Co-Expression Analysis of: CYP97A3 (At1g31800) Institut de Biologie Moléculaire des Plantes

































































































































































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Organ and Tissue Data Set view / save heatmap as: OpenOffice table annotation details for co-expressed genes can be found to the right of the heatmap
















































































































































































MS Excel table
















































































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.













































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(sample / average)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 










































































































































































greater than zero                                                         










































































































































































less than zero                                                         










































































































































































Locus r-value Name Description suspension cell, aphidicolin, 0h ( 5) suspension cell, aphidicolin, 2h (5) suspension cell, aphidicolin, 4h (5) suspension cell, aphidicolin, 6h (5) suspension cell, aphidicolin, 8h (5) suspension cell, aphidicolin, 10h (5) suspension cell, aphidicolin, 12h (5) suspension cell, aphidicolin, 14h (5) suspension cell, aphidicolin, 16h (5) suspension cell, aphidicolin, 19h (5) suspension cell, sucrose, 0h (6) suspension cell, sucrose, 2h (6) suspension cell, sucrose, 4h (6) suspension cell, sucrose, 6h (6) suspension cell, sucrose, 8h (6) suspension cell, sucrose, 10h (6) suspension cell, sucrose, 12h (6) suspension cell, 1d (19) suspension cell, 1d (19) suspension cell, 5d (19) suspension cell, 7d (19) suspension cell, senescing (20) protoplast (62) suspension cell, light (153) suspension cell, dark (153) callus, transdifferentiation A1 (78) callus, transdifferentiation A2 (78) callus, transdifferentiation A3 (78) callus, transdifferentiation A4 (78) callus, transdifferentiation A5 (78) callus, transdifferentiation A6 (78) seedling (59) seedling (137) seedling (138) seedling (143) seedling (144) seedling, cont. light, 26h (149) seedling, cont. light, 26h (149) seedling, cont. light, 34h (149) seedling, cont. light, 38h (149) seedling, cont. light, 42h (149) seedling, cont. light, 46h (149) seedling, cont. light, 50h (149) seedling, cont. light, 54h (149) seedling, cont. light, 58h (149) seedling, cont. light, 62h (149) seedling, cont. light, 66h (149) seedling, cont. light, 70h (149) seedling, cont. light, 74h (149) seedling, far red then white light (83) seedling, dark then white light (83) Cotyledon (87) Hypocotyl (87) Hypocotyl (139) leaf, dedifferentiation A01 (50) leaf, dedifferentiation A02 (50) leaf, dedifferentiation A81 (50) leaf, dedifferentiation A82 (50) leaf, dedifferentiation A301 (50) leaf, dedifferentiation A302 (50) leaf, dedifferentiation A481 (50) leaf, dedifferentiation A482 (50) leaf, dedifferentiation B01 (50) leaf, dedifferentiation B02 (50) leaf, whole rosette, 0h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 2h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 13h (56) leaf, whole rosette, 14h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, whole rosette, 24h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, mature, high light (68) leaf, mature, low light (68) leaf stage 7, petiol (88) leaf stage 7, proximal half (88) leaf stage 7, distal half (88) guard cell enriched (11) senescing leaf, Col5 (60) senescing leaf, Col0 (60) senescing leaf (88) cauline leaf (88) roots (87) whole roots, A. halleri (101) whole roots, A. petrea (101) roots (141) mature roots (23) lateral roots (24) lateral roots (29) roots, axillary buds, dormant (30) roots, axillary buds, active (30) Roots, N03 depleted, dex treated (64) Roots, N03 depleted (64) root elongation zone (79) stem (80) stem (88) stem, base (66) stem, tip (66) stem, 1st node (88) stem, base, injured with needle (8) shoot apex (87) shoot apex (87) shoot apex (88) apical region, vegetative, Col (94) apical region, reproductive, 3d, Col (94) apical region, reproductive, 5d, Col (94) apical region, reproductive, 7d, Col (94) apical region, vegetative, Ler (94) apical region, reproductive, 3d, Ler (94) apical region, reproductive, 5d, Ler (94) apical region, reproductive, 7d, Ler (94) flower, stage 9 (89) flower, stage 10 (89) flower, stage 12 (89) flower, stage 15 (89) flower-silique, stage I (84) flower-silique, stage II (84) flower-silique, stage III (84) flower bud, young (9) flower bud, old (9) flower (80) flower (92) flower (100) sepal, stage 12 (89) sepal, stage 15 (89) petal, stage 12 (89) petal, stage 15 (89) stamen, stage 12 (89) stamen, stage 15 (89) carpel, stage 12 (89) carpel, stage 15 (89) pedicel, stage 15 (89) pollen, uninucleate microspores (22) pollen, bicellular (22) pollen, tricellular (22) pollen, mature (22) pollen (74) silique, young (136) silique, old (136) silique, stage 3 (90) silique, stage 4 (90) silique, stage 5 (90) seed, stage 6 (90) seed, stage 7 (90) seed, stage 8 (90) seed, stage 9 (90) seed, stage 10 (90) seed, dry (116) seed, dry (117) seed, fresh (96) seed, dormant (96) seed, imbibed, 1h (117) seed, imbibed, 3h (117) seed, imbibed, 22°C (118) seed, imbibed, far red, 22°C (132) seed, imbibed, 4°C (118) seed, imbibed, far red, 4°C (132) seed, imbibed (116) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At1g31800 1.000 CYP97A3 cytochrome P450 family protein -1.28 -1.71 -1.19 -0.16 -1.04 -0.98 -0.62 -1.21 -0.44 -1.47 0.37 -0.62 -0.63 -0.68 -0.86 -0.76 -0.71 -0.86 -1.05 -1.27 -1.47 0.8 0.96 1.44 1.33 -2.28 -2.09 -1.77 -1.82 -1.36 -2.04 0.53 0.28 0.73 0.96 0.47 0.12 0.04 0.49 1 0.98 0.6 0.23 0.36 0.42 0.92 0.92 0.71 0.06 0.71 0.67 1.35 0.3 -0.6 0.3 -0.46 0.78 0.58 -0.32 -0.15 0.58 0.43 -1.29 -0.55 1.5 1.51 1.45 1.44 1.49 1.23 1.2 1.18 1.2 1.06 1.39 1.29 1.69 1.64 1.99 2.09 1.98 1.68 1.45 1.28 1.67 1.37 0.66 1.28 0.86 0.03 1.12 -2.27 -0.03 -0.74 -1.39 -1.68 -0.17 -1.7 0.31 0.96 -1.31 -1.2 -1.74 1.45 0.22 1.11 1.08 0.41 0.7 1.15 0.59 0.24 -0.17 0.02 0 -0.12 -0.04 0.07 -0.05 0.05 0.26 0.55 0.45 0.48 0.43 0.84 1.53 0.44 0.63 0.94 0.22 0.81 1.25 0.53 0.72 0.72 -0.93 0.29 0.2 0.77 1.48 -1.81 -1.67 -1.42 -1.39 -1.24 0.93 0.87 0.98 0.14 -0.07 -1.03 -1.38 -2.65 -1.93 -2.59 -2.78 -2.65 -1.39 0.01 -2.55 -2.51 -1.91 -1.91 -0.7 -0.59 -0.53 At1g31800 246268_at CYP97A3 cytochrome P450 family protein 1






cytochrome P450 family 3.58 4.87
At2g26500 0.895
cytochrome b6f complex subunit (petM), putative -2.08 -2.49 -1.84 -1.48 -1.4 -1.14 -1.05 -1.51 -1.36 -1.08 0.98 -0.61 -1.42 -1.35 -1.73 -1.89 -1.92 -2.31 -1.82 -1.39 -1.89 0.02 -0.14 1.81 1.99 -3.43 -3.71 -3.7 -3.71 -3.69 -4.71 1.47 1.22 1.74 2.11 0.5 1.03 1.2 1.38 1.39 1.48 1.23 1.51 1.2 1.14 1.53 1.6 1.55 1.13 1.45 1.39 1.98 0.53 2.29 1.69 1.57 0.87 0.88 1.43 1.52 0.37 0.62 -1.73 -0.66 1.97 1.6 1.71 1.8 1.97 2.06 1.91 1.88 1.85 1.91 1.92 2.16 2.14 2.21 2.31 2.49 2.4 2.02 2.02 1.88 2.19 2.22 1.89 1.81 1.7 0.45 1.66 -5.22 0.23 1.17 -2.69 -4.74 -0.09 -4.54 1.26 1.83 -3.53 -3.57 -4.38 2 1.51 1.36 1.28 1.15 0.92 1.26 0.56 0.35 0.47 0.61 0.16 0.38 0.67 0.42 0.28 0.17 0.82 1.32 1.05 0.9 0.82 0.72 1.35 0.98 1.11 1.31 0.8 1.27 1.63 1.09 0.72 0.52 -0.65 0.27 0.64 0.95 1.64 -2.22 -1.86 -3.87 -4.18 -4.74 1.99 1.37 1.37 1.15 1.07 0.34 0.12 -1.36 -2.78 -3.12 -4.8 -4.74 -3.19 -0.7 -5.12 -5.39 -1.44 -1.44 -2.76 -2.33 -0.6 At2g26500 245044_at
cytochrome b6f complex subunit (petM), putative 10



Photosystems | Cytochrome b6/f complex


6.62 7.88
At2g35370 0.889 GDCH glycine cleavage system H protein 1, mitochondrial -2.72 -3.15 -2.34 -2.1 -2.15 -1.8 -1.75 -1.91 -1.66 -1.34 -0.67 -0.39 -0.8 -0.7 -0.65 -0.81 -0.99 -1.2 -2.91 -2.35 -4.18 -4.18 -1.92 2.73 2.27 -4.18 -4.18 -4.18 -4.18 -4.18 -4.18 2.09 1.57 1.99 2.68 1.19 1.57 1.68 1.8 2.21 2.17 2.04 1.83 1.62 1.77 2.27 2.27 2.24 1.78 1.5 1.81 2.87 0.22 2.23 2.46 1.4 1.58 1.33 1.15 1.28 0.72 0.84 -4.18 -4.13 3.05 2.77 2.89 2.93 3.01 2.91 2.76 2.78 2.7 2.68 2.94 2.79 2.85 2.92 3.44 3.44 3.42 3.28 3.39 2.66 3.33 3.23 1.84 2.35 1.94 -0.65 2.09 -4.3 0.63 1.06 -4.18 -4.18 -1.06 -4.18 0.85 1.94 -4.18 -4.32 -4.18 2.34 1.3 1.2 2.06 1.18 0.84 1.97 0.89 0.35 -0.16 0.05 -0.46 -0.46 0.57 0.17 -0.25 -0.2 1.36 2.02 1.8 1.41 1.52 1.53 2.13 1.58 1.76 1.67 1.29 1.24 2.87 1.66 0.8 0.18 -2.36 -0.94 0.56 1.4 2.73 -4.18 -3.09 -4.18 -4.18 -4.18 1.81 0.17 2.18 1.11 0.59 -2.22 -3.04 -4.18 -4.18 -4.18 -4.18 -4.18 -4.18 -4.18 -4.18 -4.18 -0.84 -0.84 -4.18 -4.18 -1.5 At2g35370 266636_at GDCH glycine cleavage system H protein 1, mitochondrial 6 glycine dehydrogenase (decarboxylating) activity | photorespiration | glycine decarboxylation via glycine cleavage system
formylTHF biosynthesis | glycine degradation I | photorespiration




7.17 7.76
At4g21280 0.889
oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ -2.77 -3.19 -2.09 -1.79 -2.08 -1.93 -2.13 -2.02 -2.4 -2.61 -0.99 -2.5 -2.98 -2.71 -2.45 -2.54 -2.59 -2.5 -3.06 -2.83 -3.87 -2.14 -1.2 2.1 2.02 -4.22 -4.11 -4.13 -4.18 -4.26 -4.78 1.92 0.81 1.98 2.66 1.75 1.59 2.17 1.82 2.06 1.97 1.93 2.21 2.12 1.95 1.87 2.06 2.08 1.83 1.82 2.08 2.41 0.69 1.55 2.27 1.71 0.86 0.82 1.38 1.75 0.09 0.33 -3.44 -1.97 2.54 2.12 2.24 2.31 2.52 2.56 2.54 2.52 2.63 2.56 2.49 2.83 2.98 2.92 2.83 2.96 2.95 2.62 2.7 2.27 2.61 2.5 2.1 2 2.15 -1.07 1.78 -4.46 1.18 1.66 -3.2 -4.55 -0.39 -3.25 1.3 2.33 -3.8 -3.28 -3.26 2.2 1.93 1.19 1.97 1.59 0.16 1.93 1.39 0.94 0.76 0.83 0.73 0.41 0.89 0.7 0.54 0.44 1.5 1.81 1.44 0.93 1.34 0.98 2.04 1.36 1.46 1.46 1.38 1.25 1.88 -0.28 0.97 -0.07 -1.58 -0.74 0.92 1.32 2.23 -2.76 -2.52 -2.79 -3.35 -2.75 1.18 -0.33 2.04 1.28 0.84 0.23 -0.46 -2.67 -4.26 -4.3 -4.69 -4.26 -3.37 -2.29 -4.62 -4.8 -1.06 -1.06 -3.52 -3.15 -1.4 At4g21280 254398_at
oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ 10
photosynthesis

Photosystems | Photosystem II | Oxygen-evolving enhancer protein


6.89 7.79
At5g23120 0.885 HCF136 encodes a stability and/or assembly factor of photosystem II -1.18 -1.6 -1.58 -1.15 -1.5 -1.71 -2.68 -1.45 -1.52 -1.22 -0.93 -1.58 -1.12 -0.93 -1.48 -1.09 -1.05 -1.37 -1.43 -1.13 -1.38 -1.57 -0.03 2.38 2.5 -2.21 -2.04 -2.52 -2.27 -1.84 -1.71 2.09 0.66 2.02 1.94 0.71 1.03 1.03 1.17 1.42 1.45 1.29 1.2 1.12 1.32 1.6 1.5 1.29 0.84 1.97 1.91 2.17 0.05 0.69 1.86 1.18 -0.16 -0.22 0.84 1.21 -0.87 -1.09 -2.98 -2.56 2 2 1.96 2.13 2.24 2.24 2.16 2.1 2.17 1.98 2.04 2.27 2.27 2.23 2.27 2.25 2.52 2.59 2.63 1.7 2.2 2.18 1.02 0.8 0.76 -0.3 1.57 -3.17 -0.07 0.23 -2.34 -3.09 -1.39 -2.45 0.18 0.67 -2.06 -2.16 -2.24 0.95 1.11 0.35 0.93 0.98 0.19 1.08 0.09 -0.37 -0.6 -0.33 -0.5 -0.57 0.06 -0.16 -0.31 -0.22 0.44 1.01 0.88 0.64 0.62 0.36 0.85 0.75 0.77 -0.05 0.54 0.17 1.9 0.94 0.12 0.59 -1.71 -0.07 -0.06 0.37 2.04 -1.8 -2.29 -2.65 -2.65 -2.68 1.27 0.41 1.13 0.82 0.59 -1.36 -1.71 -2.27 -2.54 -3.04 -2.09 -2.11 -1.56 -0.54 -2.02 -2.83 -1.18 -1.18 -1.69 -1.85 -1.31 At5g23120 249875_at HCF136 encodes a stability and/or assembly factor of photosystem II 10 protein binding | plastid organization and biogenesis | protein complex assembly


Thylakoid biogenesis and photosystem assembly


4.87 5.81
At1g62750 0.883
elongation factor Tu family protein -1.48 -2.24 -1.89 -1.8 -1.83 -1.76 -1.7 -1.59 -1.56 -1.8 -1.6 -1.77 -2.42 -2.09 -1.81 -1.24 -1.3 -1.4 -1.57 -1.57 -2.41 -2.02 0.25 2.46 2.34 -2.09 -2.41 -2.41 -2.27 -2.56 -2.5 2.25 0.87 2.45 1.82 0.93 1.42 1.17 1.4 1.55 1.89 1.86 1.58 1.22 1.43 1.8 1.97 1.98 1.02 1.88 2.11 2.06 0.02 -0.04 1.9 0.44 0.67 0.69 0.09 0.26 0.13 -0.36 -1.66 -1.84 2.12 1.9 1.99 1.99 2.25 2.41 2.35 2.46 2.39 2.02 2.11 2.15 2.45 2.11 2.21 2.19 2.37 2.76 2.8 1.38 2.06 1.9 0.95 1.58 1.34 1.08 1.77 -3.52 -0.57 -2.17 -2.94 -3.5 -0.72 -2.04 0.28 0.8 -2.76 -2.21 -2.11 0.88 0.25 -0.09 1.12 0.09 0.08 1.6 0.84 -0.26 -0.3 0.01 -0.22 -0.57 0.16 -0.39 -0.65 -0.57 0.35 0.73 0.87 0.39 0.46 0.47 1.04 0.6 0.88 0.54 0.54 0.79 1.65 0.95 -0.07 0.03 -1.95 -1.05 -0.16 0.49 1.96 -2.31 -2.49 -3.39 -3.39 -3.39 1.01 0.47 0.9 0.9 0.54 -1.18 -1.64 -2.77 -2.76 -3.14 -2.41 -2.54 -0.67 0.91 -2.58 -1.91 -0.49 -0.49 0.39 0.06 0.33 At1g62750 262645_at
elongation factor Tu family protein 2


Translation factors



5.13 6.32
At2g30390 0.883
ferrochelatase II, Protoheme ferro-lyase -1.19 -1.65 -0.42 -0.31 -0.6 -0.6 -0.49 -0.67 -0.79 -0.53 -0.51 -0.12 0.06 0.02 -0.28 -0.17 -0.47 -0.46 -1.28 -0.76 -1.12 -1.47 -1.27 1.12 0.48 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 0.3 -0.01 0.91 1.11 -0.37 -0.03 0.22 0.55 0.96 0.69 0.65 0 0.62 0.73 0.78 0.84 0.48 -0.06 0.14 0.8 1.29 -0.12 -1.65 1.22 -0.03 0.82 0.22 -0.02 0.13 0.46 -0.05 -1.61 -1.22 1.99 1.83 1.85 1.54 1.49 0.94 1.17 1.53 1.69 1.66 2 0.92 1.6 1.84 2.35 2.1 1.83 1.92 1.9 0.75 1.54 1.48 0.43 1.33 0.95 0.48 1.34 -1.65 -0.8 -0.69 -1.65 -1.65 -1.65 -1.65 -0.14 0.46 -1.65 -1.65 -1.65 0.31 0.06 -0.05 0.98 -0.23 0.68 0.83 0.38 0.39 0.2 0.02 0.02 0.19 0.14 0.02 0.18 0.13 0.42 0.62 0.66 0.55 0.37 0.54 0.6 0.35 0.66 0.28 0.51 0.87 1.23 0.52 0.35 0.06 -0.89 -0.12 0.61 0.56 1.54 -0.56 -0.19 -1.65 -1.65 -1.65 0.99 0.04 0.96 0.5 0.17 -1.01 -1.4 -1.71 -1.65 -1.65 -1.63 -1.39 -1.65 -0.89 -1.78 -2.13 -0.88 -0.88 -1.73 -1.65 -0.91 At2g30390 267471_at
ferrochelatase II, Protoheme ferro-lyase 10

biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | phytochromobilin biosynthesis
3.48 4.49
At5g36700 0.883
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) -2.19 -2.65 -2.65 -3.5 -2.57 -2.27 -1.98 -2.2 -2.6 -2.44 -0.9 -1.07 -2.2 -1.87 -1.99 -1.82 -1.88 -2.22 -3.5 -2.42 -3.5 -3.5 -1.69 2.12 1.87 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 1.97 1.48 1.68 2.37 1.01 1.64 1.42 1.5 1.66 1.99 1.94 1.93 1.44 1.56 1.87 2.22 2.18 1.49 0.91 1.62 2.79 0.21 1.01 2.47 0.91 0.56 0.38 0.5 1.12 0.17 -0.04 -2.95 -3.21 2.69 2.54 2.56 2.6 2.83 2.86 2.78 2.82 2.84 2.6 2.76 2.42 2.62 2.33 2.46 2.83 2.85 2.94 2.96 2.4 3 2.83 1.58 2.56 2.45 0.88 2.27 -3.57 -0.25 -0.71 -3.5 -3.5 -1.07 -3.5 0.88 1.93 -3.5 -3.38 -3.5 2.17 1.78 1.66 2.04 1.63 1.43 1.57 0.28 -0.1 -0.28 0.27 -0.12 -0.07 0.52 0.03 -0.04 0.05 1.2 1.83 1.49 0.99 1.48 1.24 1.92 1.46 1.66 1.18 1.32 1.2 2.35 1.09 1.17 0.33 -1.02 0.02 0.67 1.18 2.47 -0.71 -0.54 -2.63 -2.63 -3.5 2.12 1.02 2.2 1.53 1.18 -0.97 -1.5 -3.32 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -2.06 -2.06 -3.81 -3.5 -3.73 At5g36700 249658_s_at (m)
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




6.32 6.81
At5g36790 0.883
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) -2.19 -2.65 -2.65 -3.5 -2.57 -2.27 -1.98 -2.2 -2.6 -2.44 -0.9 -1.07 -2.2 -1.87 -1.99 -1.82 -1.88 -2.22 -3.5 -2.42 -3.5 -3.5 -1.69 2.12 1.87 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 1.97 1.48 1.68 2.37 1.01 1.64 1.42 1.5 1.66 1.99 1.94 1.93 1.44 1.56 1.87 2.22 2.18 1.49 0.91 1.62 2.79 0.21 1.01 2.47 0.91 0.56 0.38 0.5 1.12 0.17 -0.04 -2.95 -3.21 2.69 2.54 2.56 2.6 2.83 2.86 2.78 2.82 2.84 2.6 2.76 2.42 2.62 2.33 2.46 2.83 2.85 2.94 2.96 2.4 3 2.83 1.58 2.56 2.45 0.88 2.27 -3.57 -0.25 -0.71 -3.5 -3.5 -1.07 -3.5 0.88 1.93 -3.5 -3.38 -3.5 2.17 1.78 1.66 2.04 1.63 1.43 1.57 0.28 -0.1 -0.28 0.27 -0.12 -0.07 0.52 0.03 -0.04 0.05 1.2 1.83 1.49 0.99 1.48 1.24 1.92 1.46 1.66 1.18 1.32 1.2 2.35 1.09 1.17 0.33 -1.02 0.02 0.67 1.18 2.47 -0.71 -0.54 -2.63 -2.63 -3.5 2.12 1.02 2.2 1.53 1.18 -0.97 -1.5 -3.32 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -3.5 -2.06 -2.06 -3.81 -3.5 -3.73 At5g36790 249658_s_at (m)
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) 4
phosphate metabolism superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




6.32 6.81
At5g66190 0.881
strong similarity to Ferredoxin--NADP reductase (Pisum sativum, Mesembryanthemum crystallinum, Spinacia oleracea) -2.06 -2.27 -1.35 -1.28 -1.68 -1.66 -1.31 -1.73 -1.3 -1.4 -0.05 -0.73 -1.27 -1.43 -1.5 -1.54 -1.88 -2.36 -2.94 -2.02 -2.5 -0.53 -1.14 1.7 1.43 -3.25 -2.96 -2.8 -3.08 -3.15 -3.18 1.43 0.88 1.24 2.06 0.93 1.66 2.13 1.75 1.83 1.96 1.94 1.99 2.16 1.91 1.91 2.13 2.09 1.77 1.22 1.82 2.37 0.05 0.18 2.54 1.41 1.07 0.74 1.37 1.72 1.07 0.78 -2.36 -1.39 2.54 2.19 2.24 2.38 2.45 2.54 2.31 2.31 2.38 2.37 2.46 1.94 2.16 2.11 2.49 2.52 2.42 2.56 2.58 1.8 2.45 2.39 1.41 1.61 1.12 0.54 2 -4.4 0.78 -0.9 -2.71 -3.89 -0.51 -2.82 0.82 1.6 -3.94 -3.71 -2.7 1.98 1.11 0.79 1.36 1.11 1.1 1.22 0.28 -0.11 0.13 0.22 -0.16 -0.14 0.09 -0.13 -0.42 -0.42 0.77 1.35 1.01 0.95 0.95 0.77 1.37 0.87 0.84 1.02 0.64 0.15 1.92 0.87 0.35 0.47 -1.83 0.1 -0.05 0.83 2.41 -3.89 -3.51 -3.89 -3.89 -3.89 1.36 0.57 1.25 1.41 1.45 0.92 0.82 -0.95 -2.08 -2.76 -3.89 -3.89 -3.41 -2.5 -3.89 -4.69 -1.69 -1.69 -4.19 -3.61 -2.23 At5g66190 247131_at
strong similarity to Ferredoxin--NADP reductase (Pisum sativum, Mesembryanthemum crystallinum, Spinacia oleracea) 6


Photosynthesis Photosystems | Ferredoxin


6.35 7.27
At3g63140 0.879
similar to mRNA binding protein precursor (Lycopersicon esculentum) -1.94 -2.49 -2.74 -4.46 -2.04 -2.24 -2.48 -2.34 -1.79 -2.59 -0.85 -0.33 -2.02 -2.27 -2.61 -3.38 -4.46 -3.32 -2.49 -1.04 -1.93 -4.46 -1.7 3.41 3.1 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 2.8 1.21 2.85 3.06 1.61 2.56 2.56 2.54 2.5 2.6 2.8 2.82 2.75 2.59 2.58 2.94 3.03 2.33 1.55 2.41 3.69 0.74 0.05 3.84 2.54 1.99 1.79 2.31 2.81 0.78 0.4 -4.46 -4.46 3.47 3.15 3.28 3.28 3.54 3.49 3.33 3.45 3.49 3.45 3.39 3.66 3.83 3.81 3.93 3.93 4.05 3.9 3.88 3.11 3.82 3.68 2.11 2.4 2.31 -0.13 2.7 -4.46 0.54 0.16 -4.46 -4.46 -0.96 -4.46 0.59 2.08 -4.46 -4.46 -4.46 2.48 1.77 1.61 2.75 1.85 0.56 2.06 0.35 -0.39 -0.5 -0.16 -1.35 -1.37 0.64 -0.65 -1.45 -0.84 1.51 2.37 1.91 1.33 1.82 1.58 2.71 1.56 1.87 1.13 1.5 0.75 3.09 1.36 0.42 0.41 -1.91 -0.69 0.66 1.57 3.51 -4.46 -3.3 -4.46 -4.46 -4.46 1.93 -0.05 2.5 1.63 0.91 -3.55 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -2.7 -2.7 -4.46 -4.46 -4.46 At3g63140 251157_at
similar to mRNA binding protein precursor (Lycopersicon esculentum) 2
biogenesis of chloroplast colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




8.24 8.51
At1g20020 0.878
Strong similarity to Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) from Pisum sativum, Mesembryanthemum crystallinum, and Spinacia -4.59 -4.59 -4.59 -4.59 -4.59 -1.18 -1.24 -4.59 -1.03 -4.59 0.3 0.14 -0.63 -0.69 -1.18 -1.51 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 -0.63 2.81 2.49 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 2.29 1.95 1.96 3.27 1.76 1.86 2.67 3.12 2.89 2.8 2.38 2.49 2.85 3.18 3.13 2.88 2.75 2.38 1.99 1.82 3.31 0.5 0.44 2.85 2.85 2.52 2.34 2.37 2.84 1.64 1.52 -4.59 -4.59 3.51 3.18 3.17 3.21 3.26 2.8 2.61 2.5 2.83 3.48 3.49 2.62 2.98 3.66 3.67 3.43 3.39 2.9 2.88 2.89 3.53 3.44 1.29 3.15 2.6 0.62 2.62 -4.59 1.28 1.02 -4.59 -4.59 -2.11 -4.59 1.09 2.58 -4.59 -4.59 -4.59 2.94 1.73 1.59 2.41 1.99 1.65 2.39 1.35 0.61 1.04 0.74 -0.11 -0.25 1.11 0.08 -0.36 -0.22 1.47 2.22 2 1.8 1.4 1.26 2.12 1.47 1.56 2.04 1.65 0.94 3.07 1.93 0.98 1.21 -1.47 -0.13 0.99 1.89 3.29 -4.59 -4.59 -4.59 -4.59 -4.59 2.33 0.78 1.93 1.66 1.22 -2.17 -2.64 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 -4.59 -1.51 -1.51 -4.59 -4.59 -3.42 At1g20020 261218_at
Strong similarity to Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) from Pisum sativum, Mesembryanthemum crystallinum, and Spinacia 6


Photosynthesis Photosystems | Ferredoxin


7.95 8.26
At2g29630 0.878
thiamine biosynthesis family protein / thiC family protein -2.42 -2.83 -2.09 -1.84 -1.65 -1.47 -1.58 -1.74 -1.85 -1.61 -0.01 -0.34 -0.69 -0.9 -1.26 -1.45 -1.61 -1.81 -1.25 -0.68 -0.47 -1 -0.34 0.83 0.64 -2.82 -2.99 -2.99 -3.08 -2.54 -2.92 0.7 1.35 -0.38 2.23 -0.21 0.49 1.11 2.11 2.17 1.85 1.46 0.62 1.67 2.35 2.15 2.09 1.66 1.23 -0.39 -0.45 2.6 0.79 0.7 0.84 1.67 1.63 1.34 0.68 0.73 1.91 1.12 -2.59 -1.57 3.01 2.58 2.65 2.68 2.75 2.5 2.42 2.09 1.69 2.84 2.99 2.25 1.33 2.61 3.04 2.81 2.95 2.42 2.35 2.24 2.85 2.76 0.83 3.07 2.21 2.36 1.99 -3.38 0.14 -1.97 -2.2 -2.99 0 -2.99 0.74 2.09 -2.99 -2.99 -3.1 1.89 1.01 2.61 1.81 1.37 1.7 1.18 0.66 0.06 -0.55 -0.64 -0.74 -0.97 -0.39 0.08 -0.11 -0.28 0.08 0.65 0.63 0.71 0.2 -0.3 0.7 1.27 0.71 0.96 0.04 -0.43 1.45 0.84 -0.51 -0.38 -1.82 -0.47 -0.19 0.4 1.85 -1.4 -0.85 -2.99 -2.99 -2.99 1.6 1.24 -0.44 1.17 1.21 -0.04 -0.53 -2.78 -3.07 -2.99 -2.99 -3.31 -2.99 -3.02 -3.41 -3.48 -2.31 -2.31 -2.99 -2.99 -3.01 At2g29630 266673_at
thiamine biosynthesis family protein / thiC family protein 2

thiamine biosynthesis Thiamine metabolism



5.76 6.56
At4g18480 0.876 CHLI1 Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. -2.02 -2.9 -1.46 -1.8 -1.6 -1.64 -1.48 -1.53 -1.65 -1.5 -0.48 -0.42 -0.74 -0.53 -0.87 -0.71 -1.03 -1.35 -1.61 -2.22 -3.59 -2.69 -0.8 2.14 1.57 -2.39 -2.31 -2.83 -2.95 -2.83 -3.29 1.67 0.15 1.91 1.99 1.42 1.4 1.48 1.45 1.36 1.55 1.66 1.83 1.7 1.65 1.51 1.52 1.7 1.41 1.32 1.79 1.88 0.24 -0.49 2.02 0.68 0.88 0.71 0.24 1.09 0.06 0.45 -1.7 -1.17 1.96 1.77 1.64 1.68 1.91 2 1.94 1.93 2.19 2.06 1.82 2.04 2.5 2.52 2.27 2.18 2.29 2.69 2.67 1.68 2.04 1.79 1.24 1.05 1.12 -1.14 0.68 -3.04 -0.48 0.35 -2.77 -3.85 -1.73 -2.92 0.4 1.33 -2.81 -2.29 -2.7 1.13 0.1 -0.88 1.62 0.23 -0.44 1.98 1.49 0.66 0.66 0.96 0.82 0.54 1.05 0.89 0.66 0.62 0.87 1.06 0.93 0.4 0.94 1.18 1.99 0.98 1.29 1.26 0.93 1.2 1.33 -0.44 1.05 0.04 -0.9 -0.31 0.37 0.91 2.11 -2.13 -1.76 -4.49 -4.49 -4.49 0.74 0.36 1.61 0.77 0.86 0.47 -0.05 -2.16 -3.34 -4.28 -4.49 -4.49 -2.89 0.09 -4.49 -4.76 -0.34 -0.34 -0.67 -0.86 0.45 At4g18480 254623_at CHLI1 Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. 10 magnesium chelatase activity | chlorophyll biosynthesis | magnesium chelatase complex
chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
5.90 7.46
At4g34190 0.876
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. -1.22 -2.52 -0.65 -1.12 -0.93 -0.79 -1.24 -0.99 -0.7 -0.91 -0.39 -1.18 -1.27 -1.44 -1.44 -1.02 -1.39 -1.32 -1.62 -0.87 -2.06 -1.59 0.22 2.17 1.64 -3.57 -3.59 -3.54 -3.55 -2.77 -3.53 1.54 0.34 1.62 1.96 0.84 1.26 1.44 1.18 1.56 1.48 1.44 1.42 1.42 1.4 1.46 1.54 1.68 1.43 1.64 1.72 1.95 -0.39 0.82 1.7 0.54 0.37 0.34 0.31 0.57 -0.38 -0.42 -2.63 -2.17 1.9 1.7 1.76 1.83 1.85 1.79 1.83 1.87 2.02 1.91 1.84 1.82 2.14 2.08 2.15 2.19 2.11 2.08 2.11 1.38 2.06 1.92 1.2 1.32 1.24 -0.33 0.93 -3.11 0.55 1.81 -3.01 -3.44 -1.36 -2.88 0.22 1.14 -2.25 -2.48 -2.67 1.31 0.05 0.02 1.05 0.11 -0.22 1.2 0.39 0.01 0.05 0.22 0.01 -0.07 0.33 -0.04 -0.07 -0.16 0.57 0.98 0.75 0.47 0.67 0.65 1.25 0.8 0.91 1.17 0.55 0.27 1.61 0.84 0.27 0 -1.39 -0.48 0.1 0.51 1.67 -3.04 -2.96 -2.47 -2.5 -2.12 0.55 -0.09 1.23 0.56 0.42 -0.55 -0.87 -1.99 -2.27 -2.33 -1.26 -1.39 -1.33 -0.5 -1.25 -2.52 -0.98 -0.98 -1.36 -1.28 -0.12 At4g34190 253272_at
Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. 8 response to high light intensity | chlorophyll binding


Photosystems | additional photosystem II components | Early light-inducible proteins


5.04 5.77
At4g09650 0.875
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) -3.12 -3.56 -2.8 -2.71 -2.49 -2.74 -2.85 -2.45 -2.86 -2.65 -1.37 -3.13 -3.2 -2.68 -2.5 -2.52 -2.27 -2.78 -3.25 -3.45 -4.34 -3.18 -1.85 2.73 2.27 -3.09 -3.46 -4.08 -3.5 -3.82 -3.92 2.31 0.7 2.68 2.87 1.89 2.16 2.15 1.91 2 2.04 2.13 2.4 2.29 2.13 2 2.02 2.19 2 1.72 2.48 2.91 0.41 0.52 2.95 1.67 0.86 0.64 0.95 1.51 0.09 0.65 -2.74 -2.04 2.85 2.27 2.47 2.52 2.73 2.68 2.8 2.89 3.15 3.01 2.64 2.37 3.17 2.94 2.78 2.59 2.77 3.19 3.23 2.52 3.1 2.96 1.56 1.8 1.99 -1.02 1.69 -3.46 0.36 1.34 -2.65 -3.47 -1.17 -2.18 0.03 1.35 -2.48 -2.42 -2.04 2.24 1.48 0.07 1.8 1.18 0.1 1.83 0.73 -0.26 -0.06 0.38 -0.16 -0.4 0.62 0.04 -0.32 -0.4 0.71 1.28 1.12 0.61 1.12 1.22 2.18 0.89 1.12 1.19 0.93 1.03 2.02 0.03 0.76 0.46 -1.21 -0.16 -0.18 0.83 2.64 -2.42 -2.25 -2.76 -2.72 -2.58 0.86 -0.04 1.8 1.22 0.89 0.07 -0.89 -2.45 -3.66 -3.46 -3.84 -4.09 -3 -1.11 -4.01 -2.88 -1.64 -1.64 -2.87 -2.81 -0.87 At4g09650 255046_at
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) 4
transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.48 7.58
At4g33010 0.874
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) -3.38 -2.45 -1.86 -1.73 -2.52 -2.02 -2.29 -2.41 -2.11 -2.66 -1.35 -0.06 -0.11 -0.48 -1.12 -1.01 -1.72 -2.93 -2.63 -2.38 -1.83 -3.26 0.65 2.04 2.06 -2.85 -3.38 -2.93 -2.93 -2.93 -2.93 1.53 1.21 2.15 1.86 0.2 1.47 1.11 1.07 1.62 1.89 1.9 1.59 1.18 1.47 1.91 2.06 2.08 1.03 1.27 1.64 2.21 0 -1.01 2.69 0.56 1.81 1.4 0.13 0.69 1.46 0.34 -2.93 -2.52 2.35 1.99 2.1 2.02 2.16 2.16 2.17 2.44 2.47 2.12 2.31 1.4 2.22 1.65 2.21 2.18 2.06 2.47 2.48 1.3 2.14 2.2 1.24 1.15 0.71 0.92 2.38 -1.33 0.25 -1.9 -2.4 -1.01 -1.78 -1.4 -0.65 0.25 -1.64 -1.64 -1.49 1.51 1.04 0.87 0.97 0.83 1.35 0.74 -0.09 -0.36 0.12 0.45 -0.06 0.26 1.03 0.68 0.42 0.3 0.55 1.31 1.12 0.86 1.32 1.27 1.71 0.48 0.82 0.16 0.61 0.44 2.21 1.82 -0.95 -0.26 -0.76 -0.81 -0.43 0.39 2 -1.86 -1.74 -1.36 -1.32 -1.08 1.72 0.9 0.65 1.79 1.63 -1.04 -1.5 -3.12 -3.51 -3.42 -3.3 -3.44 -3.07 -1.72 -3.34 -4.48 -1.45 -1.45 -2.08 -2.6 -1.61 At4g33010 253387_at
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) 6

glycine degradation I Glycine, serine and threonine metabolism



5.43 7.18
At3g51820 0.872
chlorophyll synthetase, putative -1.89 -2.21 -1 -0.63 -0.76 -0.68 -0.8 -0.88 -0.75 -0.95 0.54 0 -0.09 -0.01 -0.14 -0.25 -0.41 -1 -1.08 -0.85 -1.17 -1.49 -0.13 1.92 1.5 -2.92 -3.34 -3.12 -3.28 -3.26 -3.33 1.55 0.22 1.58 1.02 0.45 1.01 0.92 1.08 1.22 1.29 1.41 1.21 0.87 0.99 1.21 1.29 1.47 0.89 0.86 0.77 1.47 0.04 -0.28 1.63 0.38 0.15 0.01 -0.02 0.48 -0.11 -0.55 -2.29 -1.47 1.45 1.3 1.23 1.28 1.56 1.66 1.77 1.73 1.7 1.36 1.31 2.18 2.34 2.29 2.33 2.1 2.45 2.46 2.48 1.19 1.61 1.42 1.05 0.94 0.86 0.01 1.01 -3.84 0.35 -1.39 -2.8 -3.22 -0.5 -1.85 0.62 1.26 -2.14 -2.17 -1.81 -0.26 -0.3 -0.26 1.09 -0.12 0.43 1.42 0.81 0.28 0.8 0.91 0.46 0.46 1.03 0.89 0.41 0.56 0.46 0.68 0.45 0.14 0.38 0.46 0.92 0.69 0.5 -0.18 0.44 0.69 1.09 0.02 0.37 -0.65 -1.27 -0.67 0.17 0.56 1.64 -1.51 -1.27 -0.4 -0.18 0.56 0.56 0.01 1.08 0.5 0.38 0.2 -0.15 -2.23 -2.43 -3.38 -2.98 -3.04 -1.66 -1.2 -3.39 -3.67 -0.51 -0.51 -1.72 -1.8 -0.64 At3g51820 246308_at
chlorophyll synthetase, putative 10
biosynthesis of vitamins, cofactors, and prosthetic groups | photosynthesis | biogenesis of chloroplast chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll a biosynthesis
5.07 6.32
At4g04640 0.870 ATPC1 One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. -3.35 -4.07 -2.71 -4.07 -2.24 -2.42 -2.37 -2.24 -4.07 -2.69 -0.85 -1.42 -1.94 -1.55 -2.31 -2.35 -4.07 -3.02 -4.07 -2.57 -4.07 -1.86 -1.23 2 1.9 -3.59 -4.07 -4.07 -4.07 -4.07 -4.07 1.65 1.34 1.89 2.15 1.53 1.68 2.02 1.85 1.94 1.91 1.87 2.18 1.99 1.9 1.94 1.94 2.2 1.82 1.51 1.83 2.47 0.78 0.9 2.52 1.94 1.54 1.58 1.77 2.18 1.24 1.35 -1.98 -1.05 2.38 1.9 1.94 2.08 2.27 2.27 2.19 2.14 2.29 2.36 2.25 2.31 2.54 2.54 2.52 2.58 2.47 2.43 2.48 2.29 2.71 2.66 1.92 2.16 2.08 1 2.27 -3.85 1.27 1.53 -2.65 -4.07 -0.55 -2.94 0.85 1.68 -2.84 -2.43 -2.68 1.97 1.73 1.21 1.44 1.46 1.08 1.54 0.87 0.28 0.52 0.77 0.3 0.21 0.85 0.36 0.07 0.02 0.98 1.5 1.39 1.22 0.93 0.97 1.49 0.77 1.11 1.24 1 0.96 2.06 1.33 1.13 1.11 -0.51 1.03 0.62 1.31 2.15 -4.07 -3.32 -4.07 -4.07 -4.07 1.71 0.93 1.59 1.72 1.59 0.6 -0.18 -2.35 -4.07 -4.07 -4.07 -4.07 -3.31 -1.46 -4.07 -4.07 -1.12 -1.12 -4.07 -4.07 -0.13 At4g04640 255290_at ATPC1 One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. 10 chloroplast ATP synthase complex | ATP synthesis coupled proton transport | enzyme regulator activity transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.54 6.78
At1g42970 0.869 GAPB Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase. -2.68 -2.82 -2.59 -1.96 -2.14 -2.39 -2.11 -1.95 -2.04 -2.1 0.17 0.41 -0.63 -0.68 -1.14 -1.66 -1.94 -3.54 -2.37 -2.67 -3.05 -3.77 -0.98 3.02 2.96 -5.31 -5.31 -5.31 -5.31 -5.31 -5.31 2.59 1.44 2.91 2.86 1.99 2.15 2.25 1.95 2.46 2.7 2.5 2.52 2.2 2.18 2.64 2.79 2.85 2.17 2.29 2.52 3.33 0.61 0.74 3.25 1.44 1.69 1.3 1.37 1.96 1.12 0.92 -5.31 -4.05 3.06 2.81 2.83 3.09 3.39 3.36 3.24 3.21 3.19 3.02 2.99 3.31 3.35 3.14 3.41 3.54 3.64 3.42 3.45 2.94 3.51 3.45 2.14 2.1 1.75 0.7 2.63 -5.3 -0.11 -2.04 -5.31 -5.31 -0.77 -5.31 0.81 1.57 -5.09 -4.2 -5.31 1.91 1.62 0.89 2.02 1.63 1.19 2.08 0.81 -0.18 -0.19 -0.05 -0.77 -1.03 0.56 -0.44 -1.1 -0.96 1.42 2.27 2.09 1.5 1.78 1.59 2.39 1.37 1.5 0.73 1.34 0.48 3.1 1.79 0.95 0.3 -1.19 -0.34 0.5 1.56 3.1 -5.31 -4.01 -5.31 -5.31 -5.31 1.51 0.77 1.9 2.02 1.94 0.66 0.28 -2.33 -3.92 -5.31 -3.92 -3.95 -4.67 -4.3 -4.17 -4.01 -0.78 -0.78 -5.31 -5.31 -1.49 At1g42970 259625_at GAPB Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase. 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis Intermediary Carbon Metabolism


8.66 8.94
At1g32470 0.868
similar to Glycine cleavage system H protein 1, mitochondrial precursor from Arabidopsis thaliana -3.62 -3.62 -3.62 -3.62 -1.6 -3.62 -2.08 -1.43 -3.62 -1.58 0.28 -0.32 -0.73 -0.37 -0.92 -0.95 -0.64 -1.78 -3.62 -3.62 -3.62 -3.62 -1.68 2.8 2.64 -3.62 -3.62 -3.62 -3.62 -3.62 -3.62 2.25 1.4 2.5 2.57 1.48 1.49 1.77 1.63 2.15 2.13 1.85 1.82 1.75 1.81 2.23 2.22 1.98 1.75 1.88 2.11 2.54 0.7 1.58 2.27 1.3 1.29 0.83 0.62 1.3 -0.69 0.11 -3.62 -1.63 2.66 2.52 2.56 2.74 2.84 2.56 2.58 2.5 2.5 2.31 2.7 2.47 2.64 2.47 2.92 3.13 3.07 3.12 3.04 2.52 3.02 2.77 1.43 1.59 1.46 -1.94 1.47 -3.62 0.15 0.79 -3.62 -3.62 -0.33 -3.62 0.66 1.35 -3.62 -3.62 -3.62 2.02 1.32 0.56 1.82 1.57 0.26 2.12 1.28 0.55 0.63 1 0.6 0.32 1.24 0.79 0.51 0.3 1.29 1.74 1.52 1.1 1.31 1.18 2.27 1.14 1.44 1.17 1.2 1.43 2.27 0.02 0.61 -0.14 -1.01 -0.94 0.97 1.67 2.78 -3.62 -3.62 -3.62 -3.62 -3.62 1.3 -1.49 1.99 0.78 0.64 -0.92 -1.75 -3.62 -3.62 -3.62 -3.62 -3.62 -3.62 -3.62 -3.62 -3.62 -0.57 -0.57 -3.62 -3.62 -1.54 At1g32470 260704_at
similar to Glycine cleavage system H protein 1, mitochondrial precursor from Arabidopsis thaliana 4

glycine degradation I




6.39 6.75
At3g26570 0.868 PHT2;1 low affinity phosphate transporter -2.79 -2.6 -1.72 -1.31 -1.39 -1.37 -1.18 -1.55 -1.86 -2.21 0.38 0.56 0.17 0.11 -0.12 -0.21 -0.39 -2.93 -2.79 -2.79 -2.79 -1.36 0.03 1.97 1.42 -2.79 -2.79 -2.79 -2.79 -2.79 -2.79 1.75 0.16 2.1 1.15 0.98 1.57 1.39 0.8 1.36 1.63 1.82 1.58 1.26 0.8 1.19 1.7 1.79 1.03 1.1 1.98 1.48 0.91 -0.53 2.39 0.31 0.49 0.64 0.28 0.52 0.33 0.21 -0.54 -1.12 0.96 0.89 0.75 0.77 1.58 2.06 2.16 2.36 2.18 1.39 1.02 1.83 2.08 1.06 1.04 1.06 1.79 2.35 2.35 0.96 1.13 1.08 1.13 0.48 0.6 0.41 1.12 -2.52 0.05 0.04 -1.99 -2.04 -0.53 -1.41 -0.2 -0.09 -1.97 -0.99 -1.22 1.02 0.55 0.92 0.94 1.14 1.12 1.08 0.96 0.41 0.42 0.45 0.33 0.36 1.08 0.79 0.31 0.38 0.53 0.92 0.85 0.4 0.94 1.31 1.49 0.62 0.83 0.97 0.56 1.3 1.22 0.76 0.4 0.34 -0.54 0.4 0.28 0.43 1.32 -2.79 -2.74 -2.79 -2.79 -2.79 1.05 1.18 0.98 1.01 0.78 0.55 -0.25 -1.9 -2.5 -2.81 -2.79 -2.79 -2.33 -1.21 -2.79 -3.24 -1.7 -1.7 -2.79 -2.79 -0.44 At3g26570 257311_at PHT2;1 low affinity phosphate transporter 9 low affinity phosphate transporter activity | phosphate transport

Membrane Transport | Other ion-coupled transporters



4.83 5.63
At3g55800 0.864
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. -2.83 -3.91 -3.91 -1.82 -2.4 -2.54 -2.4 -3.91 -2.02 -2.25 -0.97 -1.34 -1.96 -2.04 -2.18 -2.17 -3.91 -3.19 -2.56 -2.41 -3.08 -3.91 -1.84 2.31 2.29 -3.91 -3.91 -3.91 -3.91 -3.91 -3.91 2.27 1.48 2.42 2.5 1.32 1.83 1.7 1.53 1.98 2.23 2.16 1.99 1.65 1.64 2.13 2.29 2.37 1.53 1.69 2.16 2.62 0.03 0.82 2.76 0.93 1.06 0.74 0.57 1.06 0.28 -0.04 -3.51 -2.84 2.71 2.41 2.47 2.62 2.79 2.88 2.8 2.89 2.91 2.64 2.62 2.43 2.71 2.29 2.58 2.73 2.84 3.04 3.1 2.25 2.89 2.72 1.66 2.33 2.13 0.28 2.06 -3.91 1 -0.31 -3.91 -3.91 -1.28 -3.91 0.8 1.78 -3.91 -3.77 -3.91 2.73 1.12 1.03 1.88 1.08 1.18 1.74 0.6 0.1 -0.41 0.16 -0.37 -0.28 0.48 -0.21 -0.48 -0.25 1.18 1.85 1.69 1.3 1.32 1.56 2.04 1.11 1.38 1.57 1.13 1.01 2.39 1.26 0.57 0.61 -1.43 0.22 0.54 1.46 2.73 -3.12 -2.87 -3.91 -3.91 -3.91 1.83 0.48 2.12 1.68 1.44 0.74 0.33 -0.82 -1.17 -1.87 -3.91 -3.91 -2.21 -1.61 -4.55 -4.16 -0.32 -0.32 -3.91 -3.91 -1.32 At3g55800 251762_at
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. 9 carbohydrate biosynthesis | sucrose biosynthesis | starch biosynthesis C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast
Carbon fixation



6.69 7.67
At1g20340 0.862 DRT112 Similar to plastocyanin from Arabidopsis thaliana / Recombination and DNA-damage resistance protein (DRT112) -2.47 -2.84 -2.06 -1.86 -1.47 -1.69 -1.68 -1.63 -1.75 -1.46 0.06 -1.6 -2.59 -1.75 -2 -1.86 -2.29 -2 -4.11 -3.05 -6.01 -0.53 -0.3 1.82 1.76 -3.73 -3.7 -3.48 -3.92 -3.64 -4.75 1.67 1.21 2.04 2.47 1.66 1.58 1.89 1.7 1.85 1.88 1.64 2.1 1.83 1.6 1.8 1.94 2.06 1.74 1.46 1.57 2.38 0.57 1.98 2.25 1.8 1.04 1.38 1.71 2.1 0.51 1.19 -2.76 -0.99 2.16 1.76 1.75 1.98 2.2 2.27 2.16 2.09 2.17 2.13 1.98 2.45 2.52 2.46 2.52 2.65 2.57 2.1 2.29 2.35 2.63 2.58 2.21 2 1.96 -0.37 1.99 -4.61 0.77 1.57 -2.92 -6.01 -0.73 -3.13 1.34 2.38 -2.89 -2.57 -3.1 2.54 1.82 1.3 1.61 1.52 0.72 1.81 1.08 0.55 0.73 1.09 0.41 0.54 1.19 0.7 0.61 0.6 1.37 1.59 1.41 1.09 1.27 1.09 1.75 1.03 1.31 1.47 1.17 1.43 1.93 0.48 1.35 0.7 -0.68 0.23 0.91 1.43 2.04 -2.5 -2.2 -3.22 -3.96 -4.3 1.51 0.78 1.71 1.41 1.36 0.86 0.33 -1.36 -3.19 -3.45 -5.71 -6.01 -3.68 -3.04 -6.01 -6.01 -1.22 -1.22 -6.01 -6.01 -2.11 At1g20340 255886_at DRT112 Similar to plastocyanin from Arabidopsis thaliana / Recombination and DNA-damage resistance protein (DRT112) 10 response to UV | response to chemical substance

Photosynthesis Photosystems | additional photosystem II components | Plastocyanin


7.17 8.66
At3g55330 0.862
photosystem II reaction center PsbP family protein -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -0.45 -1.93 -3.31 -3.31 -3.31 -2.57 -3.31 -2.68 -3.31 -3.31 -3.31 -3.31 -2.43 2.31 2.29 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 2.44 1 2.25 2.5 1.03 1.6 1.14 1.94 1.64 2.04 1.74 1.67 1.58 1.84 2.17 2 1.76 1.09 1.87 2.61 2.52 -0.02 0.87 2.45 0.84 0.35 0.21 0.33 0.91 -0.84 -1.14 -3.31 -3.31 2.73 2.73 2.74 2.92 3.11 3.02 2.73 2.69 2.64 2.38 2.57 2.72 2.54 2.56 2.86 3.01 3.27 3.19 3.19 2.15 2.81 2.59 1.22 1.63 1.18 -0.75 1.99 -3.3 -0.28 0.87 -2.85 -2.76 -1.43 -3.31 0.85 1.62 -3.31 -3.31 -3.31 1.81 1.01 0.48 2 1.24 -0.27 1.97 0.93 0.74 0.42 0.65 0.39 0.53 0.68 0.33 0.35 0.53 1.45 1.8 1.37 0.74 1.45 1.12 1.98 1.55 1.57 0.95 1.54 1.32 2.06 -0.38 0.45 -0.48 -1.68 -0.54 0.85 1.19 2.74 -2.12 -1.84 -1.54 -1.39 -0.92 1.79 1.08 2.25 1.04 0.91 -0.18 -0.74 -2.63 -3.12 -3.06 -3.31 -3.31 -2.72 -1.2 -3.31 -3.31 -1.09 -1.09 -0.89 -0.75 -0.44 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


6.09 6.57
At4g38970 0.862
strong similarity to plastidic fructose-bisphosphate aldolase from Nicotiana paniculata and Oryza sativa -5.73 -4.51 -4.16 -3.88 -3.91 -4.11 -3.67 -3.39 -3.69 -3.54 -0.21 -0.53 -1.45 -2.24 -2.36 -2.59 -3.12 -3.91 -3.96 -3.66 -5.73 -3.79 -1.43 2.65 2.71 -5.73 -5.34 -5.73 -5.73 -5.73 -5.73 2.21 1.47 2.6 2.81 1.88 1.82 1.94 1.81 1.86 2.12 2.04 2.23 1.85 1.86 2.11 2.2 2.46 1.9 2.04 2.27 2.88 1.23 1.87 2.69 1.49 1.73 1.38 1.58 1.89 1.13 1.13 -3.43 -2.71 2.68 2.19 2.35 2.52 2.76 3 2.75 2.99 3.01 2.75 2.5 3.01 3.21 2.95 2.93 3.14 3.04 2.95 3.12 2.68 3.09 3.08 2.46 1.85 1.88 1.36 2.64 -4.84 1.36 1.66 -3.11 -4.51 -0.28 -3.35 0.9 1.69 -4.7 -4.23 -3.38 2.63 1.88 0.94 1.62 1.44 1.56 2.27 1.46 0.81 0.46 0.71 0.55 0.24 1.06 0.56 0.09 0.06 1.48 2.04 1.84 1.43 1.84 2 2.31 1.43 1.61 1.47 1.53 1.27 2.66 1.88 0.96 -0.42 -1.03 -1.23 1.08 1.67 2.68 -3.69 -2.96 -2.59 -2.67 -2.42 1.96 1.03 2.21 2.27 2.13 1.24 0.79 -2.02 -3.77 -4.34 -5.69 -5.69 -2.54 -1.85 -5.73 -5.95 0.02 0.02 -3.28 -3.74 0.22 At4g38970 252929_at
strong similarity to plastidic fructose-bisphosphate aldolase from Nicotiana paniculata and Oryza sativa 6 pentose-phosphate shunt C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | biogenesis of chloroplast Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


8.72 9.16
At5g13510 0.861
ribosomal protein L10 family protein -1.94 -2.66 -1.06 -0.95 -1.08 -1.06 -1.1 -0.8 -0.9 -0.95 -0.63 -0.84 -0.85 -0.52 -0.54 -0.57 -0.54 -0.96 -1.11 -1.67 -2.02 -2.25 -1.1 1.59 1.13 -2.09 -1.96 -2.45 -2.56 -2.52 -2.29 1.14 -0.32 1.11 1.69 0.99 0.95 1.08 1.13 1.21 1.09 1.2 1.28 1.17 1.22 1.19 1.37 1.49 0.82 1.45 1.56 1.6 -0.32 0.14 1.82 0.71 0.71 0.63 0.33 0.74 -0.31 0.09 -1.18 -1.42 1.53 1.22 1.34 1.36 1.5 1.42 1.44 1.46 1.58 1.49 1.42 1.64 1.89 1.96 1.98 1.94 1.86 2.2 2.15 1.32 1.83 1.54 0.98 1.4 1.26 -1.3 0.32 -1.98 -0.7 -1.35 -2.43 -1.97 -0.98 -1.98 0.01 1.33 -2.48 -2.38 -1.8 0.91 -0.57 -0.48 1.27 -0.45 -0.52 1.66 1.06 0.22 0.11 0.38 0.21 -0.21 0.45 0.18 0.07 -0.01 0.34 0.52 0.44 -0.04 0.51 0.71 1.55 0.49 0.63 0.55 0.22 0.85 0.89 -0.41 0.16 -0.67 -1.59 -0.71 -0.08 0.56 1.51 -1.08 -1.17 -2.04 -2.04 -2.04 0.71 -0.13 1.3 0.64 0.56 0.21 -0.41 -1.58 -2.04 -2.04 -2.36 -2.21 -1.14 0 -2.09 -1.5 -0.51 -0.51 -0.66 -0.42 0.71 At5g13510 245852_at (m)
ribosomal protein L10 family protein 2
protein synthesis | ribosome biogenesis
Ribosome



4.07 4.86
At1g12900 0.859
Similar to Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor -5.28 -5.28 -2.84 -2.12 -2.93 -2.76 -2.54 -2.61 -2.69 -2.67 -0.51 -1.14 -1.74 -1.28 -1.74 -1.86 -2.19 -3.02 -5.28 -5.28 -5.28 -2.25 -1.04 2.39 2.41 -5.28 -5.28 -5.28 -5.28 -5.28 -5.28 2.31 1.36 2.38 2.79 2.1 2.06 2.37 2.11 2.17 2.41 2.35 2.52 2.36 2.1 2.25 2.4 2.68 2.09 1.99 2.29 2.82 1.11 1.1 2.71 1.74 0.9 0.98 1.37 1.89 0.06 0.56 -3.6 -2.08 2.71 2.38 2.38 2.5 2.74 2.9 2.73 2.77 2.87 2.79 2.56 3 3.2 3.06 2.93 3.11 3.08 2.87 2.96 2.64 2.96 2.87 2.61 2.46 2.52 -0.94 2.2 -5.28 1 1.71 -3.54 -5.28 -0.15 -5.28 1.57 2.59 -5.3 -4.26 -5.28 2.92 1.78 1.45 2.35 1.69 0.88 2.17 1.5 1.01 1.1 1.2 1.12 0.96 1.35 0.98 1.05 0.87 1.64 2.04 1.79 1.29 1.85 1.63 2.27 1.66 1.96 1.98 1.76 1.62 2.24 0.15 1.47 1.09 -0.34 0.66 1.12 1.59 2.56 -3.24 -2.35 -5.28 -5.28 -5.28 2.02 0.91 2.39 1.89 1.74 1.21 0.82 -1.43 -3.7 -5.28 -3.32 -3.4 -5.28 -4.65 -3.79 -5.28 -1.95 -1.95 -5.28 -5.28 -2.13 At1g12900 261197_at
Similar to Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis Intermediary Carbon Metabolism


8.19 8.50
At1g67740 0.858 PSBY photosystem II core complex proteins psbY, chloroplast (PSBY) / L-arginine metabolising enzyme -2.54 -2.54 -1.92 -1.6 -1.77 -1.54 -1.38 -1.27 -1.36 -1.8 -0.07 -0.76 -1.3 -1.13 -1.44 -1.29 -1.25 -2 -2.67 -2.17 -3.64 -1.21 -0.64 2 2.02 -2.9 -3.15 -2.83 -2.9 -2.89 -3.75 1.62 0.43 1.97 2.47 1.62 1.63 2.04 1.61 1.33 1.49 1.77 2.23 2 1.64 1.35 1.67 2.1 1.76 1.55 1.91 2.48 0.14 1.28 2.54 2.06 1.21 1.17 1.54 2.23 0.56 1.07 -1.57 -0.61 2.14 1.68 1.75 1.66 1.85 2.15 2.17 2.23 2.41 2.31 2 2.02 2.54 2.36 2.17 1.77 2.06 2.38 2.42 2.16 2.52 2.41 2.19 1.83 1.97 0.21 1.99 -4.71 1.3 1.34 -3.75 -4.86 -0.25 -3.29 0.92 1.83 -2.87 -2.85 -3.21 1.89 1.65 0.88 1.4 1.18 0.84 1.64 0.71 0.11 0.11 0.49 -0.08 0.08 0.81 0.38 0.06 0.07 0.77 1 0.93 0.56 1.18 1.17 1.75 1.04 1.17 0.86 0.97 0.71 1.82 0.45 0.65 0.28 -1.17 -0.23 0.23 0.95 2.18 -4.86 -3.3 -4.86 -4.86 -4.86 1.36 0.63 1.85 1.45 1.28 1.12 0.66 -0.86 -2.1 -2.8 -4.86 -4.86 -3.73 -3.32 -4.86 -4.86 -1.79 -1.79 -4.62 -4.42 -1.81 At1g67740 245195_at PSBY photosystem II core complex proteins psbY, chloroplast (PSBY) / L-arginine metabolising enzyme 6 photosynthesis

Photosynthesis Photosystems | Photosystem II


7.19 7.40
At5g04140 0.856 GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 2.98 3.2 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 3.16 2.14 2.95 3.21 1.87 2.47 2.1 2.31 2.31 2.98 2.96 2.67 2.25 1.97 2.8 3.11 3.1 1.84 2.15 2.69 3.38 0.74 0.06 3.59 2 1.9 2.16 1.49 2.34 2.42 1.79 -0.88 -1.98 3.14 3.23 3.14 3.2 3.46 3.54 3.55 3.66 3.55 3.08 3.41 3.27 3.52 2.95 2.99 3.49 3.69 3.87 3.84 2.89 3.63 3.56 2.24 1.5 1.29 1.3 3.3 -3.71 0.56 -2.17 -3.71 -3.71 -3.71 -3.71 0.42 0.94 -3.71 -3.71 -3.71 2.91 2.22 1.68 1.65 2.06 1.3 1.85 0.64 -0.03 -0.14 0.15 -0.43 -0.26 0.91 0.37 -0.11 0.01 0.99 1.98 1.68 1.6 1.54 1.7 2.02 1.48 1.7 1.57 1.2 1.47 3.22 2.69 -0.19 0.19 -3.27 -1.8 -0.07 1.01 2.82 -3.71 -3.71 -3.71 -3.71 -3.71 2.71 2.21 1.56 2.02 1.75 -2.12 -2.5 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -2.04 -2.04 -3.71 -3.71 -3.71 At5g04140 245701_at GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. 4 photorespiration amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur utilization
Nitrogen metabolism



7.25 7.58
At1g09340 0.855
expressed protein -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 3.34 3.21 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 2.77 1.74 3.21 2.74 1.77 2.56 2.21 1.98 2.59 2.9 2.75 2.52 2.15 2.25 2.72 3 2.93 2.22 2.66 2.87 3.39 0.52 0.48 3.3 1.13 1.08 0.85 0.97 1.66 0.4 0.02 -3.82 -3.82 3.25 3.01 3 3.16 3.38 3.41 3.43 3.44 3.46 3.21 3.07 3.08 3.46 3.16 3.35 3.5 3.63 3.71 3.77 3.05 3.53 3.29 2.22 2.17 1.72 0.05 2.73 -3.82 1.04 2.06 -3.82 -3.82 -3.82 -3.82 0.57 1.66 -3.82 -3.82 -3.82 2.9 1.73 0.98 2.34 1.79 1.35 2.52 0.93 0.16 -0.22 0.14 -0.62 -0.71 0.89 -0.4 -0.71 -0.38 1.61 2.19 2.2 1.45 1.85 1.35 2.61 1.48 1.81 1.59 1.71 1.29 2.97 1.4 0.88 -0.32 -1.61 -0.86 0.74 1.73 3.45 -3.82 -2.6 -3.82 -3.82 -3.82 2.25 1.13 2.61 2.15 1.68 -1.29 -1.7 -3.7 -3.82 -3.82 -3.53 -3.82 -3.82 -2.56 -3.82 -3.92 -0.86 -0.86 -2.17 -2.41 -1.39 At1g09340 263676_at
expressed protein 1

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




7.26 7.69
At1g03630 0.854 POR protochlorophyllide reductase C, chloroplast / PCR C / NADPH-protochlorophyllide oxidoreductase C (PORC) -3.73 -3.73 -1.43 -3.73 -1.2 -1.13 -3.73 -3.73 -3.73 -1.09 -0.61 -0.8 -3.73 -1.09 -1.32 -3.73 -3.73 -1.3 -3.73 -1.01 -3.73 -3.73 -3.73 2.4 1.56 -3.73 -3.73 -3.73 -3.73 -3.73 -3.73 1.37 1.41 2.34 2.73 0.61 2.15 2.43 2.48 2.22 2.4 2.48 2.63 2.43 2.58 2.34 2.6 2.79 2.57 0.49 0.97 2.58 0.26 0.28 2.78 1.13 1.6 1.59 0.8 0.95 0.92 0.81 -3.73 -2.61 2.75 2.52 2.36 2.04 2.14 2.16 1.88 2.29 2.95 2.93 2.69 2.2 3.38 3.47 3.3 2.69 2.85 2.82 2.94 2.04 2.79 2.6 1.5 2.43 2.23 0.6 1.89 -3.73 1.62 0.13 -3.73 -3.73 -1.39 -3.73 0.88 2.16 -3.73 -3.73 -3.73 2.43 0.94 0.68 2.31 0.83 1.4 2.27 1.29 0.56 0.35 0.54 0.08 0.01 0.81 0.11 -0.09 0.13 1.36 1.71 1.25 0.81 1.26 1.33 2.21 1.52 1.56 1.99 1.7 1.79 1.83 -0.89 1.23 -0.69 -1.27 -0.98 0.83 1.55 2.77 -3.73 -2.92 -3.73 -3.73 -3.73 1.34 0.08 2.52 1.39 0.96 -0.27 -1.52 -3.73 -3.73 -3.73 -3.73 -3.73 -3.73 -0.92 -3.73 -3.73 -0.68 -0.68 -3.73 -3.73 -0.04 At1g03630 264839_at POR protochlorophyllide reductase C, chloroplast / PCR C / NADPH-protochlorophyllide oxidoreductase C (PORC) 10 protochlorophyllide reductase activity | chlorophyll biosynthesis
chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
6.52 7.20
At1g17220 0.854
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -2.25 -2.93 -1.78 -1.1 -1.67 -1.98 -1.86 -1.67 -1.68 -1.83 -0.95 -1.22 -1.42 -1.25 -1.07 -1.75 -1.6 -1.38 -1.94 -1.96 -2.14 -2.41 -1.34 1.78 1.52 -2 -2.52 -2.46 -2.68 -1.88 -2.14 1.4 0.42 1.85 1.37 0.65 0.94 0.91 1.36 1.2 1.48 1.56 1.28 1.14 1.22 1.44 1.44 1.48 0.7 0.78 1.12 1.79 0.12 -1.42 2.19 0.99 0.86 0.48 0.71 1.15 0.65 0.16 -1.47 -0.84 1.84 1.69 1.34 1.38 1.77 1.81 1.59 1.78 1.84 1.55 1.75 1.66 2.13 1.87 2.06 1.92 2.19 2.12 2.11 1.22 1.76 1.76 0.79 0.9 0.56 0.56 1.6 -2.8 0.24 -2.14 -2.54 -2.79 -1.14 -2.17 0.5 0.9 -1.74 -1.63 -1.92 0.01 0.52 0.45 1 0.48 0.37 1.28 0.64 0.15 0.28 0.33 0.28 0.18 0.64 0.39 0.43 0.41 0.61 0.84 0.52 0.37 0.48 0.47 1 0.6 0.7 -0.09 0.6 0.82 1.43 0.53 0.34 0.24 -1.66 -0.17 0.16 0.52 1.4 -1.98 -2.14 -2.79 -2.79 -2.79 1.04 0.39 0.3 0.65 0.47 -0.23 -0.61 -1.97 -2.45 -2.42 -1.2 -0.7 -1.2 0.54 -1.08 -1.4 -0.26 -0.26 0 -0.33 -0.28 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


4.36 5.13
At3g48420 0.854
haloacid dehalogenase-like hydrolase family protein -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 2.91 2.95 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 2.62 1.36 2.16 3.14 1.12 2.09 2 2.17 1.84 2.39 2.43 2.37 1.96 1.83 2.29 2.54 2.63 2.04 1.6 2.37 3.44 -0.21 -0.33 2.81 0.79 1.19 0.9 0.89 1.49 -0.55 -0.34 -3.18 -3.18 3.1 3.01 3.02 3.1 3.18 2.9 3.01 3.07 3.12 2.86 3.12 2.97 3.11 2.88 3.11 3.29 3.39 3.84 3.67 2.71 3.44 3.14 1.89 2.4 1.93 -0.67 2.29 -3.18 2.1 -3.18 -3.18 -3.18 -3.18 -3.18 0.14 1.32 -3.18 -1.24 -3.18 3.21 1.44 0.67 2.46 1.73 1.23 1.94 0.33 -0.13 -0.42 0.09 -0.47 -0.61 0.85 -0.02 -0.52 -0.66 1.29 2 1.55 1 1.94 1.62 2.6 1.72 1.93 1.74 1.42 1.09 3 1.13 0.48 -0.02 -3.18 -0.92 0.4 1.21 3.16 -3.18 -3.18 -3.18 -3.18 -3.18 2.15 -0.01 2.22 1.66 1.19 -2.43 -3.18 -3.18 -3.18 -3.18 -2.25 -2.5 -3.18 -3.18 -2.14 -2.08 -1.68 -1.68 -3.18 -3.18 -1.18 At3g48420 252366_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




6.34 7.02
At1g06680 0.853 PSBP photosystem II oxygen-evolving complex 23 (OEC23). Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. -2.44 -2.66 -2.16 -1.96 -1.87 -2.06 -2 -2.22 -2.18 -2.04 -0.2 -2.25 -3.04 -2.36 -2.91 -2.88 -2.73 -2.68 -3.38 -2.95 -4.36 -1.97 -2.25 1.74 1.75 -3.16 -2.95 -3.08 -3.4 -3.26 -4.05 1.26 0.82 1.79 2.25 1.31 1.4 1.71 1.63 1.38 1.43 1.54 1.91 1.67 1.56 1.45 1.56 1.82 1.53 1.22 1.45 2.11 0.54 1.66 2.09 1.78 0.77 0.95 1.46 1.98 0.73 1.01 -2.13 -0.6 2 1.52 1.61 1.64 1.83 1.95 1.92 1.96 2.06 2.14 1.98 2.22 2.56 2.57 2.41 2.38 2.27 2.08 2.09 2.02 2.27 2.25 2.02 1.73 1.77 0.23 1.86 -4.67 1 0.64 -2.88 -4.59 0.4 -3.04 1.47 2.24 -2.8 -2.33 -3.01 2.41 1.76 1.15 1.34 1.22 0.92 1.57 1.02 0.54 0.69 0.89 0.6 0.43 0.88 0.75 0.4 0.37 1.04 1.24 1.07 0.78 1.1 1.02 1.59 0.89 1.11 1.46 1.08 1.01 1.67 0.54 0.75 0.45 -0.9 0.21 0.67 1.23 2.02 -2.79 -2.78 -3.69 -3.9 -3.83 1.79 0.73 1.59 1.39 1.35 1.13 0.77 -1.12 -2.46 -3.14 -2.76 -2.94 -3.05 -2.72 -2.96 -3.9 -1.36 -1.36 -3.32 -2.99 -1.56 At1g06680 262632_at PSBP photosystem II oxygen-evolving complex 23 (OEC23). Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. 10 extrinsic to photosynthetic water oxidation

Photosynthesis Photosystems | Photosystem II | Oxygen-evolving enhancer protein


5.65 7.24
At5g17230 0.853 PSY phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase -2.69 -2.69 -2.54 -2.69 -2.69 -2.69 -2.69 -2.69 -2.69 -2.69 -1.27 -1.53 -1.67 -1.47 -2.36 -1.96 -3.01 -2.69 -2.69 -2.82 -2.69 -1.5 -0.76 1.33 1.24 -2.17 -2.48 -1.32 -1.77 -0.73 -1.81 1.88 0.72 2.06 1.25 0.57 1.38 1.09 1.12 1.4 1.69 1.78 1.56 1.12 1.32 1.56 1.66 1.74 1.48 0.31 1.23 1.95 -0.06 -0.14 2.1 0.44 0.25 0.02 -0.11 0.14 1.12 0.38 0.27 -0.91 1.85 1.81 1.58 1.86 2.37 2.43 2.4 2.41 2.12 1.41 1.77 1.97 1.88 1.08 1.61 1.63 2.23 2.33 2.25 1.12 1.91 1.9 0.66 1.24 1.2 0.85 2.04 -2.54 -0.09 -1.45 -2 -2.06 -0.83 -1.52 0.5 0.61 -1.86 -1.75 -1.49 0.7 1.61 1.05 1.1 1.2 0.92 1.01 0.04 -0.38 -0.36 -0.19 -0.32 -0.31 0.23 0 -0.18 -0.21 0.53 1 1.07 1.92 0.61 1.2 1.17 0.69 1.04 0.44 0.31 0.37 1.46 1.52 1.42 1.97 1.72 2.54 0.56 1.32 2.06 -2.67 -2.8 -2.69 -2.25 -2.69 1.05 0.56 1.3 0.57 0.03 -0.64 -1.03 -1.62 -1.2 -1.55 -3.58 -3.01 -0.81 -0.47 -3.13 -3.27 -1.49 -1.49 -1.23 -1.05 -0.56 At5g17230 250095_at PSY phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase 8 carotenoid biosynthesis
carotenoid biosynthesis Glycan Biosynthesis and Metabolism | N-Glycan biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
4.80 6.12
At1g31330 0.852
photosystem I reaction center subunit III family protein -2.41 -3.02 -2.77 -2.06 -1.9 -2.15 -1.79 -2.25 -2.38 -2.37 -0.35 -2.09 -1.98 -1.85 -2.25 -1.85 -2.38 -3.78 -3.63 -3.06 -3.89 -0.63 -0.8 1.71 1.86 -2.49 -3.23 -3.36 -3.09 -3.44 -3.75 1.28 1.1 1.64 2.37 1.28 1.37 1.7 1.69 1.41 1.52 1.61 2 1.76 1.64 1.65 1.71 1.99 1.65 1.3 1.51 2.16 0.82 1.77 2.06 1.91 0.83 1.22 1.85 1.99 0.64 0.92 -1.78 -0.36 2.04 1.45 1.64 1.66 1.72 2.04 1.93 1.95 2.08 2.11 1.9 2.09 2.42 2.41 2.17 1.78 1.95 2.04 2.11 2.09 2.31 2.31 2.1 1.61 1.64 0.05 2.08 -4.4 1.05 0.73 -2.31 -4.5 0.18 -2.29 1.43 2.48 -3.38 -2.64 -2.1 2.52 1.87 1.76 1.67 1.43 1.13 1.8 1.4 0.97 0.78 0.91 0.83 0.57 1.1 0.89 0.73 0.65 1.1 1.33 1.12 0.79 1.14 1.24 1.46 1.12 1.31 1.52 1.25 0.96 1.63 0.69 0.97 0.59 -1.07 0.13 0.77 1.2 1.96 -3.04 -2.73 -3.32 -3.76 -2.82 1.46 0.28 1.74 1.44 1.38 1.38 1.12 -0.9 -2.27 -2.9 -5.04 -5.04 -3.29 -3.67 -5.04 -5.04 -2 -2 -5.08 -5.04 -2.86 At1g31330 262557_at
photosystem I reaction center subunit III family protein 2


Photosynthesis Photosystems | Photosystem I | photosystem I subunit precursor


6.01 7.61
At3g50820 0.851
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes -3.26 -3.26 -3.26 -3.26 -1.4 -3.26 -3.26 -3.26 -3.26 -3.26 0.67 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 0.51 -3.26 2.67 2.61 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 2.12 0.89 2.54 2.92 1.46 2.04 2.52 2.11 2.12 2.21 2.35 2.62 2.58 2.34 2.12 2.4 2.5 2.37 1.95 2.34 2.99 0.45 1.3 3.2 2.25 0.38 0.61 1.94 2.44 0.27 0.63 -3.26 -3.05 2.6 2.18 2.33 2.48 2.66 2.8 2.57 2.81 2.96 2.79 2.37 2.43 3.04 2.75 2.74 2.4 2.68 2.91 2.86 2.62 3.01 2.91 2.25 1.83 1.98 0.34 2.33 -3.26 1.96 1.1 -3.26 -3.26 -0.12 -3.26 0.39 1.4 -3.26 -2.44 -3.26 2.52 1.76 0.68 1.74 1.34 1.43 1.76 0.52 -0.71 0.11 0.56 -0.26 -0.38 0.87 0.44 0 -0.11 0.8 1.38 0.88 0.64 1.3 1.01 1.8 1.26 1.41 0.82 1.2 0.91 2.17 0.75 -0.16 -0.69 -2.43 -1.56 -0.53 0.69 2.62 -3.26 -3.26 -3.26 -3.26 -3.26 1.38 1.18 2.23 1.96 2.06 0.9 0.37 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.16 At3g50820 252130_at
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes 7 photosystem II assembly | photosystem II stabilization photosynthesis
Photosynthesis Photosystems | Photosystem II


6.11 6.46
At4g35250 0.851
low similarity to vestitone reductase (Medicago sativa subsp. sativa) -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.06 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.93 -2.25 -3.04 -1.9 0.55 3.1 3.29 -2.19 -2.45 -1.99 -3.04 -3.12 -2.04 2.47 0.18 2.89 2.23 0.97 2.04 1.77 1.33 1.08 1.56 2.27 2.18 1.95 1.27 1.21 1.77 2.33 1.63 2.52 2.77 2.7 0.65 0.02 3 1.22 0.02 -0.08 0.55 1.45 -0.12 -0.34 -1 -1.58 2.02 1.77 1.75 1.72 2.16 2.71 2.46 2.79 2.8 2.43 1.88 2.88 3.31 2.78 2.4 2.36 2.83 3.22 3.31 1.69 2.22 2.13 1.37 0.88 1.51 0.42 1.69 -3.23 -0.39 -3.04 -3.04 -3.04 -1.28 -1.45 -0.05 0.43 -1.47 -1.44 -1.37 0.94 1.24 -0.12 1.46 1.19 0.84 1.6 0.47 -0.3 -0.01 0.48 0.19 0.19 0.75 0.53 0.2 0.07 0.85 1.62 1.35 1.2 1.33 1.35 1.68 0.98 1.12 0.1 0.82 0.14 2.66 1.73 1.08 1.41 -1.36 0.77 -0.12 0.51 2.54 -3.04 -3.04 -3.04 -3.04 -3.04 0.56 -0.12 1.79 1.73 1.46 -0.05 -0.27 -2.77 -3.04 -3.04 -3.04 -3.04 -3.04 -1.56 -3.04 -3.04 -1.2 -1.2 -2.58 -2.47 -1.67 At4g35250 253197_at
low similarity to vestitone reductase (Medicago sativa subsp. sativa) 2

lysine biosynthesis I | colanic acid building blocks biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




5.86 6.55
At5g46110 0.851 APE2 mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator -4.2 -4.41 -3.66 -3.31 -3.95 -3.56 -3.51 -3.43 -4.05 -3.94 1.5 0.41 -0.99 -1.4 -1.88 -1.84 -2.87 -3.89 -3.7 -3.88 -3.62 -0.45 -1.39 1.96 1.99 -3.79 -4.2 -3.97 -4.47 -4.73 -5.11 1.53 0.72 1.79 2.02 1.38 1.6 1.94 1.7 1.59 1.67 1.79 2.13 1.98 1.71 1.68 1.82 2.02 1.7 1.47 1.54 2.1 0.9 1.15 2.54 2.17 0.67 0.72 1.86 2.29 0.89 1.34 -1.34 -0.42 2.08 1.62 1.79 1.89 2.02 2.16 2.06 2.12 2.27 2.25 1.99 2 2.36 2.25 2 1.93 2.09 2.31 2.35 1.83 2.13 2.11 2.25 1.71 1.82 0.63 1.95 -3.91 1.22 1.38 -1.9 -3.16 0.83 -3.23 1.3 2 -3.21 -2.88 -3.35 2.48 1.89 1.63 1.54 1.47 1.13 1.27 0.68 0.31 0.87 0.97 0.75 0.78 1.09 0.99 0.88 0.85 0.89 1.27 1.08 0.98 1.38 1.31 1.71 1.18 1.43 1.56 1.12 0.76 1.76 0.93 1.06 1.14 -0.78 1.22 0.81 1.22 1.91 -3.24 -3.09 -3.01 -2.8 -2.31 1.62 1.07 1.54 1.28 1.38 0.82 0.6 -1.29 -1.99 -2.48 -4.88 -4.8 -3.1 -1.03 -5.3 -5.13 -0.76 -0.76 -3.57 -3.61 -2.09 At5g46110 248886_at APE2 mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator 4
transported compounds (substrates) | C-compound and carbohydrate transport | transport facilitation

Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism


6.45 7.84
At1g44575 0.850 NPQ4 Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 -1.51 -0.84 -1.66 -1.54 -1.8 -1.77 -3.47 -3.47 -3.47 -3.47 -3.47 -3.09 1.6 1.92 1.64 -3.47 -3.47 -3.47 -3.47 -3.47 -3.47 1.58 0.98 1.87 2.22 1.34 1.74 2.08 1.59 1.74 1.85 1.86 2.2 1.96 1.67 1.84 2.16 2.39 1.86 1.36 1.85 2.29 0.47 0.72 2.45 0.71 1.27 1.29 0.64 1.22 0.24 0.76 -2.79 -2.27 2.18 1.77 1.8 1.84 1.79 1.99 2.08 2.2 2.27 2.1 2.04 1.93 2.31 2.15 2.21 2.06 2 2.27 2.24 2.04 2.54 2.39 1.54 1.86 1.83 -0.52 1.52 -3.47 0.64 1.15 -3.47 -3.47 -0.61 -3.03 1.01 2.34 -4.16 -3.48 -2.98 2.35 1.01 0.78 1.58 1.37 1.6 1.89 1.29 0.49 0.62 1.01 0.41 0.43 0.93 0.59 0.36 0.51 1.22 1.74 1.59 1.36 1.45 1.41 1.89 1 1.2 1.7 1.33 1.39 2.1 1.06 1.81 1.09 -0.08 0.65 1.04 1.42 2.27 -2.59 -1.89 -2.81 -2.81 -3.47 1.22 0.1 1.75 1.57 1.58 1.3 0.92 -0.93 -2.45 -3.47 -3.47 -3.47 -2.31 -2.29 -3.47 -3.47 -1.24 -1.24 -3.47 -3.47 -2.21 At1g44575 245213_at NPQ4 Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. 8 nonphotochemical quenching | PSII associated light-harvesting complex II | chlorophyll binding

Photosynthesis Photosystems | Photosystem II


5.75 6.70
At5g13630 0.850 GUN5 Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. -2.8 -3.34 -3.02 -2.8 -2.13 -2.29 -2.25 -2.47 -2.25 -2.59 -0.88 -0.98 -1.62 -1.39 -2.16 -1.94 -2.67 -3.1 -2.49 -2.08 -1.72 -2.8 0.79 2.49 2.34 -2.54 -3.24 -3.57 -2.93 -2.88 -3.84 2.29 0.15 2.54 2.41 1.33 2.04 1.96 1.52 0.54 1.37 2.17 2.35 2.12 1.34 0.95 1.5 2.29 1.68 1.8 2.46 2.58 0.63 -0.12 3.01 1.73 0.14 0.2 1.42 1.92 0.38 0.61 -1.46 -0.67 1.74 1.5 1.13 0.84 1.58 2.9 2.87 2.85 2.93 2.54 1.76 2.65 3.09 2.59 1.9 0.94 2.16 3.23 3.27 1.89 2.23 2.16 2.09 0.37 1.27 -0.67 1.84 -5.4 0.83 -1.68 -3.17 -5.75 0.25 -1.2 1.42 2 -2.57 -2.04 -1.12 2.43 1.7 0.56 1.88 1.37 0.73 1.84 1.03 0.39 0.87 1.06 1.03 0.8 1.32 0.96 0.84 0.81 1.33 1.62 1.31 0.94 1.85 1.78 2.47 1.62 1.73 1.47 1.33 1.52 2.08 0.63 1.11 0.47 -1.07 0.19 0.8 1.25 2.54 -3.53 -2.87 -3.7 -4.37 -3.79 1.99 0.64 1.78 1.77 1.7 1.2 0.71 -1.93 -3.31 -3.78 -5.94 -5.55 -3.69 -3.62 -5.86 -5.55 -2.04 -2.04 -4.86 -4.4 -2.83 At5g13630 250243_at GUN5 Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. 6

chlorophyll biosynthesis Porphyrin and chlorophyll metabolism



6.84 9.21
At5g47840 0.849
similar to Adenylate kinase, chloroplast (Zea mays) -0.83 -1 -1.38 -0.89 -0.87 -0.97 -0.92 -0.93 -0.72 -0.8 -0.36 -0.99 -0.88 -0.81 -0.96 -1.04 -0.8 -0.71 -0.87 -0.84 -0.99 -1.04 -1.32 0.96 1.12 -1.35 -1.53 -1.66 -1.54 -1.61 -1.66 0.8 -0.56 0.75 0.96 0.35 0.51 0.8 0.61 0.56 0.78 0.97 0.86 0.74 0.44 0.71 0.69 0.94 0.67 0.52 0.56 1.38 0.28 0.56 1.64 0.57 0.13 0.17 0.26 0.57 -0.15 0.03 -0.56 -0.9 0.89 0.93 0.8 0.84 1.11 1.43 1.06 1.2 1.18 0.83 0.73 1.22 1.23 1.19 1.13 1.09 1.36 1.39 1.47 1 1.36 1.3 0.81 0.69 0.72 -0.72 1.09 -0.64 -0.2 -0.22 -0.9 -1.1 -0.83 -1.34 0.03 0.68 -0.5 -0.52 -1.32 0.46 0.25 0.38 0.87 0.15 -0.03 0.62 0.02 -0.43 -0.19 -0.04 -0.32 -0.2 0.46 0.16 -0.09 -0.11 0.01 0.44 0.36 0.02 0.54 0.36 0.63 0.59 0.72 0.25 0.08 0.28 1.19 0.62 0.49 -0.1 0.01 -0.42 -0.08 0 1.12 -0.02 -0.03 -0.12 -0.07 0.03 0.11 -0.08 0.36 0.08 -0.06 -0.46 -0.71 -1.28 -1.43 -1.43 -1.71 -1.75 -1.8 -0.28 -1.85 -1.96 -0.76 -0.76 -0.91 -0.93 -0.24 At5g47840 248748_at
similar to Adenylate kinase, chloroplast (Zea mays) 4
nucleotide metabolism de novo biosynthesis of purine nucleotides I Nucleotide Metabolism | Purine metabolism



2.77 3.59
At1g60950 0.847 FED A encodes a ferredoxin gene -2.25 -2.73 -2.23 -2.15 -1.55 -1.5 -1.55 -1.46 -1.49 -1.13 0.07 -0.74 -2.15 -2.22 -2.92 -3.46 -3.34 -2.76 -2.49 -2.15 -3.01 -0.93 0.46 1.12 1.45 -3.7 -4.26 -4.42 -4.28 -4.63 -5.01 1.15 0.85 1.39 1.91 0.62 0.92 1.01 1.12 1.17 1.21 1.12 1.4 1.05 1.05 1.27 1.32 1.41 0.91 1.24 1.29 1.78 0.19 1.43 1.57 1.13 0.56 0.63 1.01 1.05 0.05 0.52 -1.94 -1.03 1.7 1.27 1.32 1.45 1.67 1.76 1.71 1.71 1.78 1.7 1.59 1.94 2.11 2.1 2.04 2.18 2.08 1.81 1.86 1.79 2 1.95 1.48 1.65 1.55 0.2 1.59 -3.33 0.98 1.32 -2.11 -3.7 -0.17 -1.51 1.01 1.88 -1.63 -1.12 -1.46 2.25 1.49 1.07 1.21 1.08 0.75 1.33 0.86 0.39 0.37 0.56 0.35 0.19 0.73 0.41 0.25 0.11 0.8 1.05 0.99 0.7 0.91 0.99 1.41 0.64 0.99 1.35 0.94 1.07 1.41 0.82 0.87 0.26 -0.62 -0.07 0.56 1.1 1.59 -1.6 -1.75 -3.96 -4.01 -4.38 1.4 0.52 1.38 1.19 1.17 1.12 0.79 -1.12 -2 -2.6 -2.22 -2.36 -1.98 -0.78 -2.09 -1.93 -1.09 -1.09 -1.33 -1 -0.55 At1g60950 259727_at FED A encodes a ferredoxin gene 4 response to light | photosynthetic electron transport

Photosynthesis Photosystems | Ferredoxin


5.63 7.28
At4g37930 0.847 SHM1 mitochondrial serine hydroxymethyltransferase, functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate -3.6 -3.45 -3.25 -2.76 -2.88 -2.88 -3.06 -2.94 -3.2 -3.7 -1.58 -1.02 -1.3 -1.4 -1.89 -2.02 -2.39 -3.28 -4.25 -3.9 -4.13 -4.7 -0.99 2.29 2.41 -4.26 -4.22 -4.22 -5.13 -4.22 -5.52 1.87 1.3 2.15 2.47 1.41 1.57 1.68 1.55 1.52 1.69 1.66 1.85 1.63 1.42 1.79 1.86 2.04 1.66 1.36 1.66 2.54 0.6 1.04 2.67 1.49 1.21 1.05 1.34 1.82 1.32 0.62 -4.16 -2.6 2.39 2.02 2.1 2.25 2.44 2.42 2.37 2.43 2.47 2.42 2.35 2.09 2.54 2.37 2.29 2.48 2.57 2.54 2.58 2.11 2.62 2.65 1.71 2.33 2.31 0.48 2.34 -2.85 0.75 -0.88 -2.43 -1.83 -0.04 -1.88 1 1.74 -1.91 -1.73 -1.68 2.77 1.92 2.06 1.58 1.47 1.47 1.24 0.31 -0.3 -0.7 -0.44 -0.94 -1.05 0.23 -0.36 -0.73 -0.56 0.88 1.49 1.24 1.32 1.47 1.57 1.54 1.12 1.32 1.58 0.94 1.08 2.19 1.95 0.1 1.07 -0.46 0.89 0.07 0.72 2.08 -1.43 -1 0.78 1.43 2.06 2.33 1.6 1.39 1.62 1.31 -1.41 -1.94 -3.77 -4.34 -4.8 -3.89 -4.75 -3.59 -1.09 -4.33 -4.25 -1.05 -1.05 -3.27 -3.26 -1.01 At4g37930 253009_at SHM1 mitochondrial serine hydroxymethyltransferase, functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate 6 glycine decarboxylation via glycine cleavage system | glycine hydroxymethyltransferase activity amino acid metabolism superpathway of serine and glycine biosynthesis II | glycine biosynthesis I | formylTHF biosynthesis | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | photorespiration Methane metabolism | Glycine, serine and threonine metabolism | Lysine degradation | Cyanoamino acid metabolism | One carbon pool by folate Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


6.77 8.29
At5g09660 0.846
encodes a microbody NAD-dependent malate dehydrogenase -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -1.07 -3.41 2.79 2.91 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 2.75 1.97 2.83 2.75 1.05 2.29 2.38 2.19 2.39 2.56 2.47 2.64 2.42 2.34 2.66 2.65 2.61 2.27 2.11 2.43 3.02 -0.43 2.24 3.33 2.54 1 1 2.24 2.73 0.57 0.2 -3.41 -3.41 3.12 2.85 2.9 2.97 3.16 3 3.24 3.31 3.3 3.05 3.14 2.64 3.05 2.56 2.93 3.13 3.13 3.39 3.45 2.43 3.25 3.29 2.38 2.69 2.72 1.54 3.19 -3.41 1.12 -0.88 -3.41 -3.41 -1.06 -3.41 1.1 1.84 -3.41 -3.41 -3.41 1.83 2.15 2 1.56 1.55 2.02 1.38 -0.12 -0.79 -1.35 -1.05 -1.73 -2.34 0.18 -1.4 -1.99 -1.7 0.79 1.74 1.48 1.33 1.5 1.15 1.47 1.4 1.67 0.76 1.07 0.54 2.85 2.29 -0.89 0.39 -2.5 -0.46 -0.15 0.72 2.65 -3.41 -3.41 -3.41 -3.41 -3.41 2.42 1.6 1.58 2.25 2.16 -2.12 -2.5 -3.41 -3.41 -3.41 -3.41 -3.41 -2.46 -1.29 -3.41 -3.41 -0.8 -0.8 -2 -2.25 -1.27 At5g09660 250498_at
encodes a microbody NAD-dependent malate dehydrogenase 6
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | biogenesis of chloroplast gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Pyruvate metabolism | Glyoxylate and dicarboxylate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


6.59 6.87
At3g12780 0.845 PGK1 phosphoglycerate kinase, putative -1.36 -1.47 -1.13 -1.01 -0.95 -1.01 -0.79 -0.98 -0.98 -0.93 -1.13 -0.9 -0.97 -0.97 -1.05 -1.03 -1.15 -1.32 -1.35 -1.51 -1.59 -2.66 -1.95 1.64 1.13 -1.73 -2.02 -2.45 -2.56 -2.45 -2.25 1.35 0.63 1.25 1.83 1.05 1.12 1.12 1.17 1.26 1.34 1.13 1.41 1.2 1.11 1.28 1.54 1.61 1.05 0.86 1.25 1.93 0.2 0.06 1.37 0.89 0.65 0.59 0.86 1.12 0.63 0.6 -1.93 -1.02 1.92 1.67 1.78 1.84 1.95 1.8 1.83 1.88 1.95 1.84 1.95 1.9 1.98 2 2.06 2.16 2.17 2.25 2.29 1.88 2.2 2.06 0.9 1.37 1.03 -0.32 1.2 -1.97 -0.1 -0.41 -2.02 -2.41 -1.02 -2.02 -0.16 0.9 -2.12 -1.91 -1.96 1.12 0.62 0.5 1.17 0.84 0.46 0.95 0.28 -0.39 -0.37 -0.19 -0.5 -0.77 -0.03 -0.04 -0.67 -0.71 0.28 0.8 0.61 0.33 0.47 0.34 1.22 0.44 0.75 -0.01 0.35 -0.1 1.44 0.36 0.42 0.11 -1.21 -0.41 -0.26 0.47 1.54 -2.02 -1.56 -3.02 -2.91 -3.51 0.74 -0.02 1.01 0.76 0.57 0.32 -0.1 -1.34 -1.91 -1.88 -1.93 -1.49 -1.49 -1.81 -1.64 -1.88 -0.95 -0.95 -3.05 -2.89 -1.29 At3g12780 256228_at (m) PGK1 phosphoglycerate kinase, putative 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | Calvin cycle | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis | Carbon fixation Intermediary Carbon Metabolism


4.41 5.80
At3g53920 0.845 SIGC Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme -0.69 -1.1 -0.56 -0.05 -0.71 -0.73 -0.55 -0.31 -0.9 -0.66 1.01 -0.16 -0.5 -0.5 -1.17 -0.78 -0.65 -0.94 -0.85 -0.04 -0.35 0.14 -0.24 0.83 1.47 -1.61 -1.61 -1.61 -1.61 -1.61 -1.61 0.9 0.34 0.74 0.61 0.14 -0.06 -0.24 0.6 0.24 0.56 0.36 0.21 0.05 0.23 0.63 0.56 0.32 -0.08 -0.04 0.15 1.23 0.22 -0.67 1.83 1.21 0.33 0.52 0.13 0.82 0.57 -0.14 -0.92 -0.57 1.22 1.47 0.93 1.08 1.63 1.71 1.02 1.25 1.11 1.02 1.37 1.05 1.06 1.09 1.25 1.38 1.46 1.39 1.52 1.07 1.03 1.04 0.78 0.79 0.23 1.13 1.57 -1.64 -0.4 -1.61 -1.61 -1.76 -0.38 -1.61 0.76 1.12 -1.59 -1.57 -1.61 -0.53 0.64 0.63 0.05 0.12 0.99 0.23 -0.31 -0.01 0.2 -0.12 -0.31 -0.01 0.36 0.16 -0.02 0.3 0.12 0.67 0.22 0.66 0.54 0.96 0.28 0.35 0.41 -0.4 0.11 0.56 1.12 0.87 -0.28 0.45 -0.06 0.63 0.05 0.13 0.91 -1.61 -1.19 0.98 0.61 -1.61 0.85 0.82 0.02 0.02 -0.69 -1.64 -1.72 -1.87 -1.75 -1.61 -1.14 -1.23 -1.34 -1.07 -1.47 -1.76 -0.64 -0.64 -1.04 -0.85 -0.98 At3g53920 251929_at SIGC Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme 10 photosynthesis, dark reaction | transcription initiation transcription | RNA synthesis | mRNA synthesis | transcriptional control
Transcription | RNA polymerase Transcription (chloroplast)


3.00 3.70
At4g39970 0.844
haloacid dehalogenase-like hydrolase family protein -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.36 1.93 1.84 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 1.75 0.7 1.12 2.52 0.68 0.68 1.1 1.18 0.81 1.3 1.19 1.12 1.23 1.33 1.13 1.12 1.37 1.05 0.78 1.22 1.95 0.34 1.14 1.76 0.34 0.22 0.38 0.25 0.22 -0.36 -1.83 -1.83 -1.83 2.2 2.31 2 2.06 2.15 2 2.02 2.19 2.37 2.62 2.31 2.18 2.49 2.67 2.54 2.36 2.62 2.92 3.05 1.87 2.31 2.18 1.75 1.1 0.81 -0.08 1.38 -1.83 0.19 0.06 -1.83 -1.83 -1.83 -1.83 -0.07 0.74 -1.83 -1.83 -1.83 1.01 0.44 1.01 2.04 0.33 0.73 1.08 -0.06 -0.65 -1.14 -1.64 -1.69 -2.1 0 -1.1 -1.2 -1.3 0.24 0.95 0.88 0.19 1.06 0.8 1.86 1.34 1.66 0.13 0.82 1.03 1.88 0.47 0.95 0.2 -0.65 -0.17 0.18 0.47 1.79 -1.83 -1.83 -1.83 -1.83 -1.83 1.65 0.14 1.23 0.28 0.03 -0.83 -1.35 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.04 -1.83 -1.83 -0.51 -0.51 -1.83 -1.83 -1.67 At4g39970 252876_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




4.19 5.14
At3g26650 0.843 GAPA glyceraldehyde 3-phosphate dehydrogenase A, chloroplast (GAPA) / NADP-dependent glyceraldehydephosphate dehydrogenase subunit A -3.34 -3.92 -3.08 -2.65 -2.58 -2.43 -2.9 -3.02 -2.93 -2.89 -0.38 -1.81 -2.91 -2.29 -2.84 -2.7 -3.37 -3.75 -4.23 -3.35 -4.63 -1.83 -1.48 1.83 1.86 -2.94 -3.53 -3.16 -3.4 -3.35 -4.01 1.56 1.22 1.9 2.04 1.53 1.11 1.5 1.35 1.57 1.79 1.36 1.62 1.49 1.41 1.6 1.68 1.76 1.32 1.54 1.51 2.2 0.73 1.4 2.15 1.68 0.94 0.96 1.3 1.81 0.99 1.05 -1.95 -0.34 2.1 1.63 1.67 1.94 2.16 2.31 2.06 2.09 2.15 2.09 1.93 2.38 2.31 2.16 2.44 2.68 2.52 2.12 2.19 2.27 2.45 2.45 2.02 2 1.86 0.98 2.2 -4.51 0.02 0.61 -2.47 -5.44 0.91 -4.48 1.74 2.33 -4.13 -3.32 -4.47 2.52 1.91 1.34 1.6 1.5 0.78 1.81 1.07 0.81 0.74 1.03 0.67 0.74 0.99 0.64 0.52 0.33 1.43 1.73 1.51 1.28 1.27 1.33 1.83 1.19 1.33 1.65 1.19 0.83 1.9 1.05 1.12 0.43 -0.81 -0.03 1.03 1.55 2.08 -2.88 -2.41 -3.24 -3.8 -4.9 2 1.71 1.74 1.49 1.47 1.02 0.89 -0.66 -2.06 -2.63 -3.1 -3.33 -2.84 -1.76 -3.31 -4.51 -0.19 -0.19 -3.7 -3.89 -0.51 At3g26650 257807_at GAPA glyceraldehyde 3-phosphate dehydrogenase A, chloroplast (GAPA) / NADP-dependent glyceraldehydephosphate dehydrogenase subunit A 10 glyceraldehyde-3-phosphate dehydrogenase activity C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Carbon fixation Intermediary Carbon Metabolism


6.43 8.12
At1g10960 0.842
Strong similarity to FERREDOXIN PRECURSOR from Arabidopsis thaliana -1.9 -1.73 -0.55 -0.64 -0.85 -0.87 -0.92 -0.95 -0.8 -0.79 -0.3 0.79 -0.23 -0.17 -0.5 -0.84 -1.12 -0.41 -1.99 -2.44 -3.35 -1.26 0.81 1.78 1.17 -2.37 -2.11 -1.87 -2.04 -1.83 -2.72 1.66 0.2 1.76 1.48 1.61 0.95 0.43 0.66 1.19 1.44 1.22 1.05 0.4 0.88 1.32 1.52 1.4 0.46 1.6 1.7 1.56 -0.56 0.31 1.64 0.14 0.68 1.17 0.24 0.11 0.1 0.56 -2 -0.94 1.53 1.32 1.15 1.07 1.2 1.2 1.46 1.93 1.81 0.75 1.12 1.51 1.8 1.12 1.98 1.64 1.64 2.22 2.08 1.31 1.98 1.8 1.3 1.2 0.74 -1.86 0.95 -4.55 -0.59 -0.63 -2.96 -4.29 -2.02 -0.16 -0.2 0.24 -0.74 -0.42 -0.21 1.28 -0.12 0.28 0.87 -0.11 1.81 1.5 0.75 0.5 -0.53 0.02 -0.5 -0.15 0.37 0.42 0.24 0.2 0.69 1.08 0.91 0.3 0.85 1.03 1.61 0.47 0.62 0.79 0.31 0.5 1.59 0.61 0.92 -0.14 -1.14 -0.48 0.36 0.62 1.34 -2.21 -2.47 -3.73 -3.8 -3.78 0.31 -0.18 1.2 1.23 1.26 1.35 0.5 -1.67 -2.6 -3.56 -3.34 -3.31 -0.74 1.08 -3.28 -1.41 -0.93 -0.93 -2.04 -1.83 0.9 At1g10960 260481_at
Strong similarity to FERREDOXIN PRECURSOR from Arabidopsis thaliana 6


Photosynthesis Photosystems | Ferredoxin


5.10 6.78


























































































































































































page created by Alexandre OLRY 05/24/06