35 0.16 -0.02 0.1 0.12 -0.16 0.51 0.08 0.38 0.1 0.09 0.48 -0.63 -0.55 -0.05 -0.96 0.78 0.38 -0.13 -0.44 -0.81 -1.37 0.26 0.7 0.84 0.21 0.17 -0.04 -0.34 0.61 -0.09 0.83 0.64 0.11 -0.62 0.13 0.04 0.21 0.39 -0.11 0.43 0.48 0.21 0.7 0.52 0.27 0.68 0.24 0.24 0.24 0.14 0.17 0.24 -0.11 0.19 0.03 0.33 0.09 0.4 -0.26 -0.39 0.17 0.63 0.21 0.21 -0.26 -1.29 0.08 0.4 -0.11 -0.02 0.28 -0.33 0.07 -0.09 -1.13 0.95 0.97 0.84 0.46 0.17 0.7 0.57 0.14 -2.08 0.84 At1g60600 264963_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway Ubiquinone biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Phylloquinone biosynthesis
plastochinone and phylloquinone biosynthesis | phylloquinone biosynthesis
1.78 3.13
At5g11450 0.653
oxygen-evolving complex-related, 23 kDa polypeptide of water-oxidizing complex of photosystem II -0.5 -0.01 0.31 1.34 0.04 0.06 0.06 -0.01 -1.68 -1.24 -0.35 0.11 -2.22 -0.35 -0.72 -1.13 -0.25 -0.47 -0.77 -0.15 -1.12 -0.82 -0.08 -0.15 -0.66 -0.14 0.35 0.04 0.02 -0.5 -0.63 0.02 0.01 0.09 -0.19 0.17 0.33 0.36 0.2 0.24 0.56 0.45 0.4 -0.09 -0.91 0.22 0.77 -0.92 -0.8 -0.38 -0.09 0.3 -0.21 0.14 -0.54 0.28 -1.19 0.23 -1.07 0.23 -0.96 0.4 -0.3 0.41 0.25 -0.01 -0.28 -0.17 0.1 -0.14 0.38 0.07 0.02 0.1 0.22 0.12 0.19 -0.46 0.56 0.35 0.5 0.02 0.38 0.16 0.21 0.05 0.34 0.31 0.15 0.25 0.28 0.21 0.4 0.03 0 -0.07 0 0.12 0.36 0.34 0.16 0.19 0.47 0.38 -0.35 -1.6 -1.53 -1.54 0.16 0.17 0.1 0.2 -0.1 0.16 0.45 0.31 -0.21 -0.89 -0.44 -0.42 0.38 -0.01 -0.31 -0.31 -0.31 0.09 0.15 0.49 0.43 0.26 0.01 -0.42 -0.1 -0.08 0.32 0.33 0.22 0.31 0.34 0.22 0.45 -0.12 -1.18 0.27 0.33 0.39 0.35 0.12 -0.28 -0.24 0.08 0.32 0.32 0.23 0.07 -0.15 -0.07 -0.92 0.49 0.16 0.41 0.63 0.28 -0.52 -0.54 -0.15 0.32 0.31 0.38 0.21 0.08 0.39 -0.09 0.53 0.39 0.41 0.01 -0.11 -0.46 0.66 0.71 1.12 1.5 1.02 0.12 0.14 0.13 0.4 0.28 0.2 0.27 0.55 0.37 0.33 -0.08 -1.09 0.04 0.16 0.07 -0.08 0.14 -0.06 -0.61 -0.13 -1.52 0.97 -0.05 0.72 0.13 0.22 0.46 -0.49 0.05 -0.69 1.46 At5g11450 250371_at
oxygen-evolving complex-related, 23 kDa polypeptide of water-oxidizing complex of photosystem II 6
photosynthesis

Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.69 3.72
At5g08280 0.648
hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase -0.33 0.03 0.16 0.4 -0.07 0.1 0.18 0.28 -0.43 -0.05 -0.49 -0.09 -1.45 -0.44 -0.64 -0.66 -0.19 0.34 -0.5 -0.31 0.04 -0.47 -0.05 0.02 -0.15 -0.07 0.18 0 0.03 0.08 -0.2 -0.11 0.12 -0.04 -0.43 0.31 0.33 0.46 0.15 0.14 0.53 0.54 0.31 -0.18 -0.67 0.21 0.56 -0.56 -0.53 -0.16 0.09 0.23 -0.07 0.38 -0.27 0.45 -0.39 0.49 -0.38 0.26 -0.41 0.21 -0.19 0.46 0.19 -0.23 -0.35 -0.5 0.1 -0.05 0.2 -0.18 0.06 0.05 0.16 0 0.16 -0.68 0.51 0.26 0.51 -0.02 0.13 0.22 0.1 0.38 0.15 0.24 0.21 0.18 0.54 0.43 0.41 -0.09 -0.08 -0.06 -0.08 0.27 0.05 0.26 0.1 0.19 0.41 0.37 -0.5 -1.34 -1.38 -1.09 0.14 0.28 0.33 0.43 0.24 0.02 0.34 0.04 -0.27 -0.7 -0.61 -0.52 0.03 0.3 0.31 0.72 0.33 0.37 -0.25 0.49 0.28 0.12 0.05 -0.15 0.11 0.35 0.38 0.19 0.4 0.33 0.31 0.18 0.26 -0.18 -0.18 -0.01 -0.68 0.25 -0.49 -0.42 -1.14 -0.56 -0.15 -0.09 0.17 -0.03 0.37 0.71 0.53 -0.24 0.43 0.2 0.19 0.43 0.22 -0.08 -0.44 -0.56 -0.24 -0.1 0.18 -0.17 -0.32 -0.56 0.19 0.27 0.01 0.17 -0.02 -0.22 -0.1 -0.07 0.8 -0.17 0.14 -0.15 0.13 0.28 0.44 0.37 0.2 0.5 0.08 0.35 0 0.32 -0.4 -1.23 0.02 0.05 -0.02 0.02 0.08 -0.17 -0.49 -0.72 -2.97 1.23 -0.11 2.06 0.07 -0.07 0.05 -0.06 -0.02 -0.76 0.73 At5g08280 246033_at
hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase 10 chloroplast | porphyrin biosynthesis metabolism chlorophyll biosynthesis | biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
1.20 5.04
At4g25050 0.647 ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. -0.43 0.18 0.24 1.03 -0.19 -0.36 0.17 0.05 -1.92 -0.54 -0.35 -0.05 -2.56 -0.17 -0.56 -1.14 -0.02 0.42 -0.61 -0.12 -0.48 -0.83 -0.07 -0.08 -0.62 -0.41 0.2 0.19 0 -0.34 -0.72 -0.09 0.33 -0.03 -0.09 0.46 0.42 0.5 0.1 0.13 0.6 0.68 0.3 -0.27 -1.74 0.2 0.64 -0.28 -0.35 -0.73 0.24 0.33 0.02 0.42 -0.24 0.43 -0.75 0.24 -0.71 0.15 -0.65 0.32 0.05 0.33 0.21 0.12 0 -0.08 0.26 0.1 0.26 0.07 -0.21 0.25 0.73 0.48 0.53 -0.52 0.41 0.27 0.21 0.01 0.32 0.03 0.08 -0.25 0.33 0.67 0.43 0.45 0.26 0.15 0.16 -0.05 -0.34 0.06 0.09 -0.28 0.51 0.47 -0.04 0.13 0.07 -0.08 -1.21 -2.49 -3 -2.69 -0.5 -0.73 0.25 0.38 0.49 0.56 0.17 0 -0.7 -0.95 -0.83 -1.17 0.18 -0.56 -0.28 0.07 0.03 0.53 -0.08 0.53 -0.1 -0.16 -0.25 -0.24 0.08 0.05 0.59 -0.48 0.22 0.15 0.53 0 0.35 -0.01 -0.34 0 -0.56 0.07 0.25 0.38 0.2 0.51 0.02 0.06 0.11 0.75 0.71 0.28 -0.36 -0.05 0.59 0.74 0.33 0.18 0.2 0.32 -0.06 -0.23 -0.2 -0.08 0.3 0.08 -0.63 0.47 0.86 0.62 -0.11 0.06 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.03 0.41 -0.12 0.74 0.4 0.4 0.42 0.57 0.28 0.4 0.2 -0.62 0.14 -0.03 -0.34 0.1 0.2 -0.31 0.12 -0.13 -1.48 0.86 0.24 0.67 0.22 0.35 0.71 0.21 -0.13 -0.23 2.54 At4g25050 254102_at ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. 6 response to light | fatty acid biosynthesis


Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of fatty acids in plastids

1.54 5.54
At5g45930 0.643 CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. 0.34 -1.58 0.34 0.34 -0.04 -0.94 -0.72 -0.97 -2.94 -2.13 -0.46 -0.03 -3.74 -0.18 -0.82 -1.44 0.19 -0.13 -1.02 -0.19 -1.24 -1.63 -0.17 -0.13 -0.98 -0.35 0.02 0.16 0.16 -0.59 -0.59 0.4 0 0.24 -0.49 0.51 0.52 0.65 0.22 0.38 0.64 0.33 -0.19 -0.26 -1.6 0.21 0.72 -0.93 -0.86 -0.7 0.3 0.52 0.31 0.49 -0.21 0.27 -0.5 0.28 -0.74 0.39 -0.59 0.51 0.23 0.44 0.5 -0.14 -0.06 0.06 0.05 0.45 0.34 0.34 0.34 0.34 0.34 0.34 0.34 -1.03 0.78 0.43 0.48 0.42 0.3 0.18 0.34 0.34 0.34 0.34 0.34 0.34 0.44 0.44 0.32 0.28 0.1 0.12 0.34 0.34 0.34 0.34 0.34 0.34 0.33 0.3 -0.27 -1.27 -1.83 -1.85 0.34 0.34 0.34 0.34 0.34 0.34 0.61 0.16 -0.1 -0.79 -0.71 -1.06 0.34 0.34 0.34 0.34 0.34 0.34 0.04 0.52 0.41 0.15 0.17 0.17 0.09 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.21 -1.33 0.23 0.31 0.65 0.37 -0.07 -0.08 -0.06 0.49 0.34 0.34 0.34 0.34 0.34 0.34 -0.56 0.56 0.34 0.86 0.6 0.18 -0.79 -0.25 0.1 0.35 0.47 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.34 0.72 0.27 0.14 -0.5 -1.09 0.07 0.48 -0.4 0.27 0.33 -0.3 -2.02 -1.23 -3.77 1.52 -1.69 1.73 -0.21 0.24 0.34 0.21 0.34 -0.99 0.8 At5g45930 248920_at (m) CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. 6 chlorophyll biosynthesis | magnesium chelatase complex
chlorophyll biosynthesis
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown


2.08 5.50
At3g13120 0.642
30S ribosomal protein S10, chloroplast, putative -0.39 0.21 0.35 0.28 0.05 -0.22 0 -0.06 -1.66 -0.95 -0.34 -0.02 -2.29 -0.18 -0.56 -1.12 -0.02 0.13 -0.76 -0.23 -0.56 -0.89 0.08 0.08 -0.56 -0.25 0.28 0.09 0.13 -0.34 -0.36 0.07 0.35 0.13 -0.13 0.49 0.55 0.54 0.37 0.3 0.56 0.45 0.13 -0.19 -1.3 0.4 0.19 -0.63 -0.27 -0.35 0.1 0.46 -0.02 0.39 -0.24 0.32 -0.74 0.23 -0.76 0.3 -0.74 0.46 -0.02 0.28 0.37 0.11 -0.07 0.01 0.01 0.13 0.04 0.24 0.04 0.26 0.46 0.16 0.26 -0.26 0.32 0.24 0.16 0.02 -0.08 -0.18 0.24 0.06 0.26 0.18 0.38 0.18 0.15 0.07 0.15 0.02 -0.27 0.16 0.3 0.03 0.38 0 0.31 0.09 0.15 0.16 -0.28 -0.99 -1.73 -1.97 0.11 -0.16 -0.02 0.09 0.34 0.03 0.28 0.41 0.08 -0.45 -0.65 -0.75 0.34 -0.2 -0.14 -0.35 -0.12 -0.2 0.02 0.54 0.15 0.04 -0.15 -0.04 -0.04 0.25 0.32 -0.04 -0.22 0.26 0.27 0.17 0.3 0.08 -0.28 0.02 -0.48 0.34 0.3 0.11 -0.11 -0.21 0.05 0.14 0.33 0.45 0.17 0.22 -0.48 -0.05 0.3 0.36 0.61 0.43 0.35 0.03 -0.12 -0.19 -0.07 0.37 0.01 0.22 0.02 0 0.22 0.27 0.14 0.07 0.07 0.09 -0.06 -0.6 -0.41 -0.04 0.44 0.23 0.26 0.23 -0.11 0.65 0.26 0.42 0.26 0.43 -0.15 0.01 -0.19 -0.76 -0.17 0.41 0.01 -0.03 0.31 -0.13 -0.12 -0.68 -1.6 1.33 0.37 1.42 0.18 0.1 0.53 0.02 0.39 -0.5 1.13 At3g13120 257190_at
30S ribosomal protein S10, chloroplast, putative 4


Ribosome



1.23 3.71
At5g52100 0.642
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) -0.7 -0.2 0.31 0.31 0.06 0.31 0.31 0.95 -1.87 -1.36 -0.22 -0.15 -2.63 -0.02 -1.05 -1.41 -0.15 -0.01 -1.12 -0.27 -0.61 -0.94 -0.06 -0.03 -0.52 -0.08 0.4 -0.06 -0.2 -0.33 -0.41 0.15 0.05 -0.03 -0.59 0.31 0.45 0.56 0.31 0.28 0.68 0.44 0.06 -0.28 -1.62 0.38 0 -0.79 -0.69 -0.65 0 0.7 0.05 0.51 -0.33 0.22 -0.89 0.37 -0.87 0.13 -0.84 0.55 -0.25 0.13 -0.21 -0.34 -0.04 0.14 -0.22 0.07 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.81 0.11 0.17 0.63 0.48 0.37 0.06 0.31 0.31 0.31 0.31 0.31 0.31 0.62 0.37 0.57 0.28 -0.22 0 0.31 0.31 0.31 0.31 0.31 0.31 0.61 0.18 -0.42 -1.03 -2 -2.15 0.31 0.31 0.31 0.31 0.31 0.31 0.42 0.2 0.05 -0.46 -0.8 -1.12 0.31 0.31 0.31 0.31 0.31 0.31 0.35 0.16 0 0.33 0.2 0.19 -0.15 0.05 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 -0.5 -0.28 -0.68 0.71 0.86 0.27 -0.1 -0.72 -1.4 0.31 0.31 0.31 0.31 0.31 0.31 0.11 0.77 0.31 0.67 0.5 0.44 0.38 0.61 0.35 0.34 0.61 0.31 0.31 0.31 0.16 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 0.24 -0.42 -1.04 -0.48 -0.14 -0.12 0.35 0.34 -0.14 -2.15 -1.93 -1.87 0.12 -0.57 1.26 0.16 0.65 0.31 -0.53 0.31 -2.25 0.31 At5g52100 248402_at
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) 2

lysine biosynthesis I Lysine biosynthesis Biosynthesis of Amino Acids and Derivatives | Lysin from aspartate


1.99 3.89
At1g01080 0.641
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative -0.53 0.05 0.25 -0.07 -0.1 -0.51 -0.35 -0.2 -1.83 -1.17 -0.46 -0.27 -2.48 -0.39 -0.84 -1.28 -0.12 -0.14 -0.82 -0.28 -0.83 -0.98 0.05 -0.34 -0.52 -0.16 0.1 0.03 -0.19 -0.19 -0.56 -0.12 0.05 0.08 -0.4 0.39 0.39 0.33 0.25 0.26 0.39 0.27 0.01 0.04 -0.98 0.15 -0.24 -0.35 -0.41 -0.37 -0.04 0.31 -0.23 0.13 -0.38 0.11 -1.05 0.16 -1.06 0.11 -0.75 0.22 -0.28 0.49 0.33 -0.07 -0.17 0.04 0.13 -0.08 0.38 0.07 0.23 0.41 0.32 0.26 0.63 -0.75 0.25 0.31 0.61 0.54 0.3 0.07 0.52 0.11 0.38 0.31 0.19 0.63 0.21 0.42 0.37 0.46 0.25 -0.02 0.02 0.41 0.44 0.64 0.5 0.62 0.05 0.3 -0.48 -1.19 -1.67 -1.98 0.54 0.44 0.28 0.63 0.44 0.48 0.12 0.21 -0.08 -0.65 -0.66 -1.09 0.3 0 -0.35 -0.42 0.42 0.49 0.1 0.66 0.28 0.23 0.16 0.01 0.08 -0.15 0.02 0.31 0.27 0.26 0.45 0.46 0.34 -0.31 -0.56 0.17 -0.59 0.54 0.35 0.07 -0.1 -0.55 -0.36 0.22 0.3 0.17 0.79 0.15 -0.1 -0.56 0.11 0 0.67 0.55 0.03 -0.79 -0.26 0.22 0.34 0.08 0.38 0.56 0.14 0.3 0.28 0.64 0.57 0.37 -0.38 -0.67 -0.63 -0.83 0.21 0.26 0.56 0.39 0.56 0.4 0.12 0.59 0.5 0.51 0.46 0.76 0.1 0.16 -0.15 -0.65 -0.11 -0.04 0.32 0.03 -0.01 -0.22 -0.1 -0.75 -2.94 1.87 0.76 1.4 0.49 0.08 0.06 0.3 0.23 -1.25 1.53 At1g01080 261577_at
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 4



mRNA processing in chloroplast


1.68 4.81
At2g36990 0.638 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -0.9 0.05 0.26 -0.28 -0.14 -0.42 -0.37 -0.46 -1.78 -1.03 -0.44 -0.18 -2.65 -0.03 -1.19 -1.05 -0.54 -0.09 -0.6 -0.49 -1.04 -0.74 0.15 -0.27 -0.56 -0.07 0.28 0.51 -0.07 -0.5 -0.42 0.03 0.15 -0.1 -0.9 0.4 0.39 0.34 0.18 0.31 0.37 0.53 -0.02 -0.26 -1.15 0.28 -0.26 -0.97 -0.17 -0.15 -0.02 0.33 0.13 0.14 -0.08 0.16 -1.14 0.3 -1.06 -0.01 -0.73 0.44 -0.01 0.71 0.01 -0.28 -0.22 0.26 0.33 0.26 0.17 0.2 -0.39 0.11 0.04 0.2 0.72 -1.18 0.22 0.25 0.22 0.19 0.26 0.07 0.13 -0.16 0.3 0.24 0.16 0.43 0.26 0.39 0.33 0.28 0.23 0 0.17 -0.02 0.12 0.36 0.25 0.53 0.24 0.44 -0.57 -0.59 -0.83 -1.07 0.47 0.02 0.03 0.41 0.83 0.02 0.28 0.28 -0.07 -0.23 -0.02 -0.31 0.53 0.21 -0.23 -0.23 0.21 0.22 -0.16 0.75 -0.06 0.22 -0.14 0.22 0.21 -0.08 0.35 0.24 -0.14 0.36 0.24 0.28 0.15 -0.42 -1.06 0.22 -0.16 0.15 0.22 0.21 0.17 -0.03 -0.35 0.56 0.28 0.63 0.5 0.35 0.28 -0.74 -0.05 0.26 0.64 -0.06 -0.1 0.23 0.35 0.3 0.18 0.14 0.19 0.37 -0.13 0.01 0.25 0.51 0.43 0.21 -0.05 0.17 0.15 0.08 0.33 -0.02 0.53 0.2 0.23 0.76 -0.06 0.85 0.25 0.53 0.61 0.71 0.2 0.3 -0.19 -0.69 0.1 0.05 -0.28 -0.08 0.28 0.16 -0.9 -0.05 -2 0 -0.88 1.48 0.95 0 0.26 0.71 -0.21 -1.51 1.35 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


1.72 4.12
At3g25920 0.637 RPL15 50S ribosomal protein L15, chloroplast (CL15) -0.84 0.15 0.36 0.28 -0.01 -0.3 0.08 -0.11 -1.49 -0.84 -0.15 0.25 -2.77 -0.18 -0.36 -1.07 0.2 -0.03 -0.79 -0.11 -0.56 -1.11 0.01 -0.04 -0.47 -0.36 0.21 0 0 -0.21 -0.62 -0.22 0.25 0.09 -0.11 0.32 0.45 0.4 0.11 0.21 0.68 0.46 -0.06 -0.35 -1.44 0.18 0.37 -0.54 -0.55 -0.46 0.1 0.31 -0.11 0.24 -0.38 0.19 -0.76 0.25 -0.66 0.16 -0.61 0.23 -0.02 0.38 0.35 -0.04 -0.24 -0.1 -0.05 0.1 0.12 0.14 0.02 0.19 0.36 0.09 0.25 -0.28 0.35 0.12 0.07 -0.09 -0.21 -0.34 0.18 -0.08 0.1 0.28 0.08 0.2 0.28 -0.03 0.12 0.15 -0.09 -0.23 0.21 0.26 0.93 0.69 0.44 0.46 0.32 0.42 -0.02 -0.43 -1.43 -2.15 0.38 0.1 0.34 0.33 0.33 -0.04 0.32 0.35 0.16 -0.32 -0.37 -0.75 0.59 0.27 0.15 0.36 -0.09 -0.18 0 0.36 0.15 -0.02 -0.08 -0.18 -0.2 -0.33 0.22 0.15 0.18 0.16 0.19 0.05 0.02 0.04 -0.36 -0.03 -0.18 0.26 0.24 -0.08 -0.17 -0.47 0.17 0.22 0.12 0.31 0.17 -0.17 -0.43 -0.13 0.11 0.35 0.46 0.14 0.19 0.09 -0.05 -0.34 -0.25 0.05 0.27 0.19 0.03 0.44 0.1 0.3 0.24 0.23 0.17 0.1 -0.18 -0.32 -0.28 -0.14 0.43 0.32 0.21 0.42 0 0.51 0.28 0.32 0.14 0.59 0.5 0.06 0.18 -0.59 -0.21 0 -0.1 0 0.33 -0.12 -0.05 -0.47 -2.15 1.48 1.19 1.02 0.41 0.14 0.5 -0.05 -0.05 -0.47 1.51 At3g25920 258076_at RPL15 50S ribosomal protein L15, chloroplast (CL15) 6 protein biosynthesis | protein biosynthesis | plastid large ribosomal subunit

Ribosome



1.27 4.28
At3g25660 0.635
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 0.15 0.14 0.21 0.22 0.11 -0.03 0.08 -0.02 -1.1 -0.68 -0.31 0.04 -1.64 -0.41 -0.52 -1.12 -0.15 0.12 -0.63 -0.22 -0.59 -0.69 -0.13 -0.41 -0.21 -0.28 -0.01 -0.26 0.01 -0.07 -0.57 -0.21 0.1 0.12 -0.27 0.28 0.54 0.25 0.28 0.02 0.09 0.16 -0.07 -0.26 -1.02 0.17 0.33 -0.57 -0.56 -0.54 0.28 0.35 -0.09 0.23 -0.28 0.15 -0.93 0.21 -0.82 0.04 -0.86 0.3 -0.32 0.64 0.28 -0.03 -0.23 0.02 0.15 -0.01 0.31 0.28 -0.08 0.34 0.44 -0.04 0.25 -0.61 0.34 0.15 0.4 0.14 0.26 -0.25 0.21 0.15 0.15 0.33 -0.03 0.42 0.25 0.24 0.36 0.17 -0.1 -0.28 -0.01 0.18 0.31 0.42 -0.05 0.06 0.06 0.14 -0.54 -1.09 -1.55 -2.04 0.11 0.11 0.28 0.23 -0.14 -0.2 -0.04 0.25 -0.1 -0.44 -0.42 -0.99 0.16 0.15 0.14 0.38 -0.34 -0.23 -0.27 0.93 0.09 0.03 0.17 -0.05 0.06 -0.15 0.41 0.25 0.11 0.36 0.36 0.19 0.52 0.08 -0.48 0.08 -0.38 0.68 -0.26 0 -0.14 -0.11 -0.7 0.34 -0.12 -0.07 0.09 0 -0.2 0.04 0.44 0.06 1.22 0.66 0.28 -0.09 0.16 0 0.24 0.3 0.68 0.22 0.12 0.05 0.45 0.38 0.43 0.56 0.07 -0.15 0.06 -0.18 -0.06 -0.1 0.31 0.3 0.48 0.13 0.28 0.32 0.21 -0.04 0.24 0.95 0 0.27 0.02 -0.77 0.03 -0.34 -0.03 0.16 0.26 -0.09 -0.57 -0.07 -0.16 0.05 -0.17 1.38 0.22 0.17 0.28 0.1 0.31 -0.47 0.96 At3g25660 256728_at
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 2


Other translation factors



1.31 3.43
At5g13510 0.635
ribosomal protein L10 family protein -0.48 0.13 0.06 0.64 0.26 -0.08 0.28 0.14 -1.46 -0.67 -0.16 0.11 -1.88 -0.23 -0.63 -1.03 0.03 -0.01 -0.47 -0.07 -0.59 -0.65 0.01 -0.12 -0.38 -0.03 0.26 0.02 0.05 -0.16 -0.38 -0.18 0.18 0.06 -0.3 0.38 0.37 0.41 0.22 0.17 0.37 0.32 0.06 -0.17 -1.11 0.03 0.35 -0.38 -0.42 -0.36 0.05 0.41 -0.08 0.23 -0.26 0.35 -0.89 0.31 -0.73 0.1 -0.7 0.25 -0.09 0.26 0.28 0.05 -0.17 -0.1 0.16 0.17 -0.12 -0.02 0.03 0.34 0.19 -0.08 0.17 -0.37 0.41 0.12 0.27 0.07 0.19 0.01 0.02 0.18 0.42 0.07 0.1 0.16 0.13 -0.05 0.24 -0.07 -0.08 -0.05 0.06 0.02 0.11 -0.04 -0.01 0.3 0.28 0.25 -0.41 -1.27 -1.49 -1.6 -0.16 -0.34 -0.01 -0.21 0.04 0.05 0.3 0.25 0.03 -0.53 -0.32 -0.56 -0.07 -0.38 -0.98 -1.39 -0.39 -0.32 0.02 0.54 0.18 0.04 0.12 -0.19 0.18 0.16 0.04 -0.15 -0.3 0.39 0.3 0.21 0.4 0.05 -0.63 0.3 0.09 0.47 0.48 0.19 -0.03 -0.04 -0.24 0.16 0.24 0.48 0.12 -0.16 -0.56 -0.12 0.53 0.18 0.64 0.51 0.25 0.08 0.09 0 0.21 0.43 0.4 0.09 0.09 0.52 0.57 0.38 0.44 0.31 -0.18 -0.06 0.24 0.19 0.11 0.08 0.57 0.08 0.32 0.27 0.05 0.49 0.17 0.17 0.27 0.42 0.17 0.08 0.04 -0.77 -0.08 0.08 -0.07 0.04 0.22 -0.04 0.05 -0.69 -2.46 1.48 0.73 1.68 0.44 -0.01 0.17 -0.01 0.07 -0.36 1.87 At5g13510 245852_at (m)
ribosomal protein L10 family protein 2
protein synthesis | ribosome biogenesis
Ribosome



1.32 4.33
At5g48220 0.635
indole-3-glycerol phosphate synthase, putative -0.27 0.06 -0.03 0.64 -0.37 -0.43 -0.13 -0.22 -1.28 -0.8 -0.28 -0.23 -1.33 -0.24 -0.56 -0.68 -0.06 -0.31 -0.83 -0.23 -0.62 -0.59 0.07 -0.06 -0.48 -0.24 0.19 0.09 0.09 -0.4 -0.46 0 0.01 0.17 -0.17 0.1 0.21 0.31 -0.05 0.26 0.45 0.83 0.46 -0.08 -0.86 0.31 0.47 -0.76 -0.49 -0.27 0.11 0.2 -0.17 0.07 -0.36 0.02 -1.03 0.1 -0.77 0.16 -0.79 0.21 -0.08 0.36 0.34 -0.14 -0.06 0.07 0.01 -0.11 0.33 0.25 0.04 0.37 0.11 0.13 0.27 -1.08 0.25 0.23 0.13 -0.14 -0.13 -0.43 0.51 0.39 0.21 0.13 0.11 0.1 0.06 0.1 0.3 -0.01 -0.2 -0.15 0.41 0.35 0.17 0.02 0.28 -0.07 0.18 0.37 -0.37 -1.05 -1.22 -1.61 0.33 0.24 0.34 -0.02 0.56 0.07 0.23 0.11 -0.25 -0.88 -0.85 -1.15 0.41 0.26 0.33 0.25 0.28 -0.17 -0.02 0.14 0.11 0.22 -0.18 -0.19 -0.13 -0.43 0.46 0.09 0.28 0.02 0.09 0.21 -0.03 -0.35 -1.18 0.39 0.83 0.14 0.2 0.31 0.1 0.31 0.24 0.06 0.1 0.03 -0.08 0.33 0.02 -0.49 0.54 0.01 0.31 0.18 0.16 -0.14 -0.37 -0.25 0.01 -0.03 0.09 0.54 0.31 0.44 0.45 0.42 0.45 -0.05 -0.18 0.1 -0.05 0.54 0.88 0.37 0.73 0.56 0.44 0.5 0.21 0.46 0.04 0.39 0.09 0.37 0.26 0.15 0.15 -0.62 0.01 -0.14 -0.19 0.17 0.31 -0.01 -0.69 -0.1 -2.18 0.99 0.49 1.26 0.12 -0.17 0.51 -0.06 0.08 -0.36 1.42 At5g48220 248688_at
indole-3-glycerol phosphate synthase, putative 6 indole-3-glycerol-phosphate synthase activity | tryptophan biosynthesis
tryptophan biosynthesis Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | Trp biosyntesis
1.40 3.60
At1g55490 0.631 CPN60B encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. -1.13 -0.11 0.3 1.45 0.34 -0.1 0.04 0.01 -2.02 -1.56 -0.15 -0.02 -3.33 -0.32 -0.63 -0.92 -0.23 -0.27 -0.91 -0.07 -0.98 -1.07 -0.18 -0.19 -0.8 -0.24 0.49 -0.01 0.04 -0.35 -0.85 0.07 0.44 -0.27 -0.39 0.48 0.46 0.3 0.15 0.32 0.7 0.87 0.23 0.07 -1.52 0.28 0.18 -0.61 -0.73 -0.4 0.14 0.4 -0.12 0.23 -0.38 0.41 -0.76 0.5 -0.73 0.41 -0.62 0.32 -0.14 0.63 0.63 0.16 -0.23 0.23 0.31 0.28 0.09 0.06 0.01 0.36 -0.11 -0.17 0.08 -0.3 0.7 0.38 0.23 -0.09 0.04 -0.06 0.2 0.06 0.14 0.1 0.08 0.01 0.38 0.12 0.17 -0.1 -0.23 -0.07 0.43 -0.11 0.28 -0.02 -0.17 -0.61 0.41 0.54 -0.17 -1.53 -1.96 -2.34 0.33 0.06 0.19 -0.4 -0.79 -1.12 0.32 0.32 -0.03 -0.71 -0.52 -0.83 0.24 -0.15 -0.21 -0.71 -0.96 -0.79 -0.16 0.8 0.49 0.26 -0.05 -0.28 0.09 -0.15 0.51 0.32 0 0.18 0.1 0.28 0.31 0.05 -1.28 0.7 0.36 0.57 0.27 0.38 0 -0.09 0.45 0.28 0.07 0.35 0.19 0.23 0.56 -0.45 0.39 0.07 0.72 0.28 0.21 0.21 0.6 -0.14 0.03 0.32 0.28 0.23 -0.09 -0.2 0.07 0.09 0.42 0.47 0.13 -0.02 -0.07 0.04 0.28 -0.12 1 0.62 0.38 0.59 0.18 1.37 0.17 0.2 0.22 0.88 0.59 0.37 0.41 -0.28 0.1 0.07 -0.07 -0.66 0.02 0.67 -0.98 0.1 -3.31 0.76 0.06 2.76 0.36 0.07 0.61 0.28 0.06 -0.65 3.98 At1g55490 265076_at CPN60B encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. 10 chaperone cofactor dependent protein folding | cell death | systemic acquired resistance | protein folding


Protein folding / chaperonins (chloroplast)


1.79 7.32
At4g34190 0.629
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. -1.3 0.13 0.42 0.77 -0.19 -0.24 0.08 -0.07 -1.28 -0.74 -0.17 0.07 -1.66 -0.18 -0.41 -1.36 -0.03 -0.06 -0.63 -0.07 -0.48 -0.84 0.06 0.07 -0.27 -0.21 0.06 0 0.05 -0.15 -0.46 -0.01 0.31 0.02 -0.06 0.28 0.25 0.24 0.15 0.12 0.31 0.31 0.04 -0.32 -1.17 0.19 0.31 -0.57 -0.43 -0.33 0.2 0.33 0.04 0.27 -0.28 0.26 -0.67 0.24 -0.55 0.23 -0.53 0.36 0.07 0.24 0.17 0.08 0.13 -0.16 -0.1 0 0.26 0.09 0.08 0.34 0.39 0.45 0.23 -0.22 0.25 0.13 0.13 -0.11 -0.09 -0.07 -0.11 0.03 0.34 0.24 0.17 0.21 -0.03 -0.04 0.15 -0.09 -0.05 0.1 0.06 -0.12 0.41 0.1 0.34 0.03 -0.02 0.08 -0.09 -0.57 -0.95 -1.01 -0.59 0.13 0.67 0.56 0.92 0.47 0.07 0.16 0.17 -0.19 -0.38 -0.31 0.19 -0.11 -0.17 -0.05 0.24 0.07 0.22 0.45 0.03 -0.03 -0.09 -0.18 -0.24 0.05 0.28 -0.23 -0.28 0 0.07 0.23 -0.13 0.07 -0.3 -0.14 0.05 0.2 0.22 0.16 -0.09 -0.21 -0.08 0.33 0.49 0.25 0.16 0 -0.91 -0.34 0.28 0.01 0.51 0.27 0.36 -0.1 -0.34 -0.28 -0.03 0.26 0.18 0.06 -0.19 -0.21 -0.26 0.11 0.39 -0.02 0.41 0.22 -0.03 -0.02 0.33 0.48 0.05 0.25 0.27 0.33 0.45 0.79 0.41 0.38 0.41 0.46 0.18 0.15 0.1 -0.61 -0.19 0.18 -0.16 0.1 0.16 -0.46 0.1 -0.96 -2.49 1.75 0.17 0.89 -0.05 0.11 0.01 -0.21 -0.11 -0.03 1.39 At4g34190 253272_at
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. 8 response to high light intensity | chlorophyll binding


Photosystems | additional photosystem II components | Early light-inducible proteins


1.25 4.24
At4g31850 0.628 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs -0.84 0.24 0.25 -0.4 -0.22 -0.68 -0.41 -0.42 -1.5 -0.82 -0.57 -0.09 -1.79 -0.61 -0.96 -1.3 -0.44 0.06 -0.55 -0.37 -0.83 -0.78 -0.04 -0.24 -0.62 -0.07 0.14 0.05 -0.01 -0.51 -0.41 0.16 0.07 -0.09 -0.34 0.28 0.22 0.14 0.05 0.33 0.24 -0.01 -0.34 -0.32 -1.02 -0.13 -0.66 -0.89 -0.57 -0.45 -0.04 0.48 0.08 0.23 -0.14 -0.04 -1.22 -0.01 -1.09 0.12 -0.92 0.49 -0.12 0.01 0.2 -0.24 -0.09 0.25 -0.04 0.1 0.2 0.43 0.47 0.36 0.19 0.15 0.56 -1.34 0.3 0.34 0.2 0.16 -0.1 -0.57 0.52 0.21 0.37 0.22 0.35 0.54 0.41 0.01 0.45 0.32 -0.34 -0.18 0.22 -0.14 0.56 0.47 0.3 0.19 0.26 0.21 -0.77 -0.79 -1.92 -1.41 0.78 0.65 0.4 0.56 0.47 0.66 0.33 0.2 -0.15 -0.59 -0.93 -0.98 0.47 0.42 -0.19 0.04 0.61 0.02 0.02 0.53 -0.01 -0.07 -0.1 0.17 -0.14 0.02 -0.15 0.02 0.11 0.13 0.35 0.66 0.43 -0.63 -1.19 0.34 0.06 0.53 0.25 0.16 -0.12 -0.3 -0.1 0.56 0.59 0.65 0.6 0.63 0.56 -0.89 -0.22 0.05 0.53 0.49 -0.25 -0.76 0.55 0.67 0.31 0.14 0.17 0.64 -0.22 0.52 -0.07 0.69 0.57 0.65 -0.23 0.48 0.84 0.6 0.44 0.3 0.09 0.26 0.2 0.56 0.35 0.52 0.38 0.6 0.55 0.6 0.44 0.39 -0.09 -0.87 -0.37 -0.1 0.16 0.09 0.19 0.43 -1 -0.35 -2.29 0.65 0.75 2 0.19 0.04 0.42 0.28 0.83 -1.11 0.54 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


1.69 4.31
At3g44890 0.624 RPL9 50S ribosomal protein L9, chloroplast (CL9) -0.38 -0.02 0.33 0.16 0.03 0.17 0.46 0.42 -1.67 -1.26 -0.09 -0.05 -2.75 -0.19 -0.45 -1.13 0.12 -0.24 -1.12 0.07 -0.95 -1.32 -0.15 -0.31 -0.76 -0.39 0.3 -0.11 -0.13 -0.45 -0.92 0.1 0.3 0.08 -0.38 0.37 0.42 0.51 0.13 0.13 0.57 0.44 0.05 -0.28 -1.45 0.23 0.36 -0.55 -0.85 -0.67 0.18 0.31 -0.19 0.21 -0.4 0.24 -0.69 0.39 -0.45 0.21 -0.6 0.27 -0.02 0.55 0.33 -0.04 -0.2 -0.19 -0.11 -0.06 0.61 0.3 0.36 0.28 0.21 0.04 0.49 -0.17 0.55 0.15 0.63 0.47 0.42 0.32 0.39 0.03 0.3 0.18 0.28 0.34 0.24 0.3 0.39 0.14 -0.04 -0.11 0.31 0.45 0.59 0.34 0.11 0.16 0.09 0.26 -0.17 -1.34 -1.89 -2.46 -0.09 -0.17 0.06 0.05 -0.12 -0.25 0.15 0.28 0.09 -0.66 -0.56 -0.74 0.3 0.19 -0.4 -0.63 -0.48 0.03 -0.06 0.53 0.42 0.24 0.2 -0.11 -0.05 0.06 0.23 0.26 0.32 0.11 0.21 0.34 0.56 0.06 -0.73 0.22 0 0.56 0.33 0.14 0.03 -0.2 0.1 0.03 0.11 0.59 0.21 -0.08 0 -0.08 0.53 -0.17 0.74 0.63 0.4 0.24 -0.07 -0.02 0.06 0.44 0.79 0.31 0.14 -0.25 0.04 0.56 0.35 0.5 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.18 0.43 0.24 0.71 0.34 0.12 0.35 0.51 0.06 0.17 -0.06 -0.8 -0.26 0.05 -0.02 0.1 0.39 -0.16 -0.1 -0.4 -1.49 0.24 -1.02 0.82 0.07 -0.02 0.28 -0.14 -0.56 -0.67 1.95 At3g44890 246339_at RPL9 50S ribosomal protein L9, chloroplast (CL9) 6 protein biosynthesis | plastid large ribosomal subunit protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



1.62 4.70
At3g48730 0.624
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) -0.81 NA 0.46 1.41 -0.06 -0.31 -0.1 0.03 -1.9 -0.92 -0.36 -0.12 -2.7 -0.31 -0.73 -1.11 -0.11 0.06 -0.68 -0.31 -0.75 -0.76 0.05 -0.1 -0.62 -0.23 0.31 0.08 0.04 -0.3 -0.45 0.15 0.51 -0.02 -0.39 0.48 0.46 0.42 0.24 0.36 0.65 0.45 0.44 -0.09 -1.02 0.25 0.26 -0.53 -0.49 -0.13 0.18 0.45 -0.09 0.17 -0.27 0.28 -0.87 0.41 -0.74 0.15 -0.76 0.46 -0.16 0.54 0.38 -0.06 -0.22 -0.24 0.15 0 0.21 0.38 0.24 0.38 0.21 0.14 0.39 -0.48 0.61 0.37 0.66 0.32 0.3 0.14 0.46 0.38 0.19 0.02 0.15 0.07 0.48 0.51 0.57 0.12 0.1 0.02 0.25 0.31 0.31 0.16 -0.02 0.32 0.4 0.49 -0.14 -1.3 -1.73 -2.06 0.51 0.15 0 -0.27 -0.39 -0.34 0.3 0.31 0 -0.87 -0.69 -0.79 0.31 0.23 -0.21 -0.74 -0.6 -0.38 -0.37 0.64 0.46 0.37 0.34 -0.12 0.17 0.15 0.2 0.48 0.27 0.36 0.13 0.26 0.59 -0.13 -0.61 0.05 -0.19 0.27 0.18 -0.09 -0.37 -0.46 -0.21 0.22 0.27 0.21 0.05 -0.24 -0.03 -0.43 0.28 0.38 0.49 0.51 0.54 0.21 -0.35 -0.14 0.07 0.08 -0.02 0.43 -0.21 -0.49 -0.55 0.45 -0.18 0.11 0.24 0.23 -0.01 -0.23 0.17 0.35 0.38 0.56 0.12 0.56 0.46 0.61 -0.01 0.09 -0.06 0.47 0.21 0.17 -0.12 -1.03 0.15 0.21 0.01 0.08 0.27 0.22 -0.45 -0.41 -2.39 1.21 0.3 1.32 -0.01 -0.03 0.38 0.28 -0.09 -0.73 1.55 At3g48730 252318_at
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) 6 porphyrin biosynthesis secondary metabolism | biogenesis of chloroplast chlorophyll biosynthesis | biosynthesis of proto- and siroheme | biotin biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | glutamate degradation I Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
1.44 4.25
At4g04350 0.622
similar to Leucyl-tRNA synthetase (Bacillus subtilis) -0.79 -0.48 0.3 0.04 0.02 -0.16 0.28 0.02 -1.2 -0.81 -0.44 -0.11 -1.7 -0.44 -0.66 -0.91 -0.05 -0.08 -0.53 -0.24 -0.65 -0.73 -0.28 -0.04 -0.24 0 0.28 -0.09 -0.15 -0.1 -0.37 0.02 0.41 0.01 -0.09 0.48 0.36 0.06 0.43 0.3 0.24 0.16 -0.04 -0.34 -0.92 0.23 -0.51 -0.85 -0.19 -0.45 0.07 0.31 -0.18 0.12 -0.3 -0.17 -0.86 0.13 -0.89 0.05 -0.65 0.09 -0.25 0.07 0.19 -0.08 -0.44 0.5 0.42 0.25 0.52 0.27 -0.17 0.21 0.19 -0.35 0.03 -0.7 0.45 0.18 -0.08 0.22 -0.02 -0.31 0.54 0.13 0.44 -0.06 -0.17 0.32 0.03 -0.02 0.05 0.21 -0.11 -0.22 0.56 0.19 0.54 0.15 0.06 -0.06 0.33 0.14 -0.61 -0.76 -1.27 -1.77 0.31 -0.13 0.24 -0.05 0.09 0.09 0.3 -0.11 -0.1 -0.02 -0.25 -0.9 0.37 0.01 0.15 0.32 0.02 -0.22 -0.12 -0.06 0.04 -0.19 -0.23 0.34 0.4 -0.37 0.2 0.28 -0.16 -0.05 0 0.22 0.16 -0.55 -1.35 0.41 0.32 0.06 0.06 0.03 -0.18 0.13 -0.08 0.36 0.09 0.65 -0.02 -0.17 -0.22 -0.52 0.24 0.45 0.56 0.11 -0.36 -0.4 -0.09 -0.05 0.47 0.22 0.65 0.5 0.13 0.49 0.28 0.56 0.52 0.45 0.38 0.38 0.38 0.4 0.1 -0.02 0.08 0.33 0.38 0.52 0.36 0.61 0.18 0.28 0.45 0.31 0.3 -0.15 0.08 -0.32 0.16 -0.17 -0.15 0.28 0.1 0.28 -1.12 -0.28 -2.65 1.23 0.75 2.29 0.37 0.33 0.24 0.64 0.05 -0.24 2 At4g04350 255328_at
similar to Leucyl-tRNA synthetase (Bacillus subtilis) 2
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway Valine, leucine and isoleucine biosynthesis | Aminoacyl-tRNA biosynthesis



1.42 4.95
At5g36700 0.622
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) -2.75 0.33 0.24 0.05 0.03 -0.16 0.03 -0.04 -1.61 -1.05 -0.05 0.04 -2.36 -0.18 -0.42 -1.21 0.1 0.08 -0.65 0 -0.43 -0.9 -0.04 -0.03 -0.41 -0.18 0.17 -0.03 0.02 -0.07 -0.5 -0.08 0.16 0.01 -0.18 0.26 0.32 0.33 0.17 0.17 0.24 0.16 -0.21 -0.14 -1.46 0.17 -0.22 -0.44 -0.37 -0.52 0.28 0.28 0.16 0.24 -0.08 0.23 -0.63 0.17 -0.44 0.08 -0.32 0.43 0.1 0.2 0.26 0.19 0.13 0.16 0 0.38 0.57 0.25 0.25 0.36 0.12 0.14 -0.03 -0.48 0.19 0.2 0.25 0.12 -0.05 -0.07 0.1 -0.05 0.13 -0.39 0.06 -0.21 0.21 0.07 0.28 0.28 -0.06 0.14 -0.05 0.42 0.18 0.25 0.22 0.31 0.04 0.14 0 -0.49 -1.55 -2.12 0.38 0.75 0.41 0.35 0.22 0.41 0.28 0.38 0.3 -0.04 -0.46 -0.55 0.08 0.41 0.25 0.35 0.34 -0.1 0.22 0.39 0.04 0.09 0.1 0.17 0.01 0.16 -0.12 0.09 0.42 0.48 -0.15 -0.11 0.04 0.06 0.24 0.25 -0.64 0.01 0.22 0.46 0.35 -0.21 -0.51 -0.06 0.83 0.56 0.28 0.35 0.24 -0.34 0.26 -0.25 0.21 0.09 0.23 -0.1 -0.56 -0.38 0.01 -0.04 0.23 0.42 0.75 0.66 0.24 0.25 0.24 -0.1 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.28 0.14 0.43 0.21 -0.24 -0.05 -0.14 0.4 0.14 0.18 0.1 -0.43 -0.31 0.02 -0.05 0.14 0.17 -0.03 -0.24 -3.12 -3.51 1.17 0.56 2.38 0.59 0.24 0.24 -0.45 0.24 -0.9 2.06 At5g36700 249658_s_at (m)
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




1.41 5.89
At5g36790 0.622
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) -2.75 0.33 0.24 0.05 0.03 -0.16 0.03 -0.04 -1.61 -1.05 -0.05 0.04 -2.36 -0.18 -0.42 -1.21 0.1 0.08 -0.65 0 -0.43 -0.9 -0.04 -0.03 -0.41 -0.18 0.17 -0.03 0.02 -0.07 -0.5 -0.08 0.16 0.01 -0.18 0.26 0.32 0.33 0.17 0.17 0.24 0.16 -0.21 -0.14 -1.46 0.17 -0.22 -0.44 -0.37 -0.52 0.28 0.28 0.16 0.24 -0.08 0.23 -0.63 0.17 -0.44 0.08 -0.32 0.43 0.1 0.2 0.26 0.19 0.13 0.16 0 0.38 0.57 0.25 0.25 0.36 0.12 0.14 -0.03 -0.48 0.19 0.2 0.25 0.12 -0.05 -0.07 0.1 -0.05 0.13 -0.39 0.06 -0.21 0.21 0.07 0.28 0.28 -0.06 0.14 -0.05 0.42 0.18 0.25 0.22 0.31 0.04 0.14 0 -0.49 -1.55 -2.12 0.38 0.75 0.41 0.35 0.22 0.41 0.28 0.38 0.3 -0.04 -0.46 -0.55 0.08 0.41 0.25 0.35 0.34 -0.1 0.22 0.39 0.04 0.09 0.1 0.17 0.01 0.16 -0.12 0.09 0.42 0.48 -0.15 -0.11 0.04 0.06 0.24 0.25 -0.64 0.01 0.22 0.46 0.35 -0.21 -0.51 -0.06 0.83 0.56 0.28 0.35 0.24 -0.34 0.26 -0.25 0.21 0.09 0.23 -0.1 -0.56 -0.38 0.01 -0.04 0.23 0.42 0.75 0.66 0.24 0.25 0.24 -0.1 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.28 0.14 0.43 0.21 -0.24 -0.05 -0.14 0.4 0.14 0.18 0.1 -0.43 -0.31 0.02 -0.05 0.14 0.17 -0.03 -0.24 -3.12 -3.51 1.17 0.56 2.38 0.59 0.24 0.24 -0.45 0.24 -0.9 2.06 At5g36790 249658_s_at (m)
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) 4
phosphate metabolism superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




1.41 5.89
At2g35410 0.618
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) -1.74 0.02 -0.26 0.62 -0.02 -0.2 0.06 0.03 -1.12 -0.6 -0.22 -0.08 -1.72 -0.1 -0.64 -0.88 -0.02 -0.06 -0.53 -0.12 -0.52 -0.81 0.01 -0.24 -0.38 -0.17 0.04 -0.1 -0.12 -0.25 -0.41 -0.2 0.19 0.06 -0.5 0.06 0.22 0.28 0.11 0.17 0.3 0.25 0.06 -0.07 -0.62 0.13 -0.02 -0.3 -0.27 -0.3 -0.17 0.16 -0.23 -0.07 -0.49 -0.09 -0.99 -0.04 -0.94 -0.01 -0.84 0.24 -0.31 -0.05 0.18 -0.08 -0.03 0.01 -0.06 -0.02 0.31 -0.05 0.12 0.28 0.61 0.23 0.46 -0.53 0.19 0.31 0.32 -0.05 0.02 -0.17 0.1 0.11 0.23 0.4 -0.05 0.23 0.18 0.32 0.23 0.03 -0.14 -0.2 0.06 0.16 0.61 0.35 0.31 0.49 0.33 0.26 -0.13 -0.94 -1.28 -1.39 -0.11 -0.12 0.37 0.48 0.64 0.55 0.43 0.28 -0.18 -0.83 -0.56 -0.8 -0.14 -0.28 -0.26 0.31 0.37 0.18 0.05 0.21 0.24 0.28 0.2 -0.15 -0.17 -0.26 -0.03 -0.27 -0.18 0.4 0.6 0.4 0.07 -0.14 -0.2 0.51 -0.42 0.69 0.1 0.22 -0.23 -0.61 -0.54 0.02 -0.13 0.11 -0.26 -0.45 -0.39 -0.3 0.27 0.06 0.64 0.46 0.36 -0.04 0.12 -0.26 0.2 0.23 0.17 0.19 0.8 1.56 0.8 0.48 0.56 0.27 -0.05 0.08 0.59 0.61 0.88 0.59 0.36 -0.08 0.05 0.26 0.26 1.03 0.5 0.36 0.53 0.12 0.31 0.24 0.35 -0.42 -0.05 -0.28 0.09 -0.35 0.14 -0.04 -0.02 -0.86 -1.57 1.15 0.26 1.04 0.53 0.02 0.23 -0.34 -0.01 -1.28 0.66 At2g35410 266642_at
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) 4



mRNA processing in chloroplast


1.49 3.30
At1g19150 0.617 LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) -3.91 0.36 0.43 0.43 -0.38 -0.95 -0.59 -0.4 -2.34 -1.76 -0.51 0.1 -4.54 -0.31 -0.96 -1.35 -0.23 -0.01 -1.08 -0.5 -0.74 -1.67 0.1 -0.16 -0.71 -0.4 0.25 -0.02 0.22 -0.54 -0.82 -0.04 -0.1 0.24 -1.06 0.33 0.51 0.56 0.23 0.35 0.56 0.19 -0.41 0.01 -2 0.48 -0.13 -0.93 -0.5 -0.62 0.2 0.76 0.18 0.46 -0.2 0.17 -0.96 0.31 -0.94 0.37 -0.86 0.87 0.01 -0.03 0.08 -0.2 -0.25 -0.26 -0.18 -0.18 0.43 0.43 0.43 0.43 0.43 0.43 0.43 -0.85 0.41 0.52 0.72 0.4 0.4 0.28 0.43 0.43 0.43 0.43 0.43 0.43 0.5 0.66 0.56 0.31 0.12 0.14 0.43 0.43 0.43 0.43 0.43 0.43 0.14 0.5 -0.03 -0.93 -2.16 -2.87 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.85 0.55 -0.03 -0.37 -0.77 0.43 0.43 0.43 0.43 0.43 0.43 0.44 0.46 0.56 0.89 0.62 0.39 0.09 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 -0.23 0.26 0.24 -1.52 0.9 0.88 0.56 0.42 -0.53 -1.7 0.43 0.43 0.43 0.43 0.43 0.43 0.22 1.04 0.43 0.67 0.88 1.01 0.42 0.35 0.36 0.44 0.55 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.43 0.23 0.27 0.36 -0.55 -1.65 -0.43 -0.14 -0.09 0.56 0.04 -0.31 -0.95 -4.79 -5.71 2.89 -1.81 1.27 0.41 0.17 0.43 -0.82 0.43 -2.34 0.43 At1g19150 256015_at LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) 10



Photosystems | Chlorophyll a/b binding proteins | light harvesting complex


2.45 8.60
At1g50450 0.617
expressed protein -0.71 0.15 0.15 0.79 -0.02 -0.27 0.02 -0.22 -0.95 -0.92 -0.23 -0.16 -1.59 -0.27 -0.44 -0.8 -0.09 -0.32 -0.64 -0.24 -0.81 -1.09 -0.42 -0.46 -0.7 -0.2 0.05 0.05 0.03 -0.45 -0.56 -0.08 0.2 -0.12 -0.05 0.49 0.25 0.07 -0.23 0.39 0.32 -0.09 -0.56 -0.45 -0.83 -0.05 -0.56 -0.64 -1.1 -0.71 -0.18 0.34 0.15 0.05 -0.3 0.23 -1.13 0.14 -0.86 0.16 -0.73 0.3 0.11 0.44 -0.23 -0.27 -0.53 -0.36 -0.12 -0.39 0.01 0.04 0.13 0.32 0.13 0.11 0.44 -0.32 -0.02 -0.02 0.45 0.47 0.48 0.21 0.26 0.04 0.15 -0.33 -0.1 0.34 0.02 0.17 0.27 0.37 0.27 -0.21 0.05 -0.18 0.02 0.07 0.03 0.19 -0.03 -0.05 0.07 -0.32 -0.75 -1.14 0.18 0.16 0.5 0.42 0.47 0.49 -0.11 0.23 -0.22 -0.45 -0.41 -0.64 0.18 -0.2 0.43 0.57 0.4 0.65 -0.08 0.69 0.42 0.49 0.64 0.38 0 -0.16 0.1 0.39 0.33 0.33 0.05 0.22 0.17 -0.31 -1.31 0.09 0.31 0.45 0.02 0.01 0.47 -0.28 -0.75 0.18 0.13 0.14 0.06 -0.02 0.32 0.22 0.7 -0.22 0.6 0.16 -0.02 -0.28 0.18 0.37 0.69 0.14 0.2 0.05 0.09 0.32 0.21 0.43 0.38 0.24 -0.06 -0.02 -0.43 0.55 0.9 0.99 0.44 -0.05 0.09 0.42 0.72 0.92 -0.16 0.21 0.02 0.55 0.13 0.18 0 -0.46 -0.11 -0.23 -0.11 -0.03 0.01 0.03 -0.34 0.1 -2.88 1.06 0.22 2.04 0.12 0.18 0.15 -0.02 -0.07 0.34 0.55 At1g50450 261861_at
expressed protein 1

dTDP-rhamnose biosynthesis




1.46 4.92
At3g63190 0.617
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); -0.52 0 0.23 1.07 -0.23 -0.4 -0.11 -0.19 -1.35 -1.34 -0.24 0.15 -2.72 -0.26 -0.86 -1.56 -0.08 -0.14 -0.83 -0.11 -0.87 -1.06 0 -0.28 -0.52 -0.17 0.04 -0.05 -0.01 -0.21 -0.56 -0.03 0.22 0.18 -0.48 0.37 0.43 0.34 0.23 0.26 0.44 0.17 0.16 -0.41 -1.4 0.14 0.03 -0.62 -0.74 -0.41 0.02 0.49 -0.24 0.32 -0.53 0.17 -0.87 0.32 -0.89 0.54 -0.83 0.28 -0.17 0.55 0.42 0.14 -0.15 -0.36 0.2 0.17 0.52 0.22 0.19 0.18 0.5 0.77 0.21 -0.43 0.33 0.48 0.76 0.38 0.44 0.27 0.46 0.24 0.31 0.32 0.17 -0.04 0.33 0.57 0.57 0.18 0.05 -0.1 0.26 0.39 0.49 0.42 0.24 -0.22 0.12 -0.01 -0.3 -1.38 -1.62 -1.93 0.35 0.16 -0.04 -0.17 0.23 0.17 0.06 0.42 0.16 -0.55 -0.54 -1.14 0.43 0.17 -0.14 0.08 0.13 -0.28 0.05 0.59 0.46 0.44 0.34 -0.45 -0.05 -0.03 0.17 0.3 0.54 0.51 0.39 0.42 0.31 0.11 -0.57 0.2 0.11 0.48 0.44 0.07 0.08 -0.05 0.11 0.44 0.21 -0.01 -0.09 0.08 -0.09 -0.33 0.23 0.3 0.88 0.56 0.48 0.3 -0.28 -0.14 0.38 0.38 0.35 0.16 -0.03 -0.05 0.57 0.37 0.49 0.24 -0.07 -0.27 -0.56 -0.63 -0.37 -0.06 0.17 0.23 0.12 0.1 -0.08 0.46 0.35 0.37 0.01 0.59 0.05 0.03 -0.04 -0.86 -0.02 0.27 -0.19 0.04 0.4 -0.01 -0.97 -0.28 -2.96 1.31 -0.04 2.31 0.09 -0.33 0.47 -0.12 0.06 -0.67 1.55 At3g63190 251172_at
similar to Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (Spinacia oleracea); 4
protein synthesis | biogenesis of chloroplast
Translation factors



1.58 5.29
At5g42310 0.617
pentatricopeptide (PPR) repeat-containing protein -1.14 0.23 0.08 0.57 -0.39 -0.91 -0.24 -0.28 -2 -1.01 -0.44 -0.31 -1.38 -0.1 -1.1 -1.14 -0.17 -0.15 -0.43 -0.37 -0.92 -0.73 0.05 -0.34 -0.49 0.16 0.15 0.05 -0.15 -0.45 -0.19 0.15 0.06 -0.18 -0.87 0.39 0.17 0.19 0.04 0.2 0.11 0.01 -0.07 -0.55 -1.19 -0.03 0.16 -0.97 -0.11 -0.06 0 0.54 0.07 0.27 -0.13 0.06 -0.94 -0.06 -0.96 -0.09 -0.88 0.4 -0.19 -0.06 -0.04 -0.45 0.13 -0.07 -0.27 -0.2 0.03 0.07 0.08 0.03 0.47 0.45 0.32 -1.24 -0.04 0.07 -0.08 -0.08 -0.25 -0.57 0.2 -0.33 0.27 0.68 0.36 0.01 -0.05 -0.07 0.2 0.14 -0.11 -0.18 0.01 -0.21 0.15 0.48 -0.01 -0.1 0.05 0.21 -0.23 -0.09 -0.63 -0.74 0.39 0.38 0.23 1.09 0.88 0.78 0.27 0.38 0.06 -0.05 -0.51 -0.8 0.75 0.62 -0.12 0.32 0.33 -0.04 0.08 0.33 -0.16 -0.01 -0.13 0.12 -0.14 -0.24 0.59 -0.01 -0.13 -0.02 0.67 0.39 -0.03 -0.59 -0.72 0.35 0.4 0.39 0.39 0.37 0.49 0.1 -0.31 0.33 0.53 0.57 0.93 0.85 1.12 -0.82 0.26 0.01 0.43 0.07 -0.53 -0.11 0.32 0.49 0.48 0.2 0.53 0.49 -0.05 0.96 0.47 0.77 0.75 0.48 0.62 0.62 0.71 0.04 0.04 -0.95 0.52 0.28 -0.12 0.33 0 0.61 0.5 0.44 0.32 0.26 0.13 -0.06 -0.26 -0.57 -0.41 -0.18 -0.43 0.1 0 0.21 -0.2 -0.64 -1.28 0.82 0.65 0.98 0.08 0.53 0.27 0.17 -0.08 -1.82 0.86 At5g42310 249247_at
pentatricopeptide (PPR) repeat-containing protein 2



mRNA processing in chloroplast


1.71 3.13
At3g24430 0.616 HCF101 encodes a MRP-like protein with a nucleotide-binding domain. -0.4 0.21 0.52 1.68 0.12 -0.11 -0.02 -0.09 -1.79 -0.97 -0.03 -0.08 -2.93 -0.2 -0.56 -0.99 0.02 -0.28 -0.74 -0.02 -0.7 -1 -0.14 -0.13 -0.64 -0.08 0.26 0.06 -0.05 -0.31 -0.32 0.24 0.17 0.14 -0.33 0.22 0.3 0.25 0.33 0.12 0.18 -0.04 -0.44 -0.16 -1.27 0.19 -0.03 -0.86 -0.52 -0.38 0.38 0.34 0.05 0.06 -0.28 0.17 -0.86 0.16 -0.96 -0.06 -0.76 0.35 0.06 0.34 0.24 0.17 -0.19 0 0.16 0.38 0.42 0.28 0.25 0.28 0.03 -0.03 0.19 -0.63 0.27 0.26 0.21 0.09 0.28 -0.15 0.37 0.18 0.53 0.01 0.05 -0.08 0.27 0.2 0.38 0.33 0.17 0.08 0.17 0.12 0.42 0.19 -0.03 0.05 0.06 0.23 -0.07 -0.94 -1.11 -1.69 0.38 -0.09 0.06 0.03 -0.11 0.12 0.26 0.3 0.19 -0.39 -0.59 -1.06 0.36 -0.13 -0.2 0.14 -0.37 -0.06 0.43 0.64 0.13 0.18 0.13 -0.09 0.12 0.18 0.53 0.02 -0.13 0.07 0.2 0.2 0.28 -0.12 -1.05 0.34 0.54 0.31 0.23 0.22 0.24 0.24 -0.16 0.33 0.35 0.44 0.44 -0.33 -0.05 -0.04 0.55 0.03 0.71 0.28 0.21 -0.48 -0.28 -0.06 0.51 0.33 0.69 0.3 -0.01 -0.43 0.07 0.51 0.27 0.09 0.08 0.12 0.04 -0.24 0.07 -0.18 0.35 0.55 0.57 0.18 0.12 0.75 0.33 0.24 0.21 0.7 0.03 0.15 0.05 -0.62 -0.16 -0.06 -0.15 0.1 0.27 0.17 -0.96 -1.26 -4.8 2.31 1.46 1.49 0.79 0.39 0.31 0.06 0.39 -0.54 -0.08 At3g24430 257168_at HCF101 encodes a MRP-like protein with a nucleotide-binding domain. 10



Thylakoid biogenesis and photosystem assembly


1.54 7.11
At1g48350 0.614
ribosomal protein L18 family protein -0.43 0.1 0.52 0.35 -0.01 -0.47 0.01 -0.13 -1.9 -1 -0.28 -0.02 -2.97 -0.19 -0.57 -1.23 0.01 0.03 -0.8 -0.14 -1.04 -0.99 -0.08 -0.04 -0.61 -0.13 0.22 0.15 0.16 -0.43 -0.48 0.04 0.24 0.2 -0.21 0.4 0.61 0.65 0.24 0.33 0.5 0.56 0.11 -0.26 -1.43 0.21 0.51 -0.64 -0.65 -0.45 0.19 0.43 -0.15 0.3 -0.5 0.26 -0.93 0.38 -0.82 0.16 -0.84 0.34 0 0.47 0.46 0.08 0.01 -0.06 0.07 0.22 0.06 0.46 0.18 0.84 0.3 0.24 0.37 -0.31 0.48 0.24 0.16 -0.08 -0.07 -0.32 0.16 0.08 0.34 -0.01 0.14 0.56 0.18 -0.02 0.08 -0.05 -0.43 -0.07 0.31 0.12 0.54 -0.01 0.06 0.01 0.23 0.25 -0.18 -1.22 -1.85 -2.37 0.22 0.07 0.17 -0.09 0.41 -0.01 0.33 0.28 0.13 -0.39 -0.55 -0.93 0.34 -0.15 -0.22 -0.67 -0.32 -0.28 0.04 0.61 0.05 -0.08 -0.18 -0.28 -0.07 0.05 0.32 -0.03 -0.23 0.18 -0.08 0.3 0.42 0.13 -0.39 0.05 -0.3 0.37 0.59 0.1 -0.32 -0.11 0.09 0.56 0.26 0.75 0.01 0.3 -0.11 -0.18 0.07 0.22 0.6 0.6 0.37 0.19 -0.3 -0.2 0.07 0.27 0.27 0.48 0.05 0.74 0.19 0.28 0.68 0.5 0.26 0.18 -0.06 -0.43 -0.34 0.06 0.56 0.67 0.43 0.51 0.15 0.67 -0.07 0.23 0.46 0.68 0.15 0.21 -0.22 -0.91 0 0.28 0.1 0.16 0.38 -0.35 -0.38 -0.34 -3.21 1.81 0.87 1.29 0.07 0.22 0.27 0.02 -0.03 -0.56 1.95 At1g48350 262235_at
ribosomal protein L18 family protein 2


Ribosome



1.60 5.16
At2g26930 0.614 ATCDPMEK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. -0.65 0.05 0.36 0.49 0.1 -0.12 0.11 0.03 -0.89 -0.67 -0.22 0.12 -0.86 -0.24 -0.24 -0.47 -0.08 -0.08 -0.27 -0.03 -0.27 -0.49 -0.09 0.05 0.03 0 0.28 -0.28 0.13 -0.03 -0.03 0 0.13 -0.01 -0.03 0.16 0.28 0.2 0.21 0.22 0.32 0.21 0.36 -0.02 -0.45 0.39 0.27 -0.54 -0.44 0.03 0.04 0.14 -0.13 0.1 -0.41 -0.05 -0.76 0.03 -0.89 0.09 -0.56 -0.03 -0.18 0.16 0.3 -0.22 -0.13 -0.04 -0.1 0.27 0.03 0.17 -0.03 -0.03 0.04 -0.06 0.22 -0.11 0.18 0.03 0.26 -0.06 0.2 0.02 0.16 0.09 0.02 -0.1 -0.04 0.17 0.11 0.07 0.21 -0.05 -0.04 0.12 0.2 0.11 0.02 -0.03 -0.03 0.07 0.31 0.22 -0.19 -0.88 -0.75 -0.8 0.03 0.27 -0.15 -0.24 0 0.22 0.09 0.04 0.28 -0.1 -0.07 -0.08 0.11 -0.18 0.05 0.2 -0.04 0.12 0.23 0.28 0.32 0.15 0.05 -0.19 -0.05 0.07 0.01 0.12 0.04 0.14 -0.06 0.08 0.22 -0.26 -0.01 0.03 0.25 0.4 0.19 0.01 -0.23 -0.64 -0.23 0.22 0.21 0.14 0.11 -0.08 -0.09 -0.05 0.53 0.07 0.51 0.33 0.21 0.33 0.12 -0.13 -0.03 0.31 0.21 0.25 -0.05 0.1 0.36 0.21 0.3 0.43 0.01 -0.05 -0.14 0 -0.06 0.12 0.23 0.25 0.23 0.05 0 -0.1 -0.01 0.02 0.04 0.26 0.16 -0.08 -0.17 -0.79 -0.06 0.15 -0.06 -0.22 0.03 -0.07 -0.22 -0.47 -0.5 0.3 -0.12 0.74 0.11 -0.06 0.28 -0.07 -0.07 -0.82 0.7 At2g26930 266863_at ATCDPMEK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 10


Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.98 1.64
At3g62910 0.614 APG3 Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development, similar to peptide chain release factor 1 (Escherichia coli) -1.89 -1.1 0.23 0.23 -0.98 0.23 0.23 0.23 -1.43 -1.43 -0.23 0.04 -2.27 -0.17 -0.94 -1.53 0 -0.2 -1.49 -0.11 -1.62 -1.67 -0.17 -0.44 -1.21 -0.45 0.1 0.03 -0.33 -0.76 -0.92 0.1 -0.1 0.11 -0.25 0.56 0.43 0.46 0.18 0.3 0.49 0.05 -0.12 -0.37 -1.61 0.3 -0.77 -0.84 -0.56 -0.38 -0.09 0.14 0.18 0.2 -0.24 0.16 -0.92 0.21 -0.86 0.35 -0.61 0.25 0.11 0.28 0.52 0.22 -0.09 -0.15 0.07 0.18 0.23 0.23 0.22 0.23 0.23 0.22 0.16 -0.7 0.26 0.31 0.22 -0.34 0.08 0.02 0.19 0.08 0.23 0.33 0.19 0.16 0.47 0.32 0.36 -0.05 0.04 -0.09 0.37 0.37 0.41 0.31 0.44 0.36 0.76 0.52 -0.51 -1.01 -0.83 -0.79 0.23 -0.01 0.23 0.23 0.11 0.16 0.35 0.28 -0.17 -0.56 -0.44 -0.46 0.56 0.22 0.23 0.23 0.22 0.16 -0.25 0.13 0.56 0.52 0.21 -0.62 -0.16 -0.11 0.3 -0.14 -0.01 0.15 0.31 0.45 0.21 -0.28 -1.7 0.16 0.34 0.98 0.72 0.11 -0.12 -0.26 0.03 0.23 0.22 0.28 0.23 0.22 0.16 -0.13 0.76 0.82 0.48 0.59 0.55 0.38 0.66 0.18 0.62 0.64 0.3 0.23 0.22 0.23 0.23 0.23 0.53 0.47 -0.2 -0.14 0 0.67 0.4 0.09 0.4 0.23 0.13 0.12 0.26 0.75 0.16 0.28 0.16 -0.02 0.12 0.26 0.04 -0.67 0.04 0.17 -0.38 0.08 0.31 0.34 -2.02 -0.2 -4.09 0.72 -1.8 3.71 0.46 2.59 0.23 0.21 -0.16 -0.23 2.68 At3g62910 251193_at APG3 Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development, similar to peptide chain release factor 1 (Escherichia coli) 2 chloroplast organization and biogenesis protein synthesis | translation
Translation factors



2.11 7.80
At2g33800 0.611
ribosomal protein S5 family protein -0.76 0.11 0.25 0.34 -0.02 -0.34 -0.02 -0.14 -1.72 -1.2 -0.3 -0.14 -2.42 -0.25 -0.49 -1.1 -0.19 -0.04 -0.72 -0.31 -0.89 -0.83 -0.07 -0.06 -0.48 -0.42 0.08 -0.12 0.2 -0.25 -0.69 -0.14 0.21 0.06 -0.13 0.31 0.46 0.41 0.27 0.19 0.43 0.32 0.02 -0.4 -1.4 0.21 0.16 -0.62 -0.55 -0.37 0.06 0.39 -0.23 0.42 -0.24 0.25 -0.83 0.39 -0.56 0.28 -0.66 0.32 -0.09 0.44 0.33 0.06 -0.28 -0.09 0.12 0.12 0.32 -0.05 0.09 0.37 0.37 0.15 0.28 -0.36 0.41 0.22 0.23 0.05 0.04 -0.01 -0.06 0.07 0.28 0.21 -0.09 0.44 0.5 0.24 0.28 0.23 -0.02 0.01 0.02 0.09 0.37 0.12 -0.01 0.07 0.24 0.26 -0.11 -0.66 -0.99 -1.35 0.04 0.1 0.42 0.22 0.34 0.15 0.42 0.32 0.05 -0.41 -0.37 -0.77 0.21 0.12 -0.24 -0.49 -0.31 -0.28 0.02 0.51 0.21 0.12 0.05 -0.05 0.04 0.19 0.34 -0.05 0.12 0.4 0.1 0.03 0.26 -0.03 -0.1 -0.07 -0.24 0.42 0.13 -0.07 -0.28 -0.35 0.2 0.13 0.16 0.18 -0.17 -0.1 -0.35 0.02 0.13 0.22 0.6 0.26 0.37 0.44 0.37 -0.02 0.05 0.26 0.67 0.25 0.28 0.49 0.46 0.35 0.17 0.37 0.02 -0.1 -0.12 -0.17 -0.1 -0.41 0.31 0.53 0.3 0.19 0.09 0.62 0.26 0.28 0.35 0.48 0.27 0.35 0.01 -0.6 -0.04 0.19 0.07 0.08 0.3 -0.11 -0.43 -0.74 -2.67 1.75 0.41 0.68 0.21 0.43 0.11 -0.19 0.15 -0.34 1.6 At2g33800 267435_at
ribosomal protein S5 family protein 2


Ribosome



1.25 4.42
At3g18680 0.611
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) -0.63 0.23 0.24 0.51 0.09 -0.1 0.2 -0.19 -1.29 -0.82 -0.61 0.08 -2.69 -0.62 -0.66 -0.84 -0.54 -0.06 -0.63 -0.43 -0.71 -0.46 -0.19 -0.04 -0.35 0.1 0.36 0.08 0.25 -0.05 0.03 0.3 0.43 0.02 -0.41 0.48 0.33 0.41 0.35 0.35 0.39 0.31 0.22 -0.19 -0.84 0.48 0.25 -0.83 -0.68 -0.04 0.03 0.31 -0.28 0.1 -0.56 0.15 -1.32 0.18 -1.28 0.05 -1.08 0.43 -0.38 0.43 0.45 0 -0.01 0.04 0.22 0.21 0.26 0.13 0.03 0.19 0.02 0.12 0.25 -0.7 0.62 0.2 0.63 -0.02 0 -0.06 0.25 -0.02 0.06 0.08 0.09 0.5 0.36 0.28 0.5 0.06 -0.4 -0.04 0.33 0.17 0.35 0.12 0.06 -0.08 0.57 0.49 -0.56 -1.79 -1.68 -1.37 0.37 0.02 0.13 -0.08 0.21 0.2 0.47 0.44 -0.03 -0.75 -0.41 -0.55 0.24 -0.07 0.1 0.04 -0.24 0.04 0.1 0.52 0.33 0.28 0.23 -0.15 -0.13 0.01 0.36 0.12 0.01 0.25 0.12 0.17 0.25 -0.12 -0.17 -0.05 0.02 0.64 0.64 -0.19 -1.06 -0.87 -0.55 0.15 0.19 0.23 -0.15 0.07 0.22 -0.46 0.84 0.27 0.91 0.66 0.45 -0.2 0.34 0.23 0.22 0.45 0.5 0.25 -0.18 0.09 0.06 0.17 0.33 0.38 0.09 0.08 0.08 0.17 -0.01 -0.25 0.51 0.3 0.31 0.28 -0.04 0.49 -0.12 -0.02 0.33 0.36 0.2 0.08 -0.45 -1.36 0.26 0.4 0.08 0.09 0.09 0.42 -0.59 0.32 -0.87 -0.81 -0.44 2.02 0.33 0.36 0.24 0.32 -0.09 -0.83 1.41 At3g18680 257756_at
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) 2

proline biosynthesis I | biosynthesis of pyrimidine ribonucleotides




1.39 4.71
At3g08740 0.609
elongation factor P (EF-P) family protein -0.94 0.15 0.12 0.86 -0.09 -0.26 0.12 0.11 -1.37 -0.81 -0.56 0.04 -2.17 -0.48 -0.44 -0.82 -0.24 -0.03 -0.57 -0.26 -0.89 -0.65 -0.09 -0.17 -0.21 -0.12 0.31 0.04 0.12 -0.09 -0.47 -0.03 0.21 -0.04 -0.39 0.35 0.43 0.45 0.13 0.11 0.64 0.83 0.67 -0.16 -1.12 0.27 0.14 -0.86 -0.59 -0.18 0.09 0.28 -0.2 0.14 -0.55 0.18 -1.1 0.28 -0.92 0.16 -0.86 0.26 -0.15 0.71 0.23 0.04 -0.31 -0.1 0.25 0.08 0.24 0.12 0.2 0.24 0.36 0.32 0.28 -0.2 0.33 0.21 0.21 0.03 0.12 0.01 0.18 0.23 0.22 0.26 0.34 0.36 0.02 -0.02 0.1 -0.23 -0.17 -0.24 0.13 0.16 0.13 0.07 0.12 0.04 0.4 0.39 -0.14 -1.31 -1.49 -1.98 0.17 0.39 0.26 0.12 0.19 -0.28 0.27 0.19 -0.09 -0.46 -0.35 -0.67 0.22 0.09 -0.31 -0.51 -0.22 -0.36 -0.09 0.72 0.2 0.14 -0.01 -0.25 -0.04 -0.3 0.3 0.13 0.36 0.23 0.21 0.22 0.02 -0.01 -0.51 0.28 -0.39 0.32 0.16 0 -0.26 -0.28 -0.11 0.13 0.24 -0.07 -0.31 -0.1 -0.69 -0.28 -0.01 0.04 0.72 0.19 0.43 0.31 0.22 -0.2 -0.08 0.15 0.35 0.33 0.45 0.8 0.55 0.52 0.45 0.24 0.28 0.32 0.13 0.21 0.13 0.17 0.44 0.11 0.31 0.03 0.11 0.32 0.41 0.39 -0.09 0.83 0.28 0.22 0.09 -0.48 0.15 0.16 -0.28 -0.1 0.25 0.06 0.68 0.25 -1.82 0.31 -0.42 1.29 0.49 -0.02 0.89 -0.03 0.03 -0.67 0.95 At3g08740 258674_at
elongation factor P (EF-P) family protein 2


Translation factors



1.54 3.46
At3g15850 0.608 FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. -0.13 0.37 0.03 1.36 -0.71 -0.98 -0.4 -0.52 -1.65 -0.88 -0.54 0.21 -2.33 -0.34 -1.11 -0.87 0.14 0.23 -0.62 -0.57 -1.03 -0.96 -0.03 -0.4 -0.85 -0.41 0.23 0.31 0.04 -0.92 -1.08 -0.23 -0.15 -0.01 -0.95 0.21 0.35 0.34 0.08 0.28 0.56 0.56 0.49 -0.26 -2.5 0.16 -0.5 -0.96 -0.49 -0.47 0.06 0.57 0.11 0.19 -0.22 -0.09 -1.24 -0.03 -1.15 -0.1 -0.89 0.38 0.09 0.23 0.22 0.03 0.33 0.56 0.59 0.94 0.26 0.12 0.45 0.55 0.48 0.24 0.35 -1.25 0.22 0.22 -0.05 -0.08 -0.09 -0.18 0.1 0.21 0.42 0.22 0.25 0.38 -0.05 -0.07 0.14 -0.02 -0.45 -0.08 0.3 0.43 0.7 0.32 0.33 0.15 0.21 -0.03 -0.88 -1.62 -2.88 -3.41 0.27 0.44 0.66 0.36 0.55 0.24 0.21 0.04 -0.37 -0.65 -1.36 -1.3 0.37 0.11 0.11 0.13 0.09 -0.05 0.16 0.43 -0.18 -0.03 -0.08 0.16 -0.07 -0.03 0.59 0.18 0.32 0.41 0.24 0.34 0.07 -0.77 -0.77 0.59 -0.68 0.27 0.63 0.75 0.83 0.53 -0.99 0.48 0.65 0.45 0.17 0.32 0.26 -0.05 0.34 0.28 0.43 -0.18 -0.16 0.55 0.49 -0.01 0.11 0.51 0.52 0.38 0.36 0.42 0.86 0.48 0.64 0.16 0.01 -0.36 -0.38 0.19 0.62 0.41 0.75 0.46 0.74 0.57 0.56 1.59 0.57 0.55 0.22 0.37 0.46 0.19 0.16 -0.25 0 0.2 -0.92 0 0.08 -0.31 -0.23 0.27 -0.45 0.85 0.39 1.04 0.17 0.28 0.54 0.5 -0.05 -1.13 1.51 At3g15850 258250_at FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 7 fatty acid desaturation | 16:0 monogalactosyldiacylglycerol desaturase activity | photoinhibition
glycosylglyceride desaturation pathway
Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.86 5.00
At5g63310 0.608 NDPK2 nucleotide diphosphate kinase II, Maintains intracellular dNTP levels except ATP, also plays a role in oxidative stress response. -0.66 -0.33 0.22 0.86 0.01 -0.1 0.19 0.04 -1.4 -0.97 -0.24 -0.25 -2.62 -0.52 -0.46 -0.76 -0.19 -0.26 -0.83 -0.24 -0.89 -0.85 -0.4 -0.02 -0.73 -0.5 0.28 -0.15 0.08 -0.63 -0.67 -0.05 0.23 -0.06 -0.04 0.36 0.17 0.47 0.12 0.25 0.73 0.78 -0.12 -0.47 -1.18 0.24 0.75 -0.53 -0.49 -0.44 0.03 0.17 -0.05 0.11 -0.33 0.07 -0.4 0.2 -0.31 0.1 -0.36 0.21 0.21 0.37 0.3 -0.33 -0.38 -0.23 0.24 -0.12 0.48 -0.02 0.14 0.04 0.05 0.1 0.16 -0.21 0.55 0.13 0.6 0.26 0.45 0.37 0.15 0.26 0.07 -0.08 0.09 0.05 0.48 0.23 0.38 0.01 0.1 -0.21 0.15 0.24 0.45 -0.05 -0.19 -0.36 0.25 0.35 -0.22 -1.5 -1.76 -2.49 0.24 0.22 0.12 -0.28 -0.55 -0.82 0.33 0.04 -0.06 -0.56 -0.23 -0.56 0.37 0.14 -0.18 -0.21 -0.17 0.15 -0.37 0.56 0.55 0.26 0.28 -0.15 0.24 0.03 0.38 0.28 0.36 0.35 -0.05 0.34 0.51 -0.25 -1.28 0.13 -0.04 0.54 0.13 0.12 -0.36 -0.22 -0.31 -0.02 0.09 0.32 -0.03 -0.03 -0.35 -0.32 0.62 0.5 0.55 0.28 0.28 0.3 0.19 -0.16 0.13 0.24 0.4 0.09 0.44 0.71 0.16 0.39 0 0.36 -0.17 0.34 0.14 0.55 0.64 0.67 0.62 0.32 -0.03 0.17 0.28 0.42 0.12 0.12 -0.2 0.36 0.35 0.16 0.09 -0.68 0.25 0.01 -0.17 -0.06 0.31 -0.11 -0.65 -0.07 -0.9 0.71 0.19 1.63 -0.02 -0.07 0.43 0.17 0.08 -0.34 2.42 At5g63310 247376_at NDPK2 nucleotide diphosphate kinase II, Maintains intracellular dNTP levels except ATP, also plays a role in oxidative stress response. 4 response to hydrogen peroxide | nucleoside diphosphate kinase activity regulation of nucleotide metabolism de novo biosynthesis of purine nucleotides I | de novo biosynthesis of pyrimidine ribonucleotides Nucleotide Metabolism | Purine metabolism | Pyrimidine metabolism



1.46 5.04
At3g55800 0.606
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. -2.76 0.14 0.2 0.8 -0.31 -0.4 -0.07 -0.15 -1.85 -1.12 -0.28 -0.01 -2.97 -0.25 -0.64 -1.34 0.1 -0.02 -0.81 -0.1 -0.69 -1.01 -0.01 -0.14 -0.57 -0.15 0.27 -0.02 -0.08 -0.45 -0.45 -0.02 0.19 -0.04 -0.63 0.09 0.17 0.17 -0.05 0.18 0.23 0.1 -0.17 -0.16 -1.9 0.08 -0.28 -0.83 -0.47 -0.48 0.17 0.19 -0.17 0.11 -0.35 0.04 -1.14 0.06 -0.91 -0.05 -0.81 0.21 -0.19 0.19 0.31 0.19 0 0.01 0.08 0.34 -0.13 0.87 0.74 0.17 0.5 0.07 0.4 -0.65 0.31 0.31 0.34 0.17 0.01 -0.01 0.82 0.43 0.19 0.18 0.56 0.06 0.22 0.21 0.39 0.28 -0.02 -0.02 0.66 0.61 0.32 0.52 0.4 0.36 0.21 0.17 0.22 -0.48 -1.44 -1.25 0.46 0.21 -0.04 0.13 0.89 0.78 0.31 0.31 0.27 -0.25 -0.63 -0.53 0.67 0.5 0.23 0.79 0.4 0.56 0.11 0.35 0.22 0.21 0.01 -0.03 -0.09 0.08 -0.18 0.16 1.1 0.26 0.04 -0.08 -0.4 -0.06 -0.77 0.1 -0.08 0.21 0.55 0.68 0.68 -0.11 -0.2 0.82 0.96 0.38 0.65 0.23 0.5 -0.24 0.37 0.21 0.43 0.19 0.1 -0.28 -0.59 -0.28 0.01 0.15 -0.17 0.43 0.91 0.56 0.03 0.57 0.39 0.04 0.2 0.2 0.2 0.2 0.2 0.2 0.38 0.2 -0.11 0.95 0.14 0.2 0.22 0.37 0.19 0.38 0.27 0.16 0.23 -0.46 -0.33 -0.15 -0.32 -0.15 0.07 -0.06 -0.89 -2.71 -5.72 0.8 -0.27 2.84 0.27 0.07 0.45 -0.43 -0.12 -0.89 3.02 At3g55800 251762_at
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. 9 carbohydrate biosynthesis | sucrose biosynthesis | starch biosynthesis C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast
Carbon fixation



1.84 8.74
At1g17220 0.604
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -0.43 0.25 0.24 0.53 -0.36 -0.79 -0.68 -0.45 -1.43 -0.77 -0.57 -0.24 -1.79 -0.56 -1.12 -0.86 -0.34 0.08 -0.34 -0.41 -0.84 -0.7 0.01 -0.39 -0.45 -0.08 0.22 0.13 -0.11 -0.31 -0.31 0.26 0.14 0.06 -0.95 0.23 0.27 0.22 0.18 0.3 0.05 0.11 -0.04 -0.03 -1.17 0.14 -0.92 -0.61 -0.09 0.13 0.05 0.31 0.11 0.09 -0.12 -0.01 -1.01 0.01 -0.92 0.01 -0.78 0.12 -0.1 0.26 0.31 -0.06 -0.2 0.42 -0.09 0.5 0.13 0.07 -0.42 -0.02 0.35 -0.28 0.21 -0.8 0.28 0.21 0.1 0.04 -0.23 -0.39 0.33 0.04 0.05 0.24 0.28 0.56 0.15 -0.08 0.31 0.18 -0.22 0.07 0.64 0.04 0.34 -0.03 0.25 0.32 0.1 0.22 -0.24 -0.39 -0.9 -0.83 0.14 0.07 0.14 0.49 0.87 0.86 0.49 0.42 0.08 -0.13 -0.57 -0.8 0.62 0.28 0.01 0.11 0.01 0.28 -0.04 0.6 0.19 0.3 0.02 0.27 0.04 0.14 0.55 0.27 -0.22 0.18 0.42 0.32 0.15 -0.28 -0.72 0.2 0.28 0.22 0.65 0.45 0.55 -0.08 -0.3 0.4 0.08 0.5 0.39 0.36 0.16 -0.72 0.23 0.34 0.3 0.14 -0.14 -0.79 -0.3 0.18 0.16 0.2 0.41 0.09 -0.47 0.44 0.3 0.48 0.43 0.01 -0.14 0.48 -0.28 0.25 -0.38 0.22 0.95 0.52 0.46 0.84 0.63 0.78 0.47 0.18 0.64 0.56 0.4 0.31 0.32 -0.31 -0.15 0.22 -0.15 0.1 0.3 0.18 -1.65 -0.92 -3.76 0.62 0.19 3.11 0.09 0.17 0.28 0.37 -0.26 -2.25 0.94 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


1.54 6.87
At4g39970 0.604
haloacid dehalogenase-like hydrolase family protein -2.31 0.16 0.23 0.23 -0.16 -0.2 0.04 0.14 -0.59 -0.73 -0.06 0.47 -1.42 -0.1 -0.22 -1.43 0.18 0.15 -1.04 0.13 -0.56 -1.02 0.14 -0.34 -0.9 -0.37 0.05 -0.12 -0.12 -0.52 -0.64 -0.16 0.03 0.26 -0.39 0.25 0.31 0.46 0.26 0.44 0.23 -0.14 -0.4 -0.11 -0.56 0.44 -0.61 -0.44 -0.42 -0.68 0.08 0.3 -0.04 0.22 -0.39 0.13 -0.83 0.22 -0.68 0.23 -0.78 0.22 -0.13 0.5 -0.03 0.02 -0.18 -0.51 -0.04 -0.26 0.23 0.23 0.46 0.23 0.23 0.23 0.23 -0.54 0.05 0.43 0.99 0.51 0.63 0.34 0.23 0.23 0.23 0.23 0.23 0.23 0.25 0.54 0.75 0.53 0.48 -0.31 0.14 0.24 0.23 0.12 0.14 0.23 -0.09 0.09 0.13 -0.6 -1.57 -2.4 0.23 0.26 0.23 0.23 0.23 0.23 -0.02 0.42 0.33 -0.56 -0.62 -1.33 0.23 0.23 0.23 0.23 0.23 0.23 0.63 0.59 0.13 0.55 0.47 -0.17 0.17 0.03 0.23 -0.02 0.31 0.23 0.23 0.07 0.23 0.08 -0.59 -0.18 0.04 0.53 0.17 0.15 -0.1 -0.32 -0.39 0.23 0.23 0.23 0.23 0.23 0.23 -0.33 0.44 0.66 1.12 0.42 0.62 -0.17 0.07 -0.43 0.56 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.56 0.16 -0.11 0.23 0.3 -0.07 0.17 0 -0.92 -0.34 -0.68 -0.59 0.36 0.41 -0.26 -1.48 -1.2 -3.49 2.08 0.96 1.38 0.34 0.31 0.23 -0.56 0.18 -1.64 0.23 At4g39970 252876_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




1.60 5.57
At3g59980 0.603
tRNA-binding region domain-containing protein 0.02 0.15 0.23 0.97 0.08 -0.18 -0.15 -0.15 -0.71 -0.08 -0.25 0.16 -1.13 -0.35 0.02 -0.3 -0.26 0.13 -0.34 -0.33 -0.15 -0.4 0.17 -0.04 -0.15 0.03 0.18 0.11 0.06 -0.07 -0.21 -0.04 0.28 -0.04 -0.22 0.15 0.1 0.24 0.06 -0.06 0.45 0.64 0.62 0.1 -0.46 0.05 0.25 -0.28 -0.37 0.04 -0.02 0.27 -0.05 0.03 -0.35 0.07 -0.85 0.17 -1.02 -0.01 -0.73 0.23 -0.09 0.54 0.28 -0.01 -0.19 -0.27 0.01 0.19 0.14 -0.11 0.03 0.1 0.11 0.18 -0.04 -0.34 0.56 0.14 0.31 0 0.2 0.27 0.13 0 0.12 0.04 0.15 0.3 0.21 0.14 0.11 -0.33 -0.1 0.03 0.08 0.05 0.19 0.07 -0.08 -0.06 0.4 0.42 -0.54 -1.24 -1.3 -1.26 -0.05 -0.08 0.12 -0.2 -0.09 -0.12 0.27 0.23 -0.55 -0.9 -0.39 -0.43 0.25 0.04 -0.2 -0.61 -0.25 -0.22 -0.17 0.66 0.22 -0.06 -0.19 -0.44 -0.2 -0.09 0.33 0.13 -0.21 0.31 -0.02 0.05 0.44 -0.26 -0.71 0.36 -0.1 0.28 0.33 0.02 -0.55 -0.92 -0.33 0.13 0.28 0.27 -0.07 -0.27 -0.76 -0.66 0.06 0.34 0.52 0.42 0.48 -0.23 0.01 -0.25 -0.23 0.17 0.21 0.01 -0.12 0.1 0.07 0.38 0.03 0.37 0.08 0.47 0.5 0.64 0.28 0.37 0.5 0.44 0.26 0.11 0 -0.14 -0.26 -0.09 -0.09 0.59 0.21 0.17 -0.01 -0.64 0.31 0.03 -0.18 -0.07 0.15 0.01 0.73 -0.33 -1.2 2.27 0.21 0.18 0.7 -0.07 0.2 0.45 -0.08 -0.74 1.17 At3g59980 251442_at
tRNA-binding region domain-containing protein 2
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway




1.28 3.58
At1g73300 0.602
serine carboxypeptidase S10 family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At1g73300 257500_s_at (m)
serine carboxypeptidase S10 family protein 2






serine carboxy peptidase like, clade IA 2.04 3.40
At3g10840 0.602
hydrolase, alpha/beta fold family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At3g10840 257533_at
hydrolase, alpha/beta fold family protein 2




Lipid signaling

2.04 3.40
At5g57030 0.601 LUT2 Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase -0.56 -0.06 0.55 0.4 0.17 0.14 0.17 0.07 -1.12 -0.7 -0.31 -0.09 -1.78 -0.34 -0.62 -1.08 -0.46 -0.25 -0.65 -0.42 -0.65 -0.85 -0.16 -0.2 -0.37 -0.32 -0.11 -0.03 -0.06 -0.3 -0.35 -0.08 -0.16 -0.03 -0.63 0.12 0.13 0.12 -0.08 0.18 0.14 0.24 -0.07 -0.36 -1.13 0.19 0.06 -0.97 -0.49 -0.37 0.01 0.42 -0.17 0.14 -0.28 -0.12 -1.09 -0.05 -0.87 0.16 -0.68 0.48 -0.07 0.06 0.11 -0.28 0.06 -0.18 -0.2 0.01 0.11 -0.19 0.06 0.06 -0.07 -0.38 0.36 -0.7 0.18 0.24 0.17 -0.03 -0.12 -0.15 0.01 0.02 -0.14 -0.14 -0.05 0.23 0.28 0.21 0.39 0.02 -0.12 -0.07 -0.14 0.18 -0.04 0.07 -0.13 0.2 0.04 0.47 0.56 -0.13 -0.86 -1.19 0.56 0.78 0.52 0.56 0.32 0.42 0.31 0.62 0.8 0.01 -0.03 -0.56 0.68 0.72 0.43 0.96 0.49 0.67 0.3 0.35 0.33 0.6 0.21 0.1 -0.08 0.08 0.36 0.09 0.26 0.11 0.37 0.05 0.22 -0.09 -0.05 0.21 -0.17 0.56 0.55 0.13 0.06 -0.52 -0.44 0.03 0.52 0.47 0.59 0 0.25 -0.1 0.72 0.03 0.59 0.26 -0.08 -0.62 0.11 -0.06 0.36 0.35 0.44 -0.04 -0.41 -0.35 0.41 0.27 0.12 0.34 0.04 -0.12 0.03 -0.09 -0.19 0.46 0.03 -0.14 0.14 0.28 0.75 0.57 0.02 -0.11 0.28 0.33 -0.08 -0.08 -0.42 -1.06 -0.41 -0.14 -0.41 0 0 -0.15 -0.59 -0.75 -0.4 0.17 0.75 0.96 0.2 0.59 0.42 0.13 0.36 -1.17 0.56 At5g57030 247936_at LUT2 Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase 10 carotene biosynthesis | lycopene epsilon cyclase activity | photosynthesis light harvesting
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.46 2.74
At1g12800 0.600
S1 RNA-binding domain-containing protein -0.68 0.2 0.41 0.7 0.02 -0.77 -0.31 -0.1 -1.37 -0.86 -0.3 -0.08 -1.79 -0.56 -0.64 -1 -0.14 -0.13 -0.64 -0.2 -0.89 -0.76 -0.03 -0.15 -0.54 -0.03 0.2 0.17 0.04 -0.13 -0.38 0.11 0.04 -0.02 -0.39 0.37 0.32 0.33 0.22 0.11 0.5 0.41 0.01 -0.13 -1.06 0.28 0.32 -0.63 -0.5 -0.36 -0.15 0.4 -0.01 0.26 -0.16 0.23 -0.81 0.3 -0.76 0.24 -0.62 0.39 0.09 0.31 0.28 -0.07 -0.15 -0.06 0.24 0.1 0.45 -0.02 0.22 0.25 0.22 0.06 -0.11 -0.6 0.37 0.18 0.32 0.03 0.14 -0.23 0.08 0.23 0.18 0.24 0.03 0.07 0.34 0.12 0.5 0.14 -0.02 -0.22 0.04 0.28 0.19 0.31 -0.07 -0.07 0.1 0.09 -0.13 -0.76 -0.61 -1.03 0.19 0.45 0.61 0.54 0.34 0.3 0.28 0.21 0.23 -0.14 -0.13 -0.66 0.22 0.39 0.28 0.21 -0.01 0.03 -0.16 0.39 0.31 0.13 0.25 -0.11 0.17 -0.13 0.59 0.06 0.19 0.17 0.39 0.34 0.16 -0.06 -0.57 -0.03 0 0.53 0.12 0.13 0.01 0.31 -0.42 0.16 0.34 0.22 0.14 0.14 -0.31 -0.15 0.67 0.03 0.71 0.36 0.09 -0.75 -0.28 -0.35 0.33 0.03 0.73 -0.05 0.01 -0.62 0.28 0.42 0.6 0.31 -0.19 -0.32 -0.4 -1.06 -0.26 -0.16 0.43 0.06 0.42 0.14 0.28 0.24 0.2 0.21 0 0.68 0.23 0.3 0.04 -0.74 0.06 -0.19 -0.15 0.3 -0.02 0.27 -0.83 -0.06 -2.1 0.37 0.15 1.29 0.31 0.28 0.33 -0.06 0.23 -0.81 0.7 At1g12800 261206_at
S1 RNA-binding domain-containing protein 2

Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV




1.34 3.39










































































































































































































































page created by Juergen Ehlting 06/08/06